marker_id species_id marker_name sub_number marker_type mapped_genome_id reference_seq_name chr fwd_primer_seq fwd_primer_start_pos fwd_primer_end_pos rev_primer_seq rev_primer_start_pos rev_primer_end_pos target_seq target_chr target_start_pos target_end_pos allele enzyme comments doi pubmed f_active assembly_version t4113.M000002.1 t4113 Zep 1 Others t4113.G002 SolTub_3.0 2 GTGGTTCTTGAGAATGGACAAC 43805941 43805962 CACCAGCTGGTTCATTGTAAAA 43806524 43806503 NA 535 bp [Andean Sunrise]; 584 bp [NA]; 535 bp [Papa Pura]; 535 bp [Yema de Huevo] NA 10.1007/s11103-010-9647-y 20490894 1 SolTub_3.0 t4113.M000016.1 t4113 contig237 1 Others t4113.G002 SolTub_3.0 4 CTTACTTGGGCAACCCAGAAT 5271561 5271581 GCAGTCCTAATTGCACGTAACA 5271983 5271962 NA Contig237-a [C1992/31 (male parent, tetraploid)]; position 119: AAA/T [C1992/31 (male parent, tetraploid)]; absent [Record (female parent, tetraploid)]; position 119: AAAA [Record (female parent, tetraploid)] NA 10.1007/s00122-009-1185-0 19882336 1 SolTub_3.0 t4113.M000017.1 t4113 Bac8_15 1 Others t4113.G002 SolTub_3.0 4 TCCTCTCTGGTCAGTGTTGG 5255658 5255677 GAGAATCTCACGGTGGTGGT 5256216 5256197 NA position 241: TTT/A [C1992/31 (male parent, tetraploid)]; position 241: TTTT [Record (female parent, tetraploid)] NA 10.1007/s00122-009-1185-0 19882336 1 SolTub_3.0 t4113.M000018.1 t4113 BAC9_3 1 Others t4113.G002 SolTub_3.0 4 TGCAGAGGTCAGTTGTTTGG 6592814 6592833 CGCCAACTCTGCTTCATACA 6593463 6593444 NA position 45: CCC/G [C1992/31 (male parent, tetraploid)]; position 87: TTT/A [C1992/31 (male parent, tetraploid)]; position 45: CCCC [Record (female parent, tetraploid)]; position 87: TTTT [Record (female parent, tetraploid)] NA 10.1007/s00122-009-1185-0 19882336 1 SolTub_3.0 t4113.M000028.1 t4113 GBSS1-3 1 Others t4113.G002 SolTub_3.0 8 TGCAAGAGCTCTAGCAACTG 56782804 56782823 AAAGGAGGCTCTTCAAGCAG 56783655 56783636 NA NA NA 10.1270/jsbbs.62.142 23136525 1 SolTub_3.0 t4113.M000030.1 t4113 PRK 1 Others t4113.G002 SolTub_3.0 5 CCCTTTTGCCAGTTCATCC 5946418 5946436 ACTTGAAATGATAACAGGTAGGAG 5947006 5946983 NA NA NA 10.1007/s00122-008-0925-x 19020852 1 SolTub_3.0 t4113.M000033.1 t4113 GP179 1 Others t4113.G002 SolTub_3.0 5 CCCATGGCTACATGCATTATGTATT 5947953 5947977 TCCTCCTTTGAAATATGTTTCACTTCTA 5948143 5948116 NA NA NA 10.1007/s00122-008-0925-x 19020852 1 SolTub_3.0 t4113.M000041.1 t4113 RH121J02 1 Others t4113.G002 SolTub_3.0 5 GCTCCTGCATTTGCCGCCATTTTCAT 4727653 4727678 TGTTGGTTTCCACCCGGTGTCCGATA 4727957 4727932 NA NA NA 10.1038/nature11912 23467094 1 SolTub_3.0 t4113.M000042.1 t4113 Mando 1 Others t4113.G002 SolTub_3.0 5 GCCCCTTCGACACAATCTCC 4670272 4670291 CCAGTTGCTGGGGTCCTTTC 4670507 4670488 NA NA NA 10.1038/nature11912 23467094 1 SolTub_3.0 t4113.M000043.1 t4113 TERF1 1 Others t4113.G002 SolTub_3.0 5 ATCGCGTTCGAATCCCAAAC 4620607 4620626 TGAACGTTCGGCAATTGGTC 4620937 4620918 NA NA NA 10.1038/nature11912 23467094 1 SolTub_3.0 t4113.M000044.1 t4113 Zinc 1 Others t4113.G002 SolTub_3.0 5 CCTTCTTCCCATGGCACACAC 4502321 4502341 TTCAATACCCTTGTCCATGTGC 4502676 4502655 NA NA NA 10.1038/nature11912 23467094 1 SolTub_3.0 t4113.M000058.1 t4113 PHO1A 1 Others t4113.G002 SolTub_3.0 00 agccaatcttcagccacctc 40932074 40932093 tgccgcatctattacctcaa 40932971 40932952 NA type (a-c) [NA] MseI 10.1186/1471-2164-12-7 21208436 1 SolTub_3.0 t4113.M000060.1 t4113 S1b3 1 Others t4113.G002 SolTub_3.0 3 ATGTTTGTCAACTGTGCTGCGG 57570692 57570713 AATTAGTAATTAGTAATTACCTCAGAG 57571018 57570992 NA 175: A/G [NA] NA AATTAGTAATTAGTAATTACC TCAGAG 10.1534/genetics.108.094268 19139145 1 SolTub_3.0 t4113.M000061.1 t4113 GP321 1 Others t4113.G002 SolTub_3.0 2 GCACAAAACAAACCAACGCAA 29487705 29487725 TCACCTTGTTATCTCCTATGC 29488546 29488526 NA NA NA 10.1534/genetics.108.094268 19139145 1 SolTub_3.0 t4113.M000063.1 t4113 St4cl 1 Others t4113.G002 SolTub_3.0 3 CTAGCGTATCAGCACATGGATGGT 57468743 57468766 GATCCTTTTGCCTAATTGCCCTGA 57469605 57469582 NA NA NA 10.1534/genetics.108.094268 19139145 1 SolTub_3.0 t4113.M000064.1 t4113 StSGT1-2 1 Others t4113.G002 SolTub_3.0 3 CAGCAAAGCTTTGGCATAAAACC 49490697 49490719 AGAATGTGATGAACGCATTGCAG 49491286 49491264 NA NA NA 10.1534/genetics.108.094268 19139145 1 SolTub_3.0 t4113.M000065.1 t4113 StEDS1 1 Others t4113.G002 SolTub_3.0 6 TTCAGATTACATGCAGCATAGC 52123149 52123170 ACTCATTTCCTCTACATTTCATCC 52124752 52124729 NA NA NA 10.1534/genetics.108.094268 19139145 1 SolTub_3.0 t4113.M000066.1 t4113 BA228g19t7 1 Others t4113.G002 SolTub_3.0 7 CTGCATATATTGTCAAGGTACATC 40876702 40876725 TCTCAGTTCTACCATCATCAAGA 40877215 40877193 NA NA NA 10.1534/genetics.108.094268 19139145 1 SolTub_3.0 t4113.M000069.1 t4113 CP105 1 Others t4113.G002 SolTub_3.0 10 TAAGCTCCCCAAGTCATTGCAGG 53944666 53944688 GCCGAACTTGTTTCACATAACATG 53945103 53945081 NA NA NA 10.1534/genetics.108.094268 19139145 1 SolTub_3.0 t4113.M000070.1 t4113 BA81l15t3 1 Others t4113.G002 SolTub_3.0 10 CTGTTGGGTCTTCCTATAAGTTGG 58645515 58645538 TGAAACCACTAAACATGACATTTTG 58645778 58645754 NA NA NA 10.1534/genetics.108.094268 19139145 1 SolTub_3.0 t4113.M000071.1 t4113 POT33 1 Others t4113.G002 SolTub_3.0 8 gttacggacttgttgattacg 45889512 45889532 ctcctatgccaactaactttg 45889960 45889940 NA type (a-g) [NA] TaqI 10.1186/1471-2164-12-7 21208436 1 SolTub_3.0 t4113.M000072.1 t4113 STRBOHA 1 Others t4113.G002 SolTub_3.0 8 ggatacggtatcttccggcaag 55364829 55364850 gctcgagctgctaaagccgaatc 55365314 55365292 NA type (a-d) [NA] MseI 10.1186/1471-2164-12-7 21208436 1 SolTub_3.0 t4113.M000073.1 t4113 STRBOHB 1 Others t4113.G002 SolTub_3.0 1 cccctccttttgctacagag 77344838 77344855 ccgcggtgactaaagatgag 77345914 77345895 NA NA MseI 10.1186/1471-2164-12-7 21208436 1 SolTub_3.0 t4113.M000075.1 t4113 HCT 1 Others t4113.G002 SolTub_3.0 3 ggctgtggaactctaatgtag 57304957 57304977 ggagctgtagttaacggtatttc 57307492 57307470 NA type (a-f) [NA] MseI 10.1186/1471-2164-12-7 21208436 1 SolTub_3.0 t4113.M000076.1 t4113 HCT-1 1 Others t4113.G002 SolTub_3.0 3 gctctagtccgcggtgcacatacat 57307790 57307814 ctaagccatccgcggttccaatcta 57308332 57308308 NA type (Alu-a to Alu-e) [NA]; type (Taq-a to Taq-d) [NA] AluI, TaqI 10.1186/1471-2164-12-7 21208436 1 SolTub_3.0 t4113.M000077.1 t4113 DHS 1 Others t4113.G002 SolTub_3.0 4 tcaaccccttctgccttctcctt 63992176 63992198 ctcggcagctttacaccatcctt 63993160 63993138 NA type (a-f) [NA] MseI 10.1186/1471-2164-12-7 21208436 1 SolTub_3.0 t4113.M000078.1 t4113 LOX 1 Others t4113.G002 SolTub_3.0 8 atctggatgtggcaaactca 6047009 6047028 tttgatggtacccctaacga 6047861 6047842 NA type (a-e) [NA] MseI 10.1186/1471-2164-12-7 21208436 1 SolTub_3.0 t4113.M000080.1 t4113 PHO2-1 1 Others t4113.G002 SolTub_3.0 00 catccccagggtagagaacag 18211042 18211062 atggggttatggcttgaggta 18211844 18211824 NA type (1a-1d) [NA] MseI 10.1186/1471-2164-12-7 21208436 1 SolTub_3.0 t4113.M000081.1 t4113 PHO2-2 1 Others t4113.G002 SolTub_3.0 00 gacgcccagaatatttagaagc 18207898 18207919 gcccagctgcatagtgacat 18208407 18208388 NA type (2a-2e) [NA] TaqI 10.1186/1471-2164-12-7 21208436 1 SolTub_3.0 t4113.M000082.1 t4113 CIL 1 Others t4113.G002 SolTub_3.0 12 agccctggcagttacgatggt 59995985 59996005 tggggaacttggtggacgag 59997039 59997020 NA type (a-c) [NA] MseI 10.1186/1471-2164-12-7 21208436 1 SolTub_3.0 t4113.M000084.1 t4113 LIPIII-26 1 Others t4113.G002 SolTub_3.0 2 gagatctccaatttaaggc 32410003 32410021 caaagccacatgatttagc 32410438 32410420 NA type (a,b) [NA] TaqI 10.1186/1471-2164-12-7 21208436 1 SolTub_3.0 t4113.M000085.1 t4113 CAT 1 Others t4113.G002 SolTub_3.0 2 gcaggctttcgggatgatgaga 38569987 38570008 agaggtcccgtgttgcttgagg 38570962 38570943 NA type (a-d) [NA] TaqI 10.1186/1471-2164-12-7 21208436 1 SolTub_3.0 t4113.M000101.1 t4113 45/XI 1 Others t4113.G002 SolTub_3.0 11 AGAGAGGTTGTTTCCGATAGACC 42774434 42774456 TCGTTGTAGTTGTCATTCCACAC 42775755 42775733 NA 1500 bp [Maris Piper (MP)]; 900, 1500 bp [Sárpo Mira (SM, female parent)] NA 10.1007/s00122-013-2248-9 24343200 1 SolTub_3.0 t4113.M019963.1 t4113 St3.3.11 1 Others t4113.G002 SolTub_3.0 11 GCTAAGCTGGGATTGTTGTCT 15417652 15417672 TACTGTGCCACCCGTTGAG 15418032 15418014 NA not amplified [RH89-039-16 (RH, paternal clone)]; amplified [SH83-92-488 (SH, maternal clone)] NA 10.1094/MPMI.2004.17.4.428 15077675 1 SolTub_3.0 t4113.M019967.1 t4113 GP39 1 Others t4113.G002 SolTub_3.0 9 TTTTTGCTTCTACCTTCTG 8474237 8474255 TTGGCTAATACCCTTTCA 8475133 8475116 NA NA NA 10.1007/s00122-006-0224-3 16453130 1 SolTub_3.0 t4113.M019995.1 t4113 TG230 1 Others t4113.G002 SolTub_3.0 10 CATGGAATGGGGAGAAGTAAG 1324588 1324608 GTCCAAACAACAGAGCAGCA 1324937 1324918 NA NA NA 10.1007/s10681-015-1558-1 NA 1 SolTub_3.0 t4113.M020001.1 t4113 TG393 1 Others t4113.G002 SolTub_3.0 11 GGTTACATCTTGCTCCATCACC 45233895 45233915 AGTACCATCTCCTCCAGCTCAA 45234225 45234204 NA NA NA 10.1007/s10681-015-1558-1 NA 1 SolTub_3.0 t4113.M020002.1 t4113 TG424 1 Others t4113.G002 SolTub_3.0 9 GTCCCAATTTGTGGCACACT 56931231 56931250 AGGGGATGTGGAAATCGTGT 56931631 56931612 NA NA NA 10.1007/s10681-015-1558-1 NA 1 SolTub_3.0 t4113.M020003.1 t4113 TG499 1 Others t4113.G002 SolTub_3.0 7 GCCTAGGGGATGTGCAAAGG 56643913 56643932 GTTCTGGCATCGGCCTTG 56644383 56644366 NA NA NA 10.1007/s10681-015-1558-1 NA 1 SolTub_3.0 t4113.M020057.1 t4113 Pha2 1 Others t4113.G002 SolTub_3.0 7 caaacatgtacccgtcagcatc 10837314 10837335 agctatcaggcattggagatgg 10838195 10838174 NA NA TaqI 10.1007/s001220051645 NA 1 SolTub_3.0 t4113.M020205.1 t4113 POLOXB 1 Others t4113.G002 SolTub_3.0 8 ctgacattcaacaaag 45632335 45632349 ttctgttatcgccagct 45632529 45632513 NA NA NA 10.1186/1471-2164-12-7 21208436 1 SolTub_3.0 t4113.M020206.1 t4113 LIPIII-27 1 Others t4113.G002 SolTub_3.0 2 atagggggattttgtggtgtca 33058747 33058768 gtcaagggaagcatggagtaagg 33059461 33059439 NA type (a-e) [NA] AluI 10.1186/1471-2164-12-7 21208436 1 SolTub_3.0 t4113.M020207.1 t4113 4CL-2 1 Others t4113.G002 SolTub_3.0 3 gcaaatgccaaacacatcgc 57468357 57468376 ggagcaatttcaacaatggc 57469547 57469528 NA type (2a-2e) [NA] ApoI 10.1186/1471-2164-12-7 21208436 1 SolTub_3.0 t4113.M020208.1 t4113 4CL-1 1 Others t4113.G002 SolTub_3.0 3 tcggggtggttgataagaagagc 57467367 57467389 aggggcatgtggtactgttgtga 57468332 57468310 NA type (1a-1f) [NA] MseI 10.1186/1471-2164-12-7 21208436 1 SolTub_3.0 t4113.M020209.1 t4113 G6pdh-4 1 Others t4113.G002 SolTub_3.0 2 cacaatgaaagatgggaagg 47734933 47734952 ttgcacataggcagggtact 47736862 47736843 NA NA NA 10.1007/s00122-008-0746-y 18379755 1 SolTub_3.0 t4113.M020210.1 t4113 HQT-2 1 Others t4113.G002 SolTub_3.0 7 ggcctaccccatccaaaatcacact 1002171 1002195 gcacgggacccaccaacatcttct 1002745 1002722 NA type (2a-2d) [NA] AluI 10.1186/1471-2164-12-7 21208436 1 SolTub_3.0 t4113.M020211.1 t4113 ZEP 1 Others t4113.G002 SolTub_3.0 2 ggacttccctacagagtta 43804792 43804810 ccatcatcctcaaagtctac 43805774 43805755 NA type (a-c) [NA] MseI 10.1186/1471-2164-12-7 21208436 1 SolTub_3.0 t4113.M020213.1 t4113 LIPIII-27-1 1 Others t4113.G002 SolTub_3.0 2 aaccatcccattgtgcttctcg 33058537 33058558 gtgatgggggtttacttcctttgt 33059282 33059259 NA type (1a-1h) [NA] AluI 10.1186/1471-2164-12-7 21208436 1 SolTub_3.0 t4113.M020214.1 t4113 HQT 1 Others t4113.G002 SolTub_3.0 7 gaggttagggctagcaaagt 1002230 1002249 gctagggatgaacaaggtag 1005894 1005875 NA type (a-f) [NA] MseI 10.1186/1471-2164-12-7 21208436 1 SolTub_3.0 t4113.M020215.1 t4113 C4H 1 Others t4113.G002 SolTub_3.0 6 aggggatcatcttcactctcaaat 57653334 57653357 ttccctcctataaatcctcacact 57654033 57654010 NA type (a-f) [NA] AluI 10.1186/1471-2164-12-7 21208436 1 SolTub_3.0 t4113.M020216.1 t4113 GLDH 1 Others t4113.G002 SolTub_3.0 10 gaagccttgcagcatgtccgagat 58309870 58309893 gcttgcgtcatatgcctgtagtgg 58311733 58311710 NA type (a-i) [NA] AluI 10.1186/1471-2164-12-7 21208436 1 SolTub_3.0 t4113.M020217.1 t4113 PME 1 Others t4113.G002 SolTub_3.0 3 ctccacggcttgatcaaactaacca 61693808 61693832 ttcttggcccgggacataacct 61694582 61694561 NA type (a-c) [NA] TaqI 10.1186/1471-2164-12-7 21208436 1 SolTub_3.0 t4113.M020218.1 t4113 PHO1B-1 1 Others t4113.G002 SolTub_3.0 5 caatggcgacactaaactaccc 348580 348601 aagcgactcgtcacctggat 349473 349454 NA type (1a-1g) [NA] AluI 10.1186/1471-2164-12-7 21208436 1 SolTub_3.0 t4113.M020219.1 t4113 PHO1B 1 Others t4113.G002 SolTub_3.0 5 gtcgcatacactaaccacact 349857 349877 tgcccgctaactacacata 350484 350466 NA type (a-f) [NA] AluI 10.1186/1471-2164-12-7 21208436 1 SolTub_3.0 t4113.M020220.1 t4113 HQT-1 1 Others t4113.G002 SolTub_3.0 7 ggcctaccccatccaaaatcacact 1002171 1002195 tcccccacctaccctcaactcatca 1002701 1002677 NA type (1a-1f) [NA] AluI 10.1186/1471-2164-12-7 21208436 1 SolTub_3.0 t4113.M020221.1 t4113 CAT2-1 1 Others t4113.G002 SolTub_3.0 12 tttgcatacattcgccttcttcta 57456556 57456579 tcgcgatgattgttgtgatgac 57457143 57457122 NA type (1a-1e) [NA] MseI 10.1186/1471-2164-12-7 21208436 1 SolTub_3.0 t4113.M020222.1 t4113 CIS 1 Others t4113.G002 SolTub_3.0 1 gtccggctaaaccattcaaa 66941467 66941486 tcaattggggaacatcacagt 66944798 66944778 NA type (a-d) [NA] ApoI 10.1186/1471-2164-12-7 21208436 1 SolTub_3.0 t4113.M020262.1 t4113 StAOS2 1 Others t4113.G002 SolTub_3.0 11 TTGATGTTCTTCCTTCTTTCTTC 41832546 41832568 GCGGATTTTACTTCCGATCGGAT 41833114 41833092 NA 678: A/G, 681: T/A, 691: A/G, 692: C/G, 727: C/T, 744: A/G, 774: C/T, 879: A/G, 900: A/T, 954: C/T [NA] NA 10.1534/genetics.108.094268 19139145 1 SolTub_3.0 t4113.M020263.1 t4113 StSGT1-1 1 Others t4113.G002 SolTub_3.0 3 ACCAATTAACAGAAACACAGG 49492684 49492704 GCCGTTGACCTCTACACTC 49493110 49493092 NA 169: T/C [NA] NA 10.1534/genetics.108.094268 19139145 1 SolTub_3.0 t4113.M020264.1 t4113 P4H6 1 Others t4113.G002 SolTub_3.0 5 GAGGCATATACTTGTAAAACGTCG 1505216 1505239 CGATCGTCTGAGATGGACCATTGT 1505747 1505726 NA 248: G/C [NA] NA 10.1534/genetics.108.094268 19139145 1 SolTub_3.0 t4113.M020267.1 t4113 GP122 1 Others t4113.G002 SolTub_3.0 12 GCACTCAATAGCCCTTCTT 59698341 59698359 TATTTTAGGGGTACTTCTTTCTTA 59699056 59699034 NA 231: T/A, 440: G/T [NA] NA 10.1534/genetics.108.094268 19139145 1 SolTub_3.0 t4113.M020268.1 t4113 BA106c14t7 1 Others t4113.G002 SolTub_3.0 4 GTACATTGTTAGCTGCTGAATCATGTTACC 1735498 1735527 CTCTCAGTTCCTCCTCCGCGTGCAA 1736126 1736102 NA 300: T/G [NA] NA 10.1534/genetics.108.094268 19139145 1 SolTub_3.0 t4113.M020270.1 t4113 StAOS1 1 Others t4113.G002 SolTub_3.0 4 GCTTCATCAAGAACGGAAGTTG 69090113 69090134 AATTCATCGTCTCATCATGTTAG 69090972 69090950 NA 803: A/G [NA] NA 10.1534/genetics.108.094268 19139145 1 SolTub_3.0 t4113.M020271.1 t4113 ORF3 1 Others t4113.G002 SolTub_3.0 5 TTGCTTGAACATGATCCACAC 4936207 4936227 GCTTAGTTTCCTCTGGCACC 4937013 4936994 NA 93: C, 143: T, 433: A, 438: G, 472: A, 520: A, 596: T, 611: A or G [NA]; 93: T, 143: C, 433: C, 438: C, 472: T, 520: G, 596: A, 611: T [NA] NA 10.1007/s00122-008-0925-x 19020852 1 SolTub_3.0 t4113.M020273.1 t4113 ORF12 1 Others t4113.G002 SolTub_3.0 4 ACCTTTTTAGCTTTGATACGTTG 54366430 54366452 CGATGAATATGAAGATGAAGC 54366902 54366882 NA NA NA 10.1007/s00122-008-0925-x 19020852 1 SolTub_3.0 t4113.M020273.2 t4113 ORF12 2 Others t4113.G002 SolTub_3.0 9 CGATGAATATGAAGATGAAGC 37430789 37430809 ACCTTTTTAGCTTTGATACGTTG 37431214 37431192 NA NA NA 10.1007/s00122-008-0925-x 19020852 1 SolTub_3.0 t4113.M020277.1 t4113 Stp23-8 1 Others t4113.G002 SolTub_3.0 00 cacctcctcctgaccatctt 40932088 40932107 gcaacagctcaaagtgttcg 40932880 40932861 NA NA NA 10.1007/s00122-008-0746-y 18379755 1 SolTub_3.0 t4113.M020278.1 t4113 Pain1-5 1 Others t4113.G002 SolTub_3.0 3 cggaattggattgtggaattg 39257704 39257724 tggcgttagctcagatagctt 39258501 39258483 NA NA NA 10.1007/s00122-008-0746-y 18379755 1 SolTub_3.0 t4113.M020279.1 t4113 Pain1-8 1 Others t4113.G002 SolTub_3.0 3 gccgtcaagaggtgtttctc 39255356 39255375 acccagtccagacaccgtta 39257181 39257163 NA NA NA 10.1007/s00122-008-0746-y 18379755 1 SolTub_3.0 t4113.M020280.1 t4113 Pain1-9 1 Others t4113.G002 SolTub_3.0 3 gatcaaaagctatctgagctaacg 39258475 39258498 aagctctccacaattgagtggt 39258919 39258898 NA NA NA 10.1007/s00122-008-0746-y 18379755 1 SolTub_3.0 t4113.M020282.1 t4113 SssI-11 1 Others t4113.G002 SolTub_3.0 3 aagagtggtccacaaataccc 48228400 48228419 tggtggattaggagatgtttg 48229112 48229092 NA NA NA 10.1007/s00122-008-0746-y 18379755 1 SolTub_3.0 t4113.M020287.1 t4113 Amy-3 1 Others t4113.G002 SolTub_3.0 4 gctaagatcctctgttggcttc 71335060 71335081 cttgattcctccgaatagca 71336982 71336963 NA NA NA 10.1007/s00122-008-0746-y 18379755 1 SolTub_3.0 t4113.M020288.1 t4113 StpL-3 1 Others t4113.G002 SolTub_3.0 5 gttcagagacatcatggcaac 346755 346775 agtccagaaagcaagaagca 348579 348560 NA NA NA 10.1007/s00122-008-0746-y 18379755 1 SolTub_3.0 t4113.M020289.1 t4113 Sut2-3 1 Others t4113.G002 SolTub_3.0 5 gtgtcagagaaggtgcatttg 5693309 5693329 caaccaaaatggaagccagt 5694400 5694381 NA NA NA 10.1007/s00122-008-0746-y 18379755 1 SolTub_3.0 t4113.M020290.1 t4113 Sut2-5 1 Others t4113.G002 SolTub_3.0 5 ggctatgcggtcctattactg 5690125 5690145 caagatcgagcatccaaaac 5691015 5690996 NA NA NA 10.1007/s00122-008-0746-y 18379755 1 SolTub_3.0 t4113.M020291.1 t4113 Sut2-6 1 Others t4113.G002 SolTub_3.0 5 gttttggatgctcgatcttg 5690996 5691015 gagatttccacatggctcac 5691642 5691623 NA NA NA 10.1007/s00122-008-0746-y 18379755 1 SolTub_3.0 t4113.M020292.1 t4113 Sut2-7 1 Others t4113.G002 SolTub_3.0 5 gttgtgagccatgtggaaatc 5691620 5691640 gtgacagcgggacttcatta 5692758 5692740 NA NA NA 10.1007/s00122-008-0746-y 18379755 1 SolTub_3.0 t4113.M020293.1 t4113 Sut2-8 1 Others t4113.G002 SolTub_3.0 5 atgcattcggttctcattgtc 5693022 5693042 ccaaagcagcaatttgagtt 5693713 5693694 NA NA NA 10.1007/s00122-008-0746-y 18379755 1 SolTub_3.0 t4113.M020294.1 t4113 Sut2-9 1 Others t4113.G002 SolTub_3.0 5 cttggcattcctcttgctg 5693728 5693746 atggaagccagttgatttga 5694392 5694373 NA NA NA 10.1007/s00122-008-0746-y 18379755 1 SolTub_3.0 t4113.M020295.1 t4113 Sut2-11 1 Others t4113.G002 SolTub_3.0 5 agcgtggtttctatcagtgc 5693632 5693651 cttcagtaacatgaactacatgtgta 5694457 5694432 NA NA NA 10.1007/s00122-008-0746-y 18379755 1 SolTub_3.0 t4113.M020298.1 t4113 Sps-3 1 Others t4113.G002 SolTub_3.0 7 agcatttggtgaatgtcgtc 3894135 3894154 gttgccttggtttgcagcta 3895797 3895778 NA NA NA 10.1007/s00122-008-0746-y 18379755 1 SolTub_3.0 t4113.M020300.1 t4113 Sps-15 1 Others t4113.G002 SolTub_3.0 7 ggtcactcacttggtagaga 3892863 3892882 tctttgcagcaagacggtag 3894453 3894434 NA NA NA 10.1007/s00122-008-0746-y 18379755 1 SolTub_3.0 t4113.M020301.1 t4113 Sus3-1 1 Others t4113.G002 SolTub_3.0 7 gcaaagtaaatcttatacatgtgacc 40643437 40643462 catgacaaggaaagcatgacccc 40644639 40644617 NA NA NA 10.1007/s00122-008-0746-y 18379755 1 SolTub_3.0 t4113.M020302.1 t4113 Pha2-3 1 Others t4113.G002 SolTub_3.0 7 gctgagaccatccgtagagc 10837208 10837227 aggatggcaatgatcaaaac 10838047 10838028 NA NA NA 10.1007/s00122-008-0746-y 18379755 1 SolTub_3.0 t4113.M020303.1 t4113 AGPsb-1 1 Others t4113.G002 SolTub_3.0 7 gattctacacgtgctgtatccag 51451621 51451643 ggcagagttgaattgtgtga 51452919 51452900 NA NA NA 10.1007/s00122-008-0746-y 18379755 1 SolTub_3.0 t4113.M020304.1 t4113 AGPsb-2 1 Others t4113.G002 SolTub_3.0 7 tcctgtaagcaactgcttgaac 51452853 51452874 tcatgagaccaaatgcagtg 51453523 51453504 NA NA NA 10.1007/s00122-008-0746-y 18379755 1 SolTub_3.0 t4113.M020305.1 t4113 AGPsb-6 1 Others t4113.G002 SolTub_3.0 7 gcaacttcacttgggatgag 51453847 51453866 caagcatttttgatggtggt 51454540 51454521 NA NA NA 10.1007/s00122-008-0746-y 18379755 1 SolTub_3.0 t4113.M020306.1 t4113 AGPsb-15 1 Others t4113.G002 SolTub_3.0 7 gtcacagatagtgtcattggtga 51454549 51454571 tgcatgatctgagtccaacc 51456468 51456449 NA NA NA 10.1007/s00122-008-0746-y 18379755 1 SolTub_3.0 t4113.M020309.1 t4113 StpH-13 1 Others t4113.G002 SolTub_3.0 00 agcatccatgtagctcggaaa 18201513 18201533 gtatctgtggcagagatgctt 18202801 18202781 NA NA NA 10.1007/s00122-008-0746-y 18379755 1 SolTub_3.0 t4113.M020311.1 t4113 Rca-3 1 Others t4113.G002 SolTub_3.0 10 cccttgagaagctccttgag 50948060 50948077 ttcccttaacagtggaacacaa 50948500 50948479 NA NA NA 10.1007/s00122-008-0746-y 18379755 1 SolTub_3.0 t4113.M020312.1 t4113 pCD141-3 1 Others t4113.G002 SolTub_3.0 10 acaagtttggataaggcagag 55855935 55855955 tagagtctcaattgtgattctctcc 55856592 55856568 NA NA NA 10.1007/s00122-008-0746-y 18379755 1 SolTub_3.0 t4113.M020314.1 t4113 Dbe-5 1 Others t4113.G002 SolTub_3.0 11 gtgaccctactgtgtctcatgaa 3946378 3946400 tttggaactccccagagaac 3949016 3948997 NA NA NA 10.1007/s00122-008-0746-y 18379755 1 SolTub_3.0 t4113.M020315.1 t4113 Dbe-8 1 Others t4113.G002 SolTub_3.0 11 ttgctggtgtcgaagatgag 3948394 3948413 tcctcagaatctggtggaaa 3948839 3948820 NA NA NA 10.1007/s00122-008-0746-y 18379755 1 SolTub_3.0 t4113.M020316.1 t4113 Ppa1-2 1 Others t4113.G002 SolTub_3.0 12 agagcagcaagggataaacc 53433775 53433794 tgatcgcatcctatactcttcag 53434752 53434730 NA NA NA 10.1007/s00122-008-0746-y 18379755 1 SolTub_3.0 t4113.M020317.1 t4113 Sus4-2 1 Others t4113.G002 SolTub_3.0 12 ctcatggatattttgcccaag 3088708 3088728 tttccgtttcggagtacgag 3089923 3089906 NA NA NA 10.1007/s00122-008-0746-y 18379755 1 SolTub_3.0 t4113.M020319.1 t4113 CP132 1 Others t4113.G002 SolTub_3.0 1 gagttagccttgcagtgtc 82979984 82980002 cttctgacttcatcaggatc 82980295 82980276 NA NA NA 10.1007/s00122-007-0546-9 17468842 1 SolTub_3.0 t4113.M020320.1 t4113 GP205 1 Others t4113.G002 SolTub_3.0 2 gcttcaatgatctgtttaaatattcc 5509648 5509673 gtatatgaaaactgcctaagctag 5509978 5509955 NA NA MseI 10.1007/s00122-007-0546-9 17468842 1 SolTub_3.0 t4113.M020322.1 t4113 GP26 1 Others t4113.G002 SolTub_3.0 2 gtcaagccttgcagctgtg 32695139 32695157 acaagactagaccgaatgcg 32695884 32695865 NA NA MseI 10.1007/s00122-007-0546-9 17468842 1 SolTub_3.0 t4113.M020323.1 t4113 GP321 1 Others t4113.G002 SolTub_3.0 2 gcacaaaacaaaccaacgcaa 29487705 29487725 tcaccttgttatctcctatgc 29488546 29488526 NA NA MseI 10.1007/s00122-007-0546-9 17468842 1 SolTub_3.0 t4113.M020324.1 t4113 GP86 1 Others t4113.G002 SolTub_3.0 2 tgctgctgctgatactcag 27982776 27982794 gatatcagtgatgcctcatc 27983678 27983659 NA NA MseI 10.1007/s00122-007-0546-9 17468842 1 SolTub_3.0 t4113.M020329.1 t4113 Ci7 1 Others t4113.G002 SolTub_3.0 4 gcttgttctgttcgtactg 71449746 71449764 taccctaccaataccgac 71450742 71450725 NA NA MseI 10.1007/s00122-007-0546-9 17468842 1 SolTub_3.0 t4113.M020332.1 t4113 CP18 1 Others t4113.G002 SolTub_3.0 6 gcaatggctcaaacaatgttg 43260273 43260293 accaatcatagcaacacggc 43260768 43260749 NA NA MseI 10.1007/s00122-007-0546-9 17468842 1 SolTub_3.0 t4113.M020335.1 t4113 BA9i23 t7 1 Others t4113.G002 SolTub_3.0 7 tcaagagtatgggtatagtatttg 10948278 10948301 gagaacgtcctgctttgccaac 10948595 10948574 NA NA MseI 10.1007/s00122-007-0546-9 17468842 1 SolTub_3.0 t4113.M020336.1 t4113 CP52 1 Others t4113.G002 SolTub_3.0 7 cgagaggcagatgttgatg 295795 295813 tctaaaggtgtcaaaggtgc 296075 296056 NA NA MseI 10.1007/s00122-007-0546-9 17468842 1 SolTub_3.0 t4113.M020337.1 t4113 GP94 1 Others t4113.G002 SolTub_3.0 9 atgtatcacaatcacattcttgctc 53400186 53400210 tgtaaaaccaacaagtagtgttgc 53400505 53400482 NA NA NA 10.1007/s00122-007-0546-9 17468842 1 SolTub_3.0 t4113.M020339.1 t4113 GP267 1 Others t4113.G002 SolTub_3.0 9 ccaccaagacaagcctag 9726755 9726772 cagttgtgaataggatgc 9727252 9727235 NA NA DpnII 10.1007/s00122-007-0546-9 17468842 1 SolTub_3.0 t4113.M020340.1 t4113 CP44 1 Others t4113.G002 SolTub_3.0 9 attaccagatgcagagatgctca 1811350 1811372 ggtgggacctgagaagacaagc 1811689 1811668 NA NA MseI 10.1007/s00122-007-0546-9 17468842 1 SolTub_3.0 t4113.M020341.1 t4113 GP173b 1 Others t4113.G002 SolTub_3.0 8 agttggtattgctcctcttg 53555797 53555816 tggaagaacatgagcatcag 53557231 53557212 NA NA MseI 10.1007/s00122-007-0546-9 17468842 1 SolTub_3.0 t4113.M020342.1 t4113 BA113a17 t3 1 Others t4113.G002 SolTub_3.0 10 ctttcactgctcaatgatttgcag 58749391 58749414 tgcaatgagtatttgtctttgcaga 58749632 58749608 NA NA MseI 10.1007/s00122-007-0546-9 17468842 1 SolTub_3.0 t4113.M020344.1 t4113 BA66k2 t3 1 Others t4113.G002 SolTub_3.0 10 cttcattcatactatatgttcaatgg 58965327 58965352 ttcaatccgagctcttggaattg 58965595 58965573 NA NA NA 10.1007/s00122-007-0546-9 17468842 1 SolTub_3.0 t4113.M020345.1 t4113 CP72 1 Others t4113.G002 SolTub_3.0 10 caagaaacctcaaatgatcaag 59124971 59124992 tcatcagtaaagatttggaacc 59125389 59125368 NA NA AluI 10.1007/s00122-007-0546-9 17468842 1 SolTub_3.0 t4113.M020346.1 t4113 GP287 1 Others t4113.G002 SolTub_3.0 10 tcattcccaagacactcatgc 54949150 54949170 actcaaccaccagctcaagac 54949699 54949679 NA NA MseI 10.1007/s00122-007-0546-9 17468842 1 SolTub_3.0 t4113.M020347.1 t4113 TPT 1 Others t4113.G002 SolTub_3.0 10 ccttctctctcactgccaatg 4569063 4569083 ctcaccaagcaatataccacc 4570228 4570208 NA NA MseI 10.1007/s00122-007-0546-9 17468842 1 SolTub_3.0 t4113.M020348.1 t4113 BA228d23 t3 1 Others t4113.G002 SolTub_3.0 11 aaaagcttttaatatttgggccgc 44304498 44304521 gtgatctggaatctttgacatctg 44304816 44304793 NA NA HinfI 10.1007/s00122-007-0546-9 17468842 1 SolTub_3.0 t4113.M020351.1 t4113 GP229 1 Others t4113.G002 SolTub_3.0 12 attatcttcacagcagtagag 60392439 60392459 agtcttggcatcaaatatttg 60393140 60393120 NA NA MseI 10.1007/s00122-007-0546-9 17468842 1 SolTub_3.0 t4113.M020352.1 t4113 S1d11 1 Others t4113.G002 SolTub_3.0 00 gttgtaatttcttcagcaaaattagc 36280885 36280910 ttcacgaatcggactaaaagattg 36281103 36281080 NA NA MseI 10.1007/s00122-007-0546-9 17468842 1 SolTub_3.0 t4113.M020353.1 t4113 P1g7 1 Others t4113.G002 SolTub_3.0 3 ggtgcgttaggtggtgatg 43945172 43945190 agtctccaacaacatcgtcc 43945441 43945422 NA NA NA 10.1007/s00122-007-0546-9 17468842 1 SolTub_3.0 t4113.M020401.1 t4113 CP108 1 Others t4113.G002 SolTub_3.0 1 tttagctgcatacaagatgc 20549848 20549867 cccaaggcctaggccc 20550277 20550262 NA NA NA ttt agc tgc ata caa gat gc ccc aag gcc tag gcc c 10.1094/MPMI.2004.17.10.1126 15497405 1 SolTub_3.0 t4113.M020402.1 t4113 BA121o1t7 1 Others t4113.G002 SolTub_3.0 5 ggatttggagcaccgggttgt 5301029 5301049 cataaagtcttgcagagttctcaa 5302190 5302167 NA NA NA cat aaa gtc ttg cag agt tct caa gga ttt gga gca ccg ggt tgt 10.1094/MPMI.2004.17.10.1126 15497405 1 SolTub_3.0 t4113.M020403.1 t4113 BA1m23t3 1 Others t4113.G002 SolTub_3.0 4 accctcctatttagtattgttcag 7776144 7776167 ggaaaagatatatagtggggtaca 7776455 7776432 NA NA NA acc ctc cta ttt agt att gtt cag gga aaa gat ata tag tgg ggt aca 10.1094/MPMI.2004.17.10.1126 15497405 1 SolTub_3.0 t4113.M020406.1 t4113 RC5t7 1 Others t4113.G002 SolTub_3.0 8 cacacctggtaaggatttacatca 54335994 54336017 agaccaatgatggagatgtatacg 54336658 54336635 NA NA NA aga cca atg atg gag atg tat acg cac acc tgg taa gga ttt aca tca 10.1094/MPMI.2004.17.10.1126 15497405 1 SolTub_3.0 t4113.M020407.1 t4113 RC1t3 1 Others t4113.G002 SolTub_3.0 8 cctttcgacttacatgaccattacg 54336286 54336310 gcttcaccatgaaacgggtctacat 54337135 54337111 NA NA NA gct tca cca tga aac ggg tct aca t cct ttc gac tta cat gac cat tac g 10.1094/MPMI.2004.17.10.1126 15497405 1 SolTub_3.0 t4113.M020408.1 t4113 573 1 Others t4113.G002 SolTub_3.0 8 tgaatcctgagcaagcaagttcag 54303139 54303162 cacagcttgatattgtggttctgca 54303617 54303593 NA NA NA cac agc ttg ata ttg tgg ttc tgc a tga atc ctg agc aag caa gtt cag 10.1094/MPMI.2004.17.10.1126 15497405 1 SolTub_3.0 t4113.M020409.1 t4113 57t3 1 Others t4113.G002 SolTub_3.0 8 gaagaggagaaccttggtggatgg 54303270 54303293 caatccgttggagtttagacgatc 54304046 54304023 NA NA AluI caa tcc gtt gga gtt tag acg atc gaa gag gag aac ctt ggt gga tgg 10.1094/MPMI.2004.17.10.1126 15497405 1 SolTub_3.0 t4113.M020410.1 t4113 BA228d23t3 1 Others t4113.G002 SolTub_3.0 11 ctcttctcggaatgatttacaag 44304655 44304677 tcgtaggtaaattttcaaggtcc 44304787 44304765 NA NA NA tcg tag gta aat ttt caa ggt cc ctc ttc tcg gaa tga ttt aca ag 10.1094/MPMI.2004.17.10.1126 15497405 1 SolTub_3.0 t4113.M020413.1 t4113 E22 1 Others t4113.G002 SolTub_3.0 12 gatggtagtggccgaggcaaatg 54234498 54234520 tccagcaggacatgtaaacaaact 54234920 54234897 NA NA NA gat ggt agt ggc cga ggc aaa tg tcc agc agg aca tgt aaa caa act 10.1094/MPMI.2004.17.10.1126 15497405 1 SolTub_3.0 t4113.M020414.1 t4113 319 1 Others t4113.G002 SolTub_3.0 12 ggacacgaacctacaattgcagatg 54233942 54233966 ggtaatgtcaaaagtggcagcatgagt 54234359 54234333 NA NA NA gga cac gaa cct aca att gca gat g ggt aat gtc aaa agt ggc agc atg agt 10.1094/MPMI.2004.17.10.1126 15497405 1 SolTub_3.0 t4113.M020428.1 t4113 DMC42144a 1 Others t4113.G002 SolTub_3.0 9 ACACCGCCGAGAAAGTCCAGCA 59477919 59477940 ATTTGATCTAGAACGTGCCCTGAGC 59478609 59478585 NA NA NA 10.1007/s00122-012-1791-0 22274766 1 SolTub_3.0 t4113.M020429.1 t4113 DMC42152b 1 Others t4113.G002 SolTub_3.0 9 AGCACCCTCCAAGCTCACGAAAGTT 59496919 59496943 CCGGCCCCTTAACTTGGCCCA 59497441 59497421 NA NA NA 10.1007/s00122-012-1791-0 22274766 1 SolTub_3.0 t4113.M020431.1 t4113 STMCL13 1 Others t4113.G002 SolTub_3.0 12 ATTACGCAACCGATCCAGTC 57510891 57510910 CGGCATCTCAATCTCAGTCA 57511031 57511012 NA NA NA 10.1007/s00122-012-1791-0 22274766 1 SolTub_3.0 t4113.M020432.1 t4113 STMGX55 1 Others t4113.G002 SolTub_3.0 4 AAATGCACCAACTTGAAGTGC 2768461 2768481 CCAAATTTGTTGATTTGGGG 2768747 2768729 NA NA NA 10.1007/s00122-012-1791-0 22274766 1 SolTub_3.0 t4113.M020447.1 t4113 p3f8 1 Others t4113.G002 SolTub_3.0 5 GCTGTGAGGGCCTTGAGG 5038480 5038497 CGACTCAGCTGAGCCCTG 5038739 5038722 NA + [AM (diploid clone 3778-16)] NA 10.1007/s00122-009-1026-1 19363662 1 SolTub_3.0 t4113.P0000009 t4113 At3g24160f2_F-At3g24160f2_R 1 Others t4113.G001 DM_v4.03 NA AGAGCAATATGGAGCAGAAGGTGTTG 0 0 TCGAATAATGGCTCAGCTACTGAAGG 0 0 NA NA 0 0 NA NA 10.1093/jxb/ery021 29385612 1 DM_v4.03 t4113.P0000010 t4113 Rpi_svnt1_367_F-Rpi_svnt1_367_R 1 Others t4113.G001 DM_v4.03 NA ATCTATCCACAGCACGTGTTG 0 0 ACATCACCTGCCAGTTGTTG 0 0 NA NA 0 0 NA NA 10.1093/jxb/ery021 29385612 1 DM_v4.03 t4113.P0000011 t4113 DMC42152bf_F-DMC42152bf_R 1 Others t4113.G001 DM_v4.03 ST4.03ch09 AGCACCCTCCAAGCTCACGAAAGTT 59496919 59496943 CCGGCCCCTTAACTTGGCCCA 59497441 59497421 NA NA 0 0 NA NA 10.1093/jxb/ery021 29385612 1 DM_v4.03 t4113.P0000012 t4113 DMC42144af_F-DMC42144af_R 1 Others t4113.G001 DM_v4.03 ST4.03ch09 ACACCGCCGAGAAAGTCCAGCA 59477919 59477940 ATTTGATCTAGAACGTGCCCTGAGC 59478609 59478585 NA NA 0 0 NA NA 10.1093/jxb/ery021 29385612 1 DM_v4.03 t4113.P0000013 t4113 DMG400031529_Fy-DMG400031529_R 1 Others t4113.G001 DM_v4.03 ST4.03ch09 ATAAACAATCTATTTGTCACCCCTAC 60152789 60152814 CCTCCATACCAACCACCTCTA 60153421 60153401 NA NA 0 0 NA NA 10.1093/jxb/ery021 29385612 1 DM_v4.03 t4113.P0000014 t4113 STM09g029480_F-STM09g029480_R 1 Others t4113.G001 DM_v4.03 ST4.03ch09 AACACCCTTCTGTTGGTTGC 59858892 59858911 CGCCATTCTTCCAAACATCT 59859041 59859022 NA NA 0 0 NA NA 10.1093/jxb/ery021 29385612 1 DM_v4.03 t4113.P0000015 t4113 STMput157a37146_F-STMput157a37146_R 1 Others t4113.G001 DM_v4.03 ST4.03ch09 GTGTTGGTGGCGGATACC 60194276 60194293 CCACGGTTGCCTGAGTATTT 60194405 60194386 NA NA 0 0 NA NA Blast_hit_num.:3 10.1093/jxb/ery021 29385612 1 DM_v4.03 t4113.P0000016 t4113 R8-UTR_F-R8-UTR_R 1 Others t4113.G001 DM_v4.03 NA AAAACTTTCACGCACCCATAGGA 0 0 AACAAGAGATGAATTAAGTCGGTAGC 0 0 NA NA 0 0 NA NA 10.1093/jxb/ery021 29385612 1 DM_v4.03 t4113.P0000017 t4113 pB7-R8_F-pB7-R8_R 1 Others t4113.G001 DM_v4.03 NA TCGGCATGGACGAGCTGTACAAGATGAATGAAAATGAAATTGAGGAA 0 0 GGGATATCACCACTTTGTACATCAATCTCTTCGACTTCTTCTTACG 0 0 NA NA 0 0 NA NA 10.1093/jxb/ery021 29385612 1 DM_v4.03 t4113.P0000018 t4113 attB1-Avr8_F-attB1-Avr8_R 1 Others t4113.G001 DM_v4.03 NA AAAAAGCAGGCTTCACCATGACACCAGCACCGCCACAAGTAT 0 0 AGAAAGCTGGGTCTTACGATGTTTTCGCTTCTTTAA 0 0 NA NA 0 0 NA NA 10.1093/jxb/ery021 29385612 1 DM_v4.03 t4113.P0000019 t4113 attB1-attB2 1 Others t4113.G001 DM_v4.03 NA GGGGACAAGT TTGTACAAAAAAGCAGGCT 0 0 GGGGACCACTTTGTACAAGAA AGCTGGGT 0 0 NA NA 0 0 NA NA 10.1093/jxb/ery021 29385612 1 DM_v4.03 t4113.P0000020 t4113 sjj6F-sjj6R 1 Others t4113.G001 DM_v4.03 ST4.03ch09 TTTTCACCACACCAACTTCTG 59118823 59118843 GCTTCAATCTTATTTCTACCA 59119851 59119831 NA NA 0 0 NA NA 10.1093/jxb/ery021 29385612 1 DM_v4.03 t4113.P0000021 t4113 vnt32F-vnt32R 1 Others t4113.G001 DM_v4.03 ST4.03ch09 CACATGCTGTGGATGAGATAC 59573488 59573508 ATAAGAACTGCCTTTCGACTT 59574640 59574620 NA NA 0 0 NA NA 10.1093/jxb/ery021 29385612 1 DM_v4.03 t4113.P0000022 t4113 sjj100F-sjj100R 1 Others t4113.G001 DM_v4.03 ST4.03ch09 TCTCCCTCATTGCTATTTTG 60308819 60308838 TGTTGTTCTCGTTGTTGGTC 60309710 60309691 NA NA 0 0 NA NA 10.1093/jxb/ery021 29385612 1 DM_v4.03 t4113.P0000023 t4113 sjj131F-sjj131R 1 Others t4113.G001 DM_v4.03 ST4.03ch09 GGGTTTTTGGTAAGTGTGTG 60496254 60496273 CTCGACTGCTGTTATTGGAT 60497169 60497150 NA NA 0 0 NA NA 10.1093/jxb/ery021 29385612 1 DM_v4.03 t4113.P0000024 t4113 3233-1F-3233-1R 1 Others t4113.G001 DM_v4.03 ST4.03ch09 GAGCGATAGAGCCCTTCCACAC 60652736 60652757 AGGAGATCCCCCTTAGCTTTGC 60653950 60653929 NA NA 0 0 NA NA 10.1093/jxb/ery021 29385612 1 DM_v4.03 t4113.P0000025 t4113 jr38F-jr38R 1 Others t4113.G001 DM_v4.03 ST4.03ch09 AATCCAGAAAGCTCCATCCAC 60677216 60677236 CTTTTGCCTGATTCCAGAGAC 60678275 60678255 NA NA 0 0 NA NA 10.1093/jxb/ery021 29385612 1 DM_v4.03 t4113.P0000026 t4113 5455-1F-5455-1R 1 Others t4113.G001 DM_v4.03 ST4.03ch09 ATTGTTCCTTCGCTTTGCTTG 60829857 60829877 ACCACTCTTCTAAACGTGGGT 60830729 60830709 NA NA 0 0 NA NA 10.1093/jxb/ery021 29385612 1 DM_v4.03 t4113.P0000027 t4113 jr69F-jr69R 1 Others t4113.G001 DM_v4.03 ST4.03ch09 GTGCGAAGAATATAGTCTGGC 60904433 60904453 TCAGCAAAGCTAAGTGGGATC 60905752 60905732 NA NA 0 0 NA NA 10.1093/jxb/ery021 29385612 1 DM_v4.03 t4113.P0000028 t4113 jr78-2F-jr78-2R 1 Others t4113.G001 DM_v4.03 ST4.03ch09 CGGGAGGAACGAAGGAACTAG 60957004 60957024 AAACACGGGACTTTGGACGAG 60958149 60958129 NA NA 0 0 NA NA 10.1093/jxb/ery021 29385612 1 DM_v4.03 t4113.P0000029 t4113 8384-1F-8384-1R 1 Others t4113.G001 DM_v4.03 ST4.03ch09 ATAGGAGGTTGAGCAACGTGAA 61040518 61040539 GGCTGTAGGTGAGAGAGGGTAT 61041977 61041956 NA NA 0 0 NA NA 10.1093/jxb/ery021 29385612 1 DM_v4.03 t4113.P0000030 t4113 8586-1F-8586-1R 1 Others t4113.G001 DM_v4.03 ST4.03ch09 AGTTTACCCATTTCCCATTCC 61050190 61050210 CCCCGGTTGTAGTTTATGTTC 61051170 61051150 NA NA 0 0 NA NA 10.1093/jxb/ery021 29385612 1 DM_v4.03 t4113.P0000031 t4113 sjj236F-sjj236R 1 Others t4113.G001 DM_v4.03 ST4.03ch09 ACAGAAGCCACAACACAAA 61240869 61240887 AGCCAAAGCAAGTTCAAAT 61241399 61241381 NA NA 0 0 NA NA 10.1093/jxb/ery021 29385612 1 DM_v4.03 t4113.P0000032 t4113 sjj214F-sjj214R 1 Others t4113.G001 DM_v4.03 ST4.03ch09 AGAGCGGAGGAGAGTTTT 61400965 61400982 GGGTTTGCCATTGTTTAG 61401870 61401853 NA NA 0 0 NA NA 10.1093/jxb/ery021 29385612 1 DM_v4.03 t4113.P000009.1 t4113 DMC42152bf_F-DMC42152bf_R 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch09 AGCACCCTCCAAGCTCACGAAAGTT 59496919 59496943 CCGGCCCCTTAACTTGGCCCA 59497441 59497421 10.1093/jxb/ery021 29385612 1 DM_v4.03 t4113.P000010.1 t4113 DMC42144af_F-DMC42144af_R 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch09 ACACCGCCGAGAAAGTCCAGCA 59477919 59477940 ATTTGATCTAGAACGTGCCCTGAGC 59478609 59478585 10.1093/jxb/ery021 29385612 1 DM_v4.03 t4113.P000011.1 t4113 DMG400031529_Fy-DMG400031529_R 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch09 ATAAACAATCTATTTGTCACCCCTAC 60152789 60152814 CCTCCATACCAACCACCTCTA 60153421 60153401 10.1093/jxb/ery021 29385612 1 DM_v4.03 t4113.P000012.1 t4113 STM09g029480_F-STM09g029480_R 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch09 AACACCCTTCTGTTGGTTGC 59858892 59858911 CGCCATTCTTCCAAACATCT 59859041 59859022 10.1093/jxb/ery021 29385612 1 DM_v4.03 t4113.P000013.1 t4113 STMput157a37146_F-STMput157a37146_R 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch09 GTGTTGGTGGCGGATACC 60194276 60194293 CCACGGTTGCCTGAGTATTT 60194405 60194386 Blast_hit_num.:3 10.1093/jxb/ery021 29385612 1 DM_v4.03 t4113.P000014.1 t4113 sjj6F-sjj6R 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch09 TTTTCACCACACCAACTTCTG 59118823 59118843 GCTTCAATCTTATTTCTACCA 59119851 59119831 10.1093/jxb/ery021 29385612 1 DM_v4.03 t4113.P000015.1 t4113 vnt32F-vnt32R 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch09 CACATGCTGTGGATGAGATAC 59573488 59573508 ATAAGAACTGCCTTTCGACTT 59574640 59574620 10.1093/jxb/ery021 29385612 1 DM_v4.03 t4113.P000016.1 t4113 sjj100F-sjj100R 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch09 TCTCCCTCATTGCTATTTTG 60308819 60308838 TGTTGTTCTCGTTGTTGGTC 60309710 60309691 10.1093/jxb/ery021 29385612 1 DM_v4.03 t4113.P000017.1 t4113 sjj131F-sjj131R 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch09 GGGTTTTTGGTAAGTGTGTG 60496254 60496273 CTCGACTGCTGTTATTGGAT 60497169 60497150 10.1093/jxb/ery021 29385612 1 DM_v4.03 t4113.P0000178 t4113 MF18 1 Others t4113.G001 DM_v4.03 ST4.03ch01 TTGTCTAACTGAAGTACCAAAG 559419 559440 TGTGGTAGCGATTCTCAAAGG 560094 560074 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000179 t4113 MF19 1 Others t4113.G001 DM_v4.03 ST4.03ch01 GCTACTGGATTGGGATGATC 1651576 1651595 TAGTTCATTGTCATTGCAAACC 1651929 1651908 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000018.1 t4113 3233-1F-3233-1R 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch09 GAGCGATAGAGCCCTTCCACAC 60652736 60652757 AGGAGATCCCCCTTAGCTTTGC 60653950 60653929 10.1093/jxb/ery021 29385612 1 DM_v4.03 t4113.P0000180 t4113 MF20 1 Others t4113.G001 DM_v4.03 NA TAGCTTAATCACCTGAAATTATTA 0 0 CAGGTTCAACACAACTTCAATT 0 0 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000181 t4113 MF22 1 Others t4113.G001 DM_v4.03 ST4.03ch01 GTCCTCAGCTTATAAATTCAAC 58072131 58072152 CGACATCTTAATCATATAGATTC 58072704 58072682 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000182 t4113 TM23 1 Others t4113.G001 DM_v4.03 ST4.03ch01 TCAAGGTCAGAGAACAGATTGC 60730450 60730471 TTACTGGTTGGCTTCTTCCATT 60730851 60730830 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000183 t4113 TM24 1 Others t4113.G001 DM_v4.03 ST4.03ch01 TACTAACCAATTTTACTACATGAT 60731446 60731469 CATTGTTTGTTATTCTTGATCT 60732139 60732120 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000184 t4113 TM10 1 Others t4113.G001 DM_v4.03 ST4.03ch01 TGTAAACTTTCAAGAATAGACAG 73019320 73019342 GTACTTTTTGGGGATATCAAGA 73019805 73019784 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000185 t4113 MF21 1 Others t4113.G001 DM_v4.03 ST4.03ch01 TCCACCCTGAACCAACGCA 3698408 3698426 GTACAACTTATTATTATCCACAG 3698915 3698893 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000186 t4113 TM11 1 Others t4113.G001 DM_v4.03 ST4.03ch02 CACTCAAAGAATAAGCTGAATT 33876714 33876735 CGGATTCTTCCGTCTCCG 33877628 33877611 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000187 t4113 TM43 1 Others t4113.G001 DM_v4.03 ST4.03ch03 ATCAGGAAAGGCAGCAACAG 207366 207385 CGATAACTTCGCTTTCAAGTC 207665 207645 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000188 t4113 MF1 1 Others t4113.G001 DM_v4.03 ST4.03ch03 AAGAGCACAAGGCCAGGCAT 254350 254369 TATTGCTAGTATCACGAGAATA 254840 254819 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000189 t4113 TM13 1 Others t4113.G001 DM_v4.03 ST4.03ch03 CCACATTACAATAATCTTGTACTG 746294 746317 CATGGCTGCTTCATCCATGGC 747240 747220 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000019.1 t4113 jr38F-jr38R 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch09 AATCCAGAAAGCTCCATCCAC 60677216 60677236 CTTTTGCCTGATTCCAGAGAC 60678275 60678255 10.1093/jxb/ery021 29385612 1 DM_v4.03 t4113.P0000190 t4113 MF2 1 Others t4113.G001 DM_v4.03 ST4.03ch03 CGTCAACTTTTCAAAGATCATC 1976908 1976929 CCCTTTACTTTCCTAATCGACT 1977292 1977271 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000191 t4113 MF3 1 Others t4113.G001 DM_v4.03 ST4.03ch03 AAGTACCAAGTTGGACTCATG 2574164 2574184 AGTTACTGATGATAATAGCTTG 2574513 2574492 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000192 t4113 MF6 1 Others t4113.G001 DM_v4.03 ST4.03ch03 AGGGTTTCACAAAGAGGGATT 44507396 44507416 GAATCAGAAGATTTTATAGATAAC 44507800 44507777 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000193 t4113 MF4 1 Others t4113.G001 DM_v4.03 ST4.03ch03 TGCGTGTGATCTCTTCTATCT 44501309 44501329 TCAAAGTTGTGTTTCCATTATCT 44501775 44501753 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000194 t4113 MF5 1 Others t4113.G001 DM_v4.03 ST4.03ch03 CAAGTACGTAGTAGCTTACAT 45734082 45734102 TCAGTACATACAGGGACAGA 45734401 45734382 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000195 t4113 TM12 1 Others t4113.G001 DM_v4.03 ST4.03ch03 GCTAATTTCATTTCTCCTTGCA 49838710 49838731 CTCAAGGATACATTAAGGTAGC 49840059 49840038 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000196 t4113 TM12b 1 Others t4113.G001 DM_v4.03 ST4.03ch03 GCTAATTTCATTTCTCCTTGC 49838710 49838730 CTCAAGGATACATTAAGGTAG 49840059 49840039 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000197 t4113 TM12c 1 Others t4113.G001 DM_v4.03 ST4.03ch03 CAGAGGTTGGCCAGTGATTT 49839498 49839517 CTCAAGGATACATTAAGGTAG 49840059 49840039 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000198 t4113 TM14 1 Others t4113.G001 DM_v4.03 ST4.03ch03 AGCACTATAAGCTCAAATTAAAT 34073899 34073921 AGCTCTGTAAGTCAACTTCTAC 34074546 34074525 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000199 t4113 TM15 1 Others t4113.G001 DM_v4.03 ST4.03ch03 AGTCATGCAGCGCAACCTTT 61796957 61796976 ATTTTTCCACAACTCTCCTTTA 61797544 61797523 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000020.1 t4113 5455-1F-5455-1R 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch09 ATTGTTCCTTCGCTTTGCTTG 60829857 60829877 ACCACTCTTCTAAACGTGGGT 60830729 60830709 10.1093/jxb/ery021 29385612 1 DM_v4.03 t4113.P0000200 t4113 TM20 1 Others t4113.G001 DM_v4.03 ST4.03ch04 CCATTGTCGACACAGACATCTT 2625525 2625546 AACACACCGGGATCTGTATGT 2626378 2626358 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000201 t4113 TM40 1 Others t4113.G001 DM_v4.03 ST4.03ch04 TACAATAATAAACATCCATATGG 9190201 9190223 AATAGACCACTATAATGGTGC 9191229 9191209 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000202 t4113 TM16 1 Others t4113.G001 DM_v4.03 ST4.03ch04 GTGTACTTGATGGACAATGGTAA 63549554 63549576 CCAATGAAGGCAATTGCTAAG 63550477 63550458 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000203 t4113 TM35 1 Others t4113.G001 DM_v4.03 ST4.03ch05 GATCGTAATGCTAAAATTTGAGT 5067838 5067860 GCTTATCGTCTTCACTACCAA 5068521 5068501 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000204 t4113 TM33 1 Others t4113.G001 DM_v4.03 ST4.03ch05 TGATGTTTCTTCCCTTGAAACT 47848170 47848191 CTTGGATTTGGACATGGACAT 47849113 47849093 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000205 t4113 TM34 1 Others t4113.G001 DM_v4.03 ST4.03ch05 ATTGCAATAATATGTTTGTAACATT 50876144 50876168 ACACAAATGACTGATATGGAATT 50876521 50876499 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000206 t4113 MF8 1 Others t4113.G001 DM_v4.03 ST4.03ch05 AAGGCAAATAATTGAAGTAGGT 1981114 1981135 CTCAAAGAAGCCATGTCCATT 1981669 1981649 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000207 t4113 MF9 1 Others t4113.G001 DM_v4.03 ST4.03ch05 GACATGATTTAGTGATGTATAG 2046112 2046133 GAGTTGAAACATCCAAAGTGC 2046497 2046477 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000208 t4113 MF7 1 Others t4113.G001 DM_v4.03 ST4.03ch05 AAGAAATGCACAGATACTGAAG 2134589 2134610 CTTGCTTACCCCTATGTTCC 2135305 2135286 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000209 t4113 MF12 1 Others t4113.G001 DM_v4.03 ST4.03ch06 CAGAGACAATTTCAAACAAGTG 49101573 49101594 GTACTTCGTTGCTCAATTTAAT 49102152 49102131 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000021.1 t4113 jr69F-jr69R 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch09 GTGCGAAGAATATAGTCTGGC 60904433 60904453 TCAGCAAAGCTAAGTGGGATC 60905752 60905732 10.1093/jxb/ery021 29385612 1 DM_v4.03 t4113.P0000210 t4113 TM41 1 Others t4113.G001 DM_v4.03 ST4.03ch06 CTAGAATTGTCATTTCTCTACC 50409859 50409880 CTTGTTTATTGGTAAAGTGTGC 50410345 50410324 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000211 t4113 TM17 1 Others t4113.G001 DM_v4.03 ST4.03ch06 ACTGTAACGACGCAAGCCT 51580964 51580982 TTCCTGTCACATTGTGTTGCA 51581841 51581821 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000212 t4113 TM19 1 Others t4113.G001 DM_v4.03 NA GATCCATCCAATTAATACAATGG 0 0 TTATGTTATCCATAAGATGCATG 0 0 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000213 t4113 MF11 1 Others t4113.G001 DM_v4.03 ST4.03ch06 CCACTATTTTAAGTGCTATCAAG 54346464 54346486 CCCATAACTAACTTCTGGAAAA 54347092 54347071 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000214 t4113 TM18 1 Others t4113.G001 DM_v4.03 ST4.03ch06 CAGATAGATCAGCACCAGTTA 56859698 56859718 GATTCTCAGCTTCTGCTTCTG 56860110 56860090 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000215 t4113 MF10 1 Others t4113.G001 DM_v4.03 ST4.03ch06 CACTGTAATAATGGCTTTATTCT 50574351 50574373 AAGAAGGTCAAGACTTTCATC 50575325 50575305 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000216 t4113 TM21 1 Others t4113.G001 DM_v4.03 ST4.03ch07 TATTATTAAAGGAATTCCAAGATC 48948583 48948605 AGGTCCCTCCAGTTTAAGAG 48949498 48949479 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000217 t4113 MF14 1 Others t4113.G001 DM_v4.03 ST4.03ch07 AATTATATGAGTCTGCTTCACTT 53734538 53734560 CTTAGTGAAAATTGTGAGGTC 53735139 53735119 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000218 t4113 TM25 1 Others t4113.G001 DM_v4.03 ST4.03ch07 AACTATGTCTATATATGTGTAGTT 56364862 56364885 CGACTGAACTTAGAAGATTAAG 56365818 56365797 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000219 t4113 MF15 1 Others t4113.G001 DM_v4.03 ST4.03ch07 TCAAAAATGGCATCAGCTCTG 56067976 56067996 CCACATCAATTTCACATAAATCA 56068483 56068461 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000022.1 t4113 jr78-2F-jr78-2R 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch09 CGGGAGGAACGAAGGAACTAG 60957004 60957024 AAACACGGGACTTTGGACGAG 60958149 60958129 10.1093/jxb/ery021 29385612 1 DM_v4.03 t4113.P0000220 t4113 TM22 1 Others t4113.G001 DM_v4.03 ST4.03ch07 CAAACCTCCACACAACTCA 56067960 56067978 AGCTACTGCATTACAAACAAA 56068505 56068485 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000221 t4113 TM46 1 Others t4113.G001 DM_v4.03 ST4.03ch07 CATTCTTGAGCAATCTGTGAG 54329033 54329053 GTGCTCCATCAATTTCAGCAA 54329580 54329560 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000222 t4113 TM27 1 Others t4113.G001 DM_v4.03 ST4.03ch08 TTCTTCTCACTGTCACACC 46879159 46879177 GGTCTTAGGTCAAAATTGGAG 46880058 46880038 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000223 t4113 MF13 1 Others t4113.G001 DM_v4.03 ST4.03ch08 TGTCAAGCAGTGCAGTAAGG 48022040 48022059 TCAGTTGGTGTCTCATCCTTA 48022788 48022768 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000224 t4113 TM26 1 Others t4113.G001 DM_v4.03 ST4.03ch08 TAAGGTTTTGAACCAAGTTGTTA 48022055 48022077 TCCACTATTCAGTTGGTGTCT 48022796 48022776 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000225 t4113 TM47 1 Others t4113.G001 DM_v4.03 ST4.03ch08 ATGAACTCAAGTGTATTGGCTT 5482300 5482321 TCTCTGAGTTTGAAGAATTGTTA 5483147 5483125 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000226 t4113 TM28 1 Others t4113.G001 DM_v4.03 ST4.03ch09 GCTAATGCTACAGAGTCTCTA 50464834 50464854 CTACTTTGATAGTGTTAGCATAT 50466020 50465998 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000227 t4113 MF16 1 Others t4113.G001 DM_v4.03 ST4.03ch10 CCATCCATAACTAATACTACTG 38265411 38265432 CTAATAATACTTAATTAGTGGACA 38265918 38265895 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000228 t4113 TM29 1 Others t4113.G001 DM_v4.03 ST4.03ch10 ACAACTTTATCAGCCGAGGTA 59616944 59616964 AGCTCCAGGACATGATAAATG 59617455 59617435 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000229 t4113 TM30 1 Others t4113.G001 DM_v4.03 ST4.03ch10 ACTTCCAGTGGCAATAAACTC 56090969 56090989 ATTCATTCTCCAAGACGCTAC 56091509 56091489 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000023.1 t4113 8384-1F-8384-1R 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch09 ATAGGAGGTTGAGCAACGTGAA 61040518 61040539 GGCTGTAGGTGAGAGAGGGTAT 61041977 61041956 10.1093/jxb/ery021 29385612 1 DM_v4.03 t4113.P0000230 t4113 TM3 1 Others t4113.G001 DM_v4.03 ST4.03ch11 GGTTCAAAACAATGGCATTAAC 41832046 41832067 TGCCGAGTTTTTCAGCTTCG 41832951 41832932 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000231 t4113 TM37 1 Others t4113.G001 DM_v4.03 ST4.03ch11 TGAAATCGATAGCGAAAGCAG 41833039 41833059 GAACAAGCAAGTATTTTGGGAT 41833778 41833757 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000232 t4113 TM38 1 Others t4113.G001 DM_v4.03 ST4.03ch11 AGGTGACAATTACCAAGGACT 41842860 41842880 GTAATGGTACTTTTGGTTTGTC 41843325 41843304 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000233 t4113 TM39 1 Others t4113.G001 DM_v4.03 ST4.03ch11 AACTAGGGGAATTAAGTGTTCT 41843457 41843478 TCCGTTCTAAAGGACAAGACA 41844052 41844032 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000234 t4113 MF17 1 Others t4113.G001 DM_v4.03 ST4.03ch11 GAAATTACTCAATCAAAAGGTTT 43823730 43823752 GCCTTTTCCCATCTATACATAA 43824564 43824543 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000235 t4113 TM32 1 Others t4113.G001 DM_v4.03 ST4.03ch12 TTGAAACGGACGGAATAAGTAA 609687 609708 TGTGGAGCTACAAGTCTGAAT 610214 610194 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000236 t4113 TM31 1 Others t4113.G001 DM_v4.03 ST4.03ch12 CAAACTCCGATCCAAACGCA 54981348 54981367 GCTGTGCAGCAATATCTTCAA 54981943 54981923 NA NA 0 0 NA NA 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P0000237 t4113 57R 1 Others t4113.G007 St2_haplotype_genome Chr5 TGCCTGCCTCTCCGATTTCT 51828247 51828266 GGTTCAGCAAAAGCAAGGACGTG 51829633 51829611 NA NA 0 0 NA NA NA 10.1270/jsbbs.22094 37840978 1 Otava haplotype St2 t4113.P0000238 t4113 57R-887 1 Others t4113.G007 St2_haplotype_genome NA GGCCTGTGTACTATCGATAACCAAG 0 0 GGTTCAGCAAAAGCAAGGACGTG 0 0 NA NA 0 0 NA NA NA 10.1270/jsbbs.22094 37840978 1 Otava haplotype St2 t4113.P0000239 t4113 TG689 1 Others t4113.G007 St2_haplotype_genome NA TAAAACTCTTGGTTATAGCCTAT 0 0 CAATAGAATGTGTTGTTTCACCAA 0 0 NA NA 0 0 NA NA NA 10.1270/jsbbs.22094 37840978 1 Otava haplotype St2 t4113.P000024.1 t4113 8586-1F-8586-1R 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch09 AGTTTACCCATTTCCCATTCC 61050190 61050210 CCCCGGTTGTAGTTTATGTTC 61051170 61051150 10.1093/jxb/ery021 29385612 1 DM_v4.03 t4113.P0000240 t4113 BCH 1 Others t4113.G007 St2_haplotype_genome Chr3 CATGACATAGTTTGAATTTTGAGTC 38697128 38697152 CGTTTGGCGCTGCCGTAAGTT 38697414 38697394 NA NA 0 0 NA NA NA 10.1270/jsbbs.22094 37840978 1 Otava haplotype St2 t4113.P0000241 t4113 Gro1-4-1 1 Others t4113.G007 St2_haplotype_genome NA AAGCCACAACTCTACTGGAG 0 0 GATATAGTACGTAATCATGCC 0 0 NA NA 0 0 NA NA NA 10.1270/jsbbs.22094 37840978 1 Otava haplotype St2 t4113.P0000242 t4113 Sha 1 Others t4113.G007 St2_haplotype_genome Chr11 ATCGTTGTCATGCTATGAGATTGTT 49943452 49943475 CTTCAAGGTAGTGGGCAGTATGCTT 49944523 49944499 NA NA 0 0 NA NA NA 10.3390/plants11101319 35631743 1 Otava haplotype St2 t4113.P0000243 t4113 R3b 1 Others t4113.G007 St2_haplotype_genome NA GTCGATGAATGCTATGTTTCTCGAGA 0 0 ACCAGTTTCTTGCAATTCCAGATTG 0 0 NA NA 0 0 NA NA NA 10.3390/plants11101319 35631743 1 Otava haplotype St2 t4113.P0000244 t4113 45/XI 1 Others t4113.G007 St2_haplotype_genome NA AGAGAGGTTGTTTCCGATAGACC 0 0 TCGTTGTAGTTGTCATTCCACAC 0 0 NA NA 0 0 NA NA NA 10.3390/plants11101319 35631743 1 Otava haplotype St2 t4113.P0000245 t4113 184-81 1 Others t4113.G007 St2_haplotype_genome Chr9 CCACCGTATGCTCCGCCGTC 62840327 62840346 GTTCCACTTAGCCTTGTCTTGCTCA 62841007 62840983 NA NA 0 0 NA NA NA 10.3390/plants11101319 35631743 1 Otava haplotype St2 t4113.P000025.1 t4113 sjj236F-sjj236R 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch09 ACAGAAGCCACAACACAAA 61240869 61240887 AGCCAAAGCAAGTTCAAAT 61241399 61241381 10.1093/jxb/ery021 29385612 1 DM_v4.03 t4113.P0000258 t4113 Eyd4 1 Others t4113.G007 St2_haplotype_genome Chr10 GGTGAACTCTCTCAATTC 30272717 30272734 CCTAATATAGCTGATTCCTTGTTCC 30273332 30273308 NA NA 0 0 574 BsaXI NA 10.3390/ijms23031470 35163389 1 Otava haplotype St2 t4113.P0000259 t4113 Eyd15 1 Others t4113.G007 St2_haplotype_genome Chr10 GCTCCTTGAGTATTGTCCTATCAGC 29765230 29765254 CAGTCCACCGTACATGAAGCTATAC 29765910 29765886 NA NA 0 0 632 BsaXI NA 10.3390/ijms23031470 35163389 1 Otava haplotype St2 t4113.P000026.1 t4113 sjj214F-sjj214R 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch09 AGAGCGGAGGAGAGTTTT 61400965 61400982 GGGTTTGCCATTGTTTAG 61401870 61401853 10.1093/jxb/ery021 29385612 1 DM_v4.03 t4113.P0000260 t4113 Eyd17 1 Others t4113.G007 St2_haplotype_genome Chr10 GTGATGTACGCGAACTTTAC 30868638 30868657 CAAGACATCTCATTCGTTGG 30869270 30869251 NA NA 0 0 586 BsaXI NA 10.3390/ijms23031470 35163389 1 Otava haplotype St2 t4113.P0000261 t4113 Eyd41 1 Others t4113.G007 St2_haplotype_genome Chr10 CGAGTAGTCACATTGAAAG 28521325 28521342 CTAATAGCATGTGACCTAGTATGC 28521850 28521827 NA NA 0 0 485 BsaXI NA 10.3390/ijms23031470 35163389 1 Otava haplotype St2 t4113.P0000262 t4113 Eyd42 1 Others t4113.G007 St2_haplotype_genome Chr10 GACATCTTGTCAATCAACACTTCAC 28522043 28522067 CAACACATGTTGACCATGTAAGGG 28522862 28522839 NA NA 0 0 771 BsaXI NA 10.3390/ijms23031470 35163389 1 Otava haplotype St2 t4113.P0000263 t4113 Eyd49 1 Others t4113.G007 St2_haplotype_genome Chr10 GTACACCCCTACACAATAGAGTG 29497129 29497151 ACCTCTTACATCTCCTCACTTGGG 29497870 29497847 NA NA 0 0 706 BsaXI NA 10.3390/ijms23031470 35163389 1 Otava haplotype St2 t4113.P0000264 t4113 LRo82 1 Others t4113.G007 St2_haplotype_genome Chr4 TAGGTTGTTAATATGTGCCCAAAA 70879015 70879038 AAAAGAAAACTTGAGCGCATCG 70879186 70879165 NA NA 0 0 172 NA NA 10.3390/ijms23031470 35163389 1 Otava haplotype St2 t4113.P0000265 t4113 Glucose_1_F__Glucose_1_R 1 Others t4113.G007 St2_haplotype_genome Chr12 ACTTCTCGTACTCCGAAACGG 54353668 54353687 AACCAATCCCCTTAGCCGTG 54354154 54354134 NA NA 0 0 NA NA NA 10.3390/ijms23031470 35163389 1 Otava haplotype St2 t4113.P0000266 t4113 Glucose_2_F__Glucose_2_R 1 Others t4113.G007 St2_haplotype_genome Chr12 TCAGTGGCGTACAACACCAT 62167803 62167822 GTGCTGCTCCGTGGTATTCA 62167994 62167975 NA NA 0 0 NA NA NA 10.3390/ijms23031470 35163389 1 Otava haplotype St2 t4113.P0000267 t4113 Glucose_3_F__Glucose_3_R 1 Others t4113.G007 St2_haplotype_genome Chr7 CATCACGGAGGCGATAAGGG 3611786 3611805 GACTTTCGAGTCCGGCTTCA 3611946 3611927 NA NA 0 0 NA NA NA 10.3390/ijms23031470 35163389 1 Otava haplotype St2 t4113.P0000268 t4113 Glucose_4_F__Glucose_4_R 1 Others t4113.G007 St2_haplotype_genome Chr1 TCTTGGTCCTTCCATCGGGT 91365398 91365417 CAACGCCTGTCTCATCTGCT 91365499 91365480 NA NA 0 0 NA NA Blast_hit_num.:2 10.3390/ijms23031470 35163389 1 Otava haplotype St2 t4113.P0000269 t4113 ABA_1_F__ABA_1_R 1 Others t4113.G007 St2_haplotype_genome Chr4 ACATCACCGTTTGTTCCACC 57802822 57802840 TTTGCCTTGTGCTTCTCATGC 57803423 57803403 NA NA 0 0 NA NA NA 10.3390/ijms23031470 35163389 1 Otava haplotype St2 t4113.P0000270 t4113 ABA_2_F__ABA_2_R 1 Others t4113.G007 St2_haplotype_genome Chr6 CGCCGATTCGATAACCCACA 30404186 30404205 CGGAAGTCCCGATACAACCA 30404299 30404280 NA NA 0 0 NA NA NA 10.3390/ijms23031470 35163389 1 Otava haplotype St2 t4113.P0000271 t4113 IAA_1_F__IAA_1_R 1 Others t4113.G007 St2_haplotype_genome Chr2 TGGTCCCAGCCCTGATAAAG 33731269 33731288 TTGTCGGCATCGACAGAGAC 33731564 33731545 NA NA 0 0 NA NA NA 10.3390/ijms23031470 35163389 1 Otava haplotype St2 t4113.P0000272 t4113 IAA_2_F__IAA_2_R 1 Others t4113.G007 St2_haplotype_genome Chr3 GGAGCAAGCAAGAGCTACCA 2048070 2048089 GGATTGAACACGCTCCTCCA 2048212 2048193 NA NA 0 0 NA NA NA 10.3390/ijms23031470 35163389 1 Otava haplotype St2 t4113.P0000273 t4113 IAA_3_F__IAA_3_R 1 Others t4113.G007 St2_haplotype_genome Chr9 TGAGCTGAGGTTAGGTTTGCC 59059158 59059177 GGCAACAGGTGGGGTTTTGA 59059320 59059300 NA NA 0 0 NA NA NA 10.3390/ijms23031470 35163389 1 Otava haplotype St2 t4113.P0000274 t4113 GA__1_F__GA__1_R 1 Others t4113.G007 St2_haplotype_genome Chr1 GAGGCATGTCGAAAGCATGG 75024094 75024113 ACAAGGGGCTTCCCAAAGAA 75024203 75024184 NA NA 0 0 NA NA NA 10.3390/ijms23031470 35163389 1 Otava haplotype St2 t4113.P0000275 t4113 GA__2_F__GA__2_R 1 Others t4113.G007 St2_haplotype_genome Chr2 GAGGTGCAGCAAATCGTCTC 39515940 39515959 AGCAAGGGCATGCTTCGTAA 39516055 39516036 NA NA 0 0 NA NA NA 10.3390/ijms23031470 35163389 1 Otava haplotype St2 t4113.P0000276 t4113 GA__3_F__GA_3_R 1 Others t4113.G007 St2_haplotype_genome Chr2 AGTCCCACCTGATCCCTACTC 30015963 30015982 TGGCCCTCCAAAGTAAACCA 30016381 30016361 NA NA 0 0 NA NA NA 10.3390/ijms23031470 35163389 1 Otava haplotype St2 t4113.P0000277 t4113 490qPCR_F__490qPCR_R 1 Others t4113.G007 St2_haplotype_genome Chr4 AATGGAACTTTGCGAAACTGGC 70817834 70817855 TTGGTGGATGAGCTTCTGTATG 70818676 70818655 NA NA 0 0 NA NA NA 10.3390/ijms23031470 35163389 1 Otava haplotype St2 t4113.P0000278 t4113 500qPCR_F__500qPCR_R 1 Others t4113.G007 St2_haplotype_genome Chr4 GACGGAGGTGAAGAGTATGGAG 70842081 70842102 ATGTGGTGGAAAGTCTGAAATG 70842257 70842236 NA NA 0 0 NA NA NA 10.3390/ijms23031470 35163389 1 Otava haplotype St2 t4113.P0000279 t4113 530_RLK_qPCR_F__530_RLK_qPCR_R 1 Others t4113.G007 St2_haplotype_genome NA GCCATGCCATGTTGACTGAT 0 0 AAAGGAGGCTTGCCCGTGAG 0 0 NA NA 0 0 NA NA NA 10.3390/ijms23031470 35163389 1 Otava haplotype St2 t4113.P0000280 t4113 560_WRKY_qPCR_F__560_WRKY_qPCR_R 1 Others t4113.G007 St2_haplotype_genome NA TCTCCGAATTTATTCTACCC 0 0 CTGATGACAATGCTGCTCTA 0 0 NA NA 0 0 NA NA NA 10.3390/ijms23031470 35163389 1 Otava haplotype St2 t4113.P0000281 t4113 550_AAase_qPCR_F__550_AAase_qPCR_R 1 Others t4113.G007 St2_haplotype_genome Chr4 AAGCCACCACGACATACAAA 70900864 70900883 TTGCCACTCATCCAGTTCTTC 70900984 70900964 NA NA 0 0 NA NA NA 10.3390/ijms23031470 35163389 1 Otava haplotype St2 t4113.P0000282 t4113 580_lung_qPCR_F__581_lung_qPCR_R 1 Others t4113.G007 St2_haplotype_genome NA TTTCAATGGGTTATGGTGTC 0 0 TTTCAATGGGTTATGGTGTC 0 0 NA NA 0 0 NA NA NA 10.3390/ijms23031470 35163389 1 Otava haplotype St2 t4113.P0000283 t4113 610_EF_P_qPCR_F__610_EF_P_qPCR_R 1 Others t4113.G007 St2_haplotype_genome NA CAGGGAACAGCGTTGAGAAA 0 0 TGAAGACATACTGGGCACCA 0 0 NA NA 0 0 NA NA NA 10.3390/ijms23031470 35163389 1 Otava haplotype St2 t4113.P0000284 t4113 650_Kinase_qPCR_F__650_Kinase_qPCR_R 1 Others t4113.G007 St2_haplotype_genome Chr4 GTAACAACGAGTAGGGCACG 71005171 71005190 GAGGCTGAGGAACTGATGAC 71005324 71005305 NA NA 0 0 NA NA NA 10.3390/ijms23031470 35163389 1 Otava haplotype St2 t4113.P0000285 t4113 840_nsLTP_qPCR_F__840_nsLTP_qPCR_R 1 Others t4113.G007 St2_haplotype_genome Chr4 AGGCATTAACTTGTGGTCAA 71165769 71165792 TCGATCCGCGGTAGTCTTGGCTGA 71165902 71165883 NA NA 0 0 NA NA NA 10.3390/ijms23031470 35163389 1 Otava haplotype St2 t4113.P0000286 t4113 GWDex7 1 Others t4113.G007 St2_haplotype_genome Chr5 GGAATATGAGGCTGCTCGAACT 10921894 10921915 TCTGCTCCTCCTTCTCCTTGGC 10922520 10922499 NA NA 0 0 NA NA NA 10.1007/s11103-021-01236-7 34994920 1 Otava haplotype St2 t4113.P0000287 t4113 GWD56 1 Others t4113.G007 St2_haplotype_genome Chr5 TGAAATAAGCAAGGCTCAGGAC 10924544 10924565 ATAGTGACCTAAATCACGCAAA 10925149 10925128 NA NA 0 0 NA NA NA 10.1007/s11103-021-01236-7 34994920 1 Otava haplotype St2 t4113.P0000288 t4113 GWD_G1 1 Others t4113.G007 St2_haplotype_genome Chr5 TCTTTGAACAGCTAGCAGAAAA 10920027 10920048 GCAGCTCTTTAACCAAAATG 10920714 10920695 NA NA 0 0 NA NA NA 10.1007/s11103-021-01236-7 34994920 1 Otava haplotype St2 t4113.P0000289 t4113 GWD_G2 1 Others t4113.G007 St2_haplotype_genome NA AACCAGGAAGTAGGAACCAG 0 0 CACACTCCCATCTCATGTTG 0 0 NA NA 0 0 NA NA NA 10.1007/s11103-021-01236-7 34994920 1 Otava haplotype St2 t4113.P0000290 t4113 GWD_G34 1 Others t4113.G007 St2_haplotype_genome NA AACAACCATCCAAACAAGGT 0 0 CCAGGACTTTTGGATAATGC 0 0 NA NA 0 0 NA NA NA 10.1007/s11103-021-01236-7 34994920 1 Otava haplotype St2 t4113.P0000291 t4113 GWD_G5 1 Others t4113.G007 St2_haplotype_genome NA TGTTCGACTGTGGACAAAAC 0 0 AGGGTTGCTATGTGAATGGT 0 0 NA NA 0 0 NA NA NA 10.1007/s11103-021-01236-7 34994920 1 Otava haplotype St2 t4113.P0000292 t4113 GWD_G6 1 Others t4113.G007 St2_haplotype_genome Chr5 TAATGGTGATCCATTTGCAG 10926549 10926568 CAGAGAGTGCGAGATTTTCA 10927319 10927300 NA NA 0 0 NA NA NA 10.1007/s11103-021-01236-7 34994920 1 Otava haplotype St2 t4113.P0000293 t4113 GWD_G7 1 Others t4113.G007 St2_haplotype_genome Chr5 TCAAGCTCTTTCAATGTCCA 10928004 10928023 AATCCTTCCTTCCTTTGCTT 10929084 10929065 NA NA 0 0 NA NA NA 10.1007/s11103-021-01236-7 34994920 1 Otava haplotype St2 t4113.P0000294 t4113 GWD_end_2 1 Others t4113.G007 St2_haplotype_genome NA GGATGAGGAGGAAAAAGTTG 0 0 TGCAATACATAATGCGTGTG 0 0 NA NA 0 0 NA NA NA 10.1007/s11103-021-01236-7 34994920 1 Otava haplotype St2 t4113.P0000295 t4113 GWD_HRM_#1 1 Others t4113.G007 St2_haplotype_genome Chr5 CTTGAGCTTGAGAAAGGCAT 10922268 10922287 CAAAGTCTCTCTTCTTTCTTTGGAT 10922406 10922382 NA NA 0 0 NA NA NA 10.1007/s11103-021-01236-7 34994920 1 Otava haplotype St2 t4113.P0000297 t4113 HC-I 1 Others t4113.G007 St2_haplotype_genome NA GTAGTACATCAACATACATTTTGCGG 0 0 GCCTTACTTCCCTGCTGAAG 0 0 NA NA 0 0 490 NA NA 10.1270/jsbbs.20134 34776742 1 Otava haplotype St2 t4113.P0000298 t4113 HC-I2 1 Others t4113.G007 St2_haplotype_genome Chr5 GTAGTACATCAACATACATTTTGCGG 5823459 5823481 GGTGACTAAGATGGAAATCAGAG 5823916 5823891 NA NA 0 0 458 NA NA 10.1270/jsbbs.20134 34776742 1 Otava haplotype St2 t4113.P0000299 t4113 N195 1 Others t4113.G007 St2_haplotype_genome NA TGGAAATGGCACCCACTA 0 0 CATCATGGTTTCACTTGTCAC 0 0 NA NA 0 0 337 NA NA 10.1270/jsbbs.20134 34776742 1 Otava haplotype St2 t4113.P0000300 t4113 GBSS 1 Others t4113.G007 St2_haplotype_genome Chr12 ATAGGAATGTCAAGTGGTAGCG 61381006 61381027 TAGGCAAGAGAATCAAAATCAG 61381435 61381414 NA NA 0 0 441 NA NA 10.1270/jsbbs.20134 34776742 1 Otava haplotype St2 t4113.P0000301 t4113 gbss-03__GBSS1 R2 1 Others t4113.G007 St2_haplotype_genome Chr12 ATAGGAATGTCAAGTGGTAGCG 61380795 61380817 GACAAGGTTGATTTGGTGTCTAG 61381435 61381414 NA NA 0 0 641 NA NA 10.1270/jsbbs.20134 34776742 1 Otava haplotype St2 t4113.P0000302 t4113 Action 1 Others t4113.G007 St2_haplotype_genome Chr12 AGATGCTTACGCTGGATGGAATGC 24462065 24462088 TTCCGGTGTGGTTGGATTCTGTTC 24462230 24462207 NA NA 0 0 NA NA Blast_hit_num.:5 10.3389/fgene.2021.714575 34659338 1 Otava haplotype St2 t4113.P0000303 t4113 PGSC0003DMG400000043 1 Others t4113.G007 St2_haplotype_genome Chr1 AGCAGCTCAAGCACAGAACTCTTC 75732118 75732141 CACGCTCCACCTCCAATTCATCTC 75732263 75732240 NA NA 0 0 NA NA NA 10.3389/fgene.2021.714575 34659338 1 Otava haplotype St2 t4113.P0000304 t4113 PGSC0003DMG400028682 1 Others t4113.G007 St2_haplotype_genome Chr11 TGGGCATCAACATTAACCCCAAA 8209120 8209142 CCAACCAGACAGGCTAGCCA 8209206 8209187 NA NA 0 0 NA NA NA 10.3389/fgene.2021.714575 34659338 1 Otava haplotype St2 t4113.P0000348 t4113 GBSS_potato 1 Others t4113.G007 St2_haplotype_genome Chr12 ATGGCAAGCATCACAG 61379886 61379903 CAAAACTTTAGGTGCCTC 61380868 61380853 NA NA 0 0 981 NA NA 10.1111/pbi.13633 34008333 1 Otava haplotype St2 t4113.P0000349 t4113 H1-N146 1 Others t4113.G007 St2_haplotype_genome NA AAGCTCTTGCCTAGTGCTC 0 0 AGGCGGAACATGCCATG 0 0 NA NA 0 0 506 NA NA 10.1111/pbi.13633 34008333 1 Otava haplotype St2 t4113.P0000350 t4113 H1-N195 1 Others t4113.G007 St2_haplotype_genome NA TGGAAATGGCACCCACTA 0 0 CATCATGGTTTCACTTGTCAC 0 0 NA NA 0 0 337 NA NA 10.1111/pbi.13633 34008333 1 Otava haplotype St2 t4113.P0000351 t4113 Chr5:52358101/T 1 Others t4113.G007 St2_haplotype_genome NA TTGCTGGAGCTCTGTTAAGG 0 0 CTGACTGGAAAAAGAAAGTGA 0 0 NA NA 0 0 323 NA NA 10.1111/pbi.13633 34008333 1 Otava haplotype St2 t4113.P0000352 t4113 GBSS_sweetpotato 1 Others t4113.G007 St2_haplotype_genome NA GCATCATTCCACGCCTCTG 0 0 CTACCAGCTCAATATGCAGAC 0 0 NA NA 0 0 850 NA NA 10.1111/pbi.13633 34008333 1 Otava haplotype St2 t4113.P0000353 t4113 Chr12:20608324/G 1 Others t4113.G007 St2_haplotype_genome NA ATGTTCAGAAGGTGTGGACTG 0 0 GACTAATATCTGCTATATTTGAC 0 0 NA NA 0 0 314 NA NA 10.1111/pbi.13633 34008333 1 Otava haplotype St2 t4113.P0000561 t4113 ABCfwd__ABCrev 1 Others t4113.G007 St2_haplotype_genome Chr3 GAATAACCACACAACTCAAC 7730702 7730721 AGATTGGTAACAACCATCCA 7731358 7731339 NA NA 0 0 NA NA NA 10.1093/jxb/erab078 33681961 1 Otava haplotype St2 t4113.P0000562 t4113 ABCattBFwd__ABCattBRev 1 Others t4113.G007 St2_haplotype_genome NA GGGGACAAGTTTGTACAAAAAAGCAGGCTGAGGGGTCAATTCATTGTACACATT 0 0 GGGGACCACTTTGTACAAGAAAGCTGGGTTCATGTCACTATTGATGATGGCTATT 0 0 NA NA 0 0 NA NA NA 10.1093/jxb/erab078 33681961 1 Otava haplotype St2 t4113.P0000563 t4113 pRS300a__pRS300b 1 Others t4113.G007 St2_haplotype_genome NA CTGCAAGGCGATTAAGTTGGGTAAC 0 0 GCGGATAACAATTTCACACAGGAAACAG 0 0 NA NA 0 0 701 NA NA 10.1093/jxb/erab078 33681961 1 Otava haplotype St2 t4113.P0000564 t4113 pRS300aTOPO__pRS300b 1 Others t4113.G007 St2_haplotype_genome NA CACCCTGCAAGGCGATTAAGTTGGGTAAC 0 0 GCGGATAACAATTTCACACAGGAAACAG 0 0 NA NA 0 0 705 NA NA 10.1093/jxb/erab078 33681961 1 Otava haplotype St2 t4113.P0000565 t4113 abc1_miR-s_I__abc1_miR-a_II 1 Others t4113.G007 St2_haplotype_genome NA GATAGATTGGTAACAACCGTCTATCTCTCTTTGTATTCC 0 0 GATAGACGGTTGTTACCAATCTATCAAAGAGAATCAATGA 0 0 NA NA 0 0 NA NA NA 10.1093/jxb/erab078 33681961 1 Otava haplotype St2 t4113.P0000566 t4113 abc1_miR-s_III__pRS300b 1 Others t4113.G007 St2_haplotype_genome NA GATAACGGTTGTTAGCAATCTTTCACAGGTCGTGATATG 0 0 GCGGATAACAATTTCACACAGGAAACAG 0 0 NA NA 0 0 451 NA NA 10.1093/jxb/erab078 33681961 1 Otava haplotype St2 t4113.P0000567 t4113 pRS300a__abc1_miR-a_IV 1 Others t4113.G007 St2_haplotype_genome NA CTGCAAGGCGATTAAGTTGGGTAAC 0 0 GAAAGATTGCTAACAACCGTTTATCTACATATATATTCCT 0 0 NA NA 0 0 274 NA NA 10.1093/jxb/erab078 33681961 1 Otava haplotype St2 t4113.P0000568 t4113 Colonyfwd1__pMDCrev 1 Others t4113.G007 St2_haplotype_genome NA GCTTCCGACTCATTCATCC 0 0 TGTGCAATGTAACATCAGAGATT 0 0 NA NA 0 0 NA NA NA 10.1093/jxb/erab078 33681961 1 Otava haplotype St2 t4113.P0000569 t4113 N2258__O2439c 1 Others t4113.G007 St2_haplotype_genome NA GTCGATCACGAAACGCAGACA 0 0 CCCAAGTTCAGGGCATGCAT 0 0 NA NA 0 0 NA NA NA 10.1093/jxb/erab078 33681961 1 Otava haplotype St2 t4113.P0000570 t4113 N5707__A6032m 1 Others t4113.G007 St2_haplotype_genome NA GTGTCTCACCAGGGCAAGAAC 0 0 CTTGCGGACATCACTAAAGCG 0 0 NA NA 0 0 NA NA NA 10.1093/jxb/erab078 33681961 1 Otava haplotype St2 t4113.P0000571 t4113 S5585m__O6266c 1 Others t4113.G007 St2_haplotype_genome NA GGATCTCAAGTTGAAGGGGAC 0 0 CTCCTGTGCTGGTATGTCCT 0 0 NA NA 0 0 NA NA NA 10.1093/jxb/erab078 33681961 1 Otava haplotype St2 t4113.P0000572 t4113 O2172__N2650c 1 Others t4113.G007 St2_haplotype_genome NA CAACTATGATGGATTTGGCGA 0 0 TGATCCACAACTTCACCGCTA 0 0 NA NA 0 0 NA NA NA 10.1093/jxb/erab078 33681961 1 Otava haplotype St2 t4113.P0000573 t4113 18S-rRNA-Fwd__18S-rRNA-Rev 1 Others t4113.G007 St2_haplotype_genome Chr1 GGGCATTCGTATTTCATAGTCAGAG 96888354 96888378 CGGTTCTTGATTAATGAAAACATCCT 96888452 96888429 NA NA 0 0 101 NA Blast_hit_num.:15 10.1093/jxb/erab078 33681961 1 Otava haplotype St2 t4113.P0000574 t4113 L2-Fwd__L2-Rev 1 Others t4113.G007 St2_haplotype_genome Chr10 GGCGAAATGGGTCGTGTTAT 1391475 1391494 CATTTCTCTCGCCGAAATCG 1391595 1391576 NA NA 0 0 121 NA NA 10.1093/jxb/erab078 33681961 1 Otava haplotype St2 t4113.P0000575 t4113 EF1a-Fwd1__EF1a-Rev1 1 Others t4113.G007 St2_haplotype_genome Chr6 CTGGTATGGTTGTGACCTTTG 8349238 8349258 TTGAACCCAACATTGTCACC 8349349 8349330 NA NA 0 0 120 NA NA 10.1093/jxb/erab078 33681961 1 Otava haplotype St2 t4113.P0000576 t4113 Po_qPCR-9F__Po_qPCR-9R 1 Others t4113.G007 St2_haplotype_genome NA TTTGAGAGTTCGCCGTGGTT 0 0 ACAATGAATTGACCCCTCCGA 0 0 NA NA 0 0 102 NA NA 10.1093/jxb/erab078 33681961 1 Otava haplotype St2 t4113.P0000577 t4113 PVYF__PVYR 1 Others t4113.G007 St2_haplotype_genome NA ATACTCGRGCAACTCAATCACA 0 0 CCATCCATCATAACCCAAACTC 0 0 NA NA 0 0 166 NA NA 10.1093/jxb/erab078 33681961 1 Otava haplotype St2 t4113.P0000578 t4113 StEF1-alpha-F__StER1-alpha-R 1 Others t4113.G007 St2_haplotype_genome Chr6 AGGTTCTAGTTCTCTGCCTTGTATGTC 8349911 8349937 CGCCACCGCCTATCAAGTAC 8349979 8349960 NA NA 0 0 69 NA NA 10.1093/jxb/erab078 33681961 1 Otava haplotype St2 t4113.P0000579 t4113 StUbq-F__StUbq-R 1 Others t4113.G007 St2_haplotype_genome Chr7 CTCCGTGGTGGTATGCAGAT 49603212 49603231 CACGTTGTCAATGGTGTCG 49603301 49603283 NA NA 0 0 90 NA NA 10.1093/jxb/erab078 33681961 1 Otava haplotype St2 t4113.P0000580 t4113 StERF3-F StERF3-R 1 Others t4113.G007 St2_haplotype_genome Chr10 GTGTTGACGTGAAACCAACCAT 4331944 4331965 CCGGTGGAGGAAAGTTAAGGT 4332003 4331983 NA NA 0 0 60 NA NA 10.1093/jxb/erab078 33681961 1 Otava haplotype St2 t4113.P0000581 t4113 StJas-F__StJas-R 1 Others t4113.G007 St2_haplotype_genome Chr12 CTCAACAAACAGCTACCACCAC 54266681 54266702 CGATGAATCACTTGATTTCTCAAT 54266757 54266734 NA NA 0 0 74 NA NA 10.1093/jxb/erab078 33681961 1 Otava haplotype St2 t4113.P0000582 t4113 StPAL1-F__StPAL1-R 1 Others t4113.G007 St2_haplotype_genome Chr3 TTGCACAAGTTGCATCCATT 28340157 28340176 CACCAGCTCTTGCACTTTCA 28340240 28340221 NA NA 0 0 84 NA NA 10.1093/jxb/erab078 33681961 1 Otava haplotype St2 t4113.P0000583 t4113 StPR1b-F__StPR1b-R 1 Others t4113.G007 St2_haplotype_genome Chr9 GGCATCCCGAGCACAAAAT 6418229 6418249 CTGCACCGGAATGAATCAAGT 6418296 6418278 NA NA 0 0 68 NA NA 10.1093/jxb/erab078 33681961 1 Otava haplotype St2 t4113.P0000584 t4113 StPR5-F__StPR5-R 1 Others t4113.G007 St2_haplotype_genome Chr12 GGAGGCAGACGACTCGACTT 7450322 7450342 CCATGGTTGTTCCTGGATTCA 7450385 7450367 NA NA 0 0 64 NA NA 10.1093/jxb/erab078 33681961 1 Otava haplotype St2 t4113.P0000585 t4113 StWRKY-F__StWRKY-R 1 Others t4113.G007 St2_haplotype_genome Chr8 AAAATATGGTCAAAAAGTGACAAGAG 40594681 40594706 CATGTTGGTGCAAATGAACAC 40594755 40594735 NA NA 0 0 75 NA NA 10.1093/jxb/erab078 33681961 1 Otava haplotype St2 t4113.P0000586 t4113 UnCh835 1 Others t4113.G007 St2_haplotype_genome Chr1 AGCACCATCGTCTCATTATC 10041037 10041056 AAATGACCAAGTGCACCTAC 10041213 10041194 NA NA 0 0 189 NA NA 10.1038/s41598-020-74285-5 33051578 1 Otava haplotype St2 t4113.P0000587 t4113 PGCRURSE5 1 Others t4113.G007 St2_haplotype_genome Chr1 ACTCAATTCCTCCTTCATCAGC 83504826 83504847 TTGGAATGTGGTGCTGTACT 83505030 83505011 NA NA 0 0 205 NA NA 10.1038/s41598-020-74285-5 33051578 1 Otava haplotype St2 t4113.P0000588 t4113 9-DES 1 Others t4113.G007 St2_haplotype_genome NA TGGTTTCCCTATAATTAGCGCG 0 0 ACCAAGAGTGTCAGTTTGTCG 0 0 NA NA 0 0 230 NA NA 10.1038/s41598-020-74285-5 33051578 1 Otava haplotype St2 t4113.P0000589 t4113 IRL 1 Others t4113.G007 St2_haplotype_genome Chr4 TTTTGAGATAGAGCCATCGT 68334525 68334544 CCCGTCTCTGATGACATAGT 68334730 68334711 NA NA 0 0 206 NA NA 10.1038/s41598-020-74285-5 33051578 1 Otava haplotype St2 t4113.P0000590 t4113 R1B-23 1 Others t4113.G007 St2_haplotype_genome NA ACTCATGACACTTTTGCGATTCT 0 0 ACAACAACGAGGACTCAAACC 0 0 NA NA 0 0 234 NA NA 10.1038/s41598-020-74285-5 33051578 1 Otava haplotype St2 t4113.P0000591 t4113 ANR 1 Others t4113.G007 St2_haplotype_genome Chr4 AACAAATGCACTAGCACACA 9999719 9999738 CTTGTTGGAGGAACAACACT 9999943 9999924 NA NA 0 0 225 NA NA 10.1038/s41598-020-74285-5 33051578 1 Otava haplotype St2 t4113.P0000592 t4113 Pat3-k1 1 Others t4113.G007 St2_haplotype_genome NA GGCACTAATTCAGAGTTTGC 0 0 CACAGAAGCATCATCAAATG 0 0 NA NA 0 0 228 NA NA 10.1038/s41598-020-74285-5 33051578 1 Otava haplotype St2 t4113.P0000593 t4113 MLP34 1 Others t4113.G007 St2_haplotype_genome Chr9 TGATTGGGGTACTGTTGGCT 7491747 7491766 AGTTGCTTTGAAGGCCTTGT 7492637 7492618 NA NA 0 0 166 NA NA 10.1038/s41598-020-74285-5 33051578 1 Otava haplotype St2 t4113.P0000594 t4113 WAT1 1 Others t4113.G007 St2_haplotype_genome NA CAGGACAAGCTAAGTTTTGG 0 0 GTTGGAATTGACATCTTTGC 0 0 NA NA 0 0 143 NA NA 10.1038/s41598-020-74285-5 33051578 1 Otava haplotype St2 t4113.P0000595 t4113 Unch865 1 Others t4113.G007 St2_haplotype_genome NA ACATGCCGAACCAACTTGTG 0 0 TCTCTGTCGTGAACCAACC 0 0 NA NA 0 0 222 NA NA 10.1038/s41598-020-74285-5 33051578 1 Otava haplotype St2 t4113.P0000596 t4113 SWEET12-like 1 Others t4113.G007 St2_haplotype_genome NA TGGAGACTAGAAGAAAGGCGT 0 0 TCTTCTTAGCTCCAGTGCCA 0 0 NA NA 0 0 153 NA NA 10.1038/s41598-020-74285-5 33051578 1 Otava haplotype St2 t4113.P0000597 t4113 UnCh838 1 Others t4113.G007 St2_haplotype_genome NA TCCTTTAGTCCAGTGGGCAG 0 0 GCCTAATATAACTGCCTTCCTCA 0 0 NA NA 0 0 168 NA NA 10.1038/s41598-020-74285-5 33051578 1 Otava haplotype St2 t4113.P0000598 t4113 GST 1 Others t4113.G007 St2_haplotype_genome Chr7 CCTATCCACAAGAAAATCCCTGT 47117794 47117816 GTCACCCCAGAACCTAGCTT 47117949 47117930 NA NA 0 0 156 NA NA 10.1038/s41598-020-74285-5 33051578 1 Otava haplotype St2 t4113.P0000599 t4113 PI-2 1 Others t4113.G007 St2_haplotype_genome Chr3 TATGCCCACGTTCAGAAGGA 44727940 44727959 CGGGGACACTTTGAATAGGC 44728123 44728104 NA NA 0 0 185 NA NA 10.1038/s41598-020-74285-5 33051578 1 Otava haplotype St2 t4113.P0000600 t4113 ECERIFERUM3-like 1 Others t4113.G007 St2_haplotype_genome Chr3 CCTTGACAGCTGCAGTGATC 51587653 51587672 TGCAATTTGTCACTTGAACCAG 51588035 51588014 NA NA 0 0 219 NA NA 10.1038/s41598-020-74285-5 33051578 1 Otava haplotype St2 t4113.P0000609 t4113 UnCh835 1 Others t4113.G007 St2_haplotype_genome Chr1 AGCACCATCGTCTCATTATC 10041037 10041056 AAATGACCAAGTGCACCTAC 10041213 10041194 NA NA 0 0 189 NA NA 10.1038/s41598-020-74285-5 33051578 1 Otava haplotype St2 t4113.P0000610 t4113 PGCRURSE5 1 Others t4113.G007 St2_haplotype_genome Chr1 ACTCAATTCCTCCTTCATCAG 83504826 83504846 TTGGAATGTGGTGCTGTACT 83505030 83505011 NA NA 0 0 205 NA NA 10.1038/s41598-020-74285-5 33051578 1 Otava haplotype St2 t4113.P0000611 t4113 9-DES 1 Others t4113.G007 St2_haplotype_genome Chr1 TCGCCCACCAGTACCTTTAC 88053014 88053033 CCAAATCTTTGCCTGGACAT 88053288 88053269 NA NA 0 0 275 NA NA 10.1038/s41598-020-74285-5 33051578 1 Otava haplotype St2 t4113.P0000612 t4113 AGPaseS-a1334 1 Others t4113.G007 St2_haplotype_genome NA TCATGATGGGAGCAGACTCCTACC 0 0 CTTTCCTATCTTTGCGTTCTTGT 0 0 NA NA 0 0 137 NA NA 10.1038/s41598-020-74285-5 33051578 1 Otava haplotype St2 t4113.P0000613 t4113 IRL 1 Others t4113.G007 St2_haplotype_genome Chr4 TTTTGAGATAGAGCCATCGT 68334525 68334544 CCCGTCTCTGATGACATAGT 68334730 68334711 NA NA 0 0 206 NA NA 10.1038/s41598-020-74285-5 33051578 1 Otava haplotype St2 t4113.P0000614 t4113 R1B-23 1 Others t4113.G007 St2_haplotype_genome NA GGCAAATGTCACAGTTAAGGC 0 0 TATTCCCCATTCCATCCGCG 0 0 NA NA 0 0 181 NA NA 10.1038/s41598-020-74285-5 33051578 1 Otava haplotype St2 t4113.P0000615 t4113 ANR 1 Others t4113.G007 St2_haplotype_genome Chr4 AACAAATGCACTAGCACACA 9999719 9999738 CTTGTTGGAGGAACAACACT 9999943 9999924 NA NA 0 0 225 NA NA 10.1038/s41598-020-74285-5 33051578 1 Otava haplotype St2 t4113.P0000616 t4113 Pat3-k1 1 Others t4113.G007 St2_haplotype_genome NA GGCACTAATTCAGAGTTTGC 0 0 CACAGAAGCATCATCAAATG 0 0 NA NA 0 0 228 NA NA 10.1038/s41598-020-74285-5 33051578 1 Otava haplotype St2 t4113.P0000617 t4113 MLP34 1 Others t4113.G007 St2_haplotype_genome Chr9 TGATTGGGGTACTGTTGGCT 7491747 7491766 AGTTGCTTTGAAGGCCTTGT 7492637 7492618 NA NA 0 0 166 NA NA 10.1038/s41598-020-74285-5 33051578 1 Otava haplotype St2 t4113.P0000618 t4113 WAT1 1 Others t4113.G007 St2_haplotype_genome NA CAGGACAAGCTAAGTTTTGG 0 0 GTTGGAATTGACATCTTTGC 0 0 NA NA 0 0 143 NA NA 10.1038/s41598-020-74285-5 33051578 1 Otava haplotype St2 t4113.P0000619 t4113 Unch865 1 Others t4113.G007 St2_haplotype_genome Chr8 ACATGCCGAACCAACTTGTG 44254119 44254138 TCTCTGTCGTGAACCCAACC 44254339 44254320 NA NA 0 0 223 NA NA 10.1038/s41598-020-74285-5 33051578 1 Otava haplotype St2 t4113.P0000620 t4113 StANANTHA 1 Others t4113.G007 St2_haplotype_genome Chr2 ATGGAAGCTTTTCATCATGCC 37760977 37760997 TCAGTTGAATGACTGAAAGGG 37762353 37762333 NA NA 0 0 NA NA NA 10.1093/jxb/erz484 31665396 1 Otava haplotype St2 t4113.P0000621 t4113 StWOX9 1 Others t4113.G007 St2_haplotype_genome Chr2 ATGGCTTCATCAAATAGACAC 32966376 32966396 TTATACATGATGAGTCGATGC 32968249 32968229 NA NA 0 0 NA NA NA 10.1093/jxb/erz484 31665396 1 Otava haplotype St2 t4113.P0000622 t4113 StLFY 1 Others t4113.G007 St2_haplotype_genome NA ATGGACCCAGATGCTTTCTC 0 0 TTAGAAATGCAGCAGGTGAT 0 0 NA NA 0 0 NA NA NA 10.1093/jxb/erz484 31665396 1 Otava haplotype St2 t4113.P0000623 t4113 StMC 1 Others t4113.G007 St2_haplotype_genome NA ATGGGAAGAGGAAAAGTTG 0 0 TCATAGATGTTTATTCATGTTG 0 0 NA NA 0 0 NA NA NA 10.1093/jxb/erz484 31665396 1 Otava haplotype St2 t4113.P0000624 t4113 StSOC1 1 Others t4113.G007 St2_haplotype_genome NA ATGGTGAGAGGGAAAACACAG 0 0 TCAAGACCACTCAGGACGC 0 0 NA NA 0 0 NA NA NA 10.1093/jxb/erz484 31665396 1 Otava haplotype St2 t4113.P0000625 t4113 StSOC1-like 1 Others t4113.G007 St2_haplotype_genome NA ATGGTGAGAGGGAAAACACAG 0 0 TTAGAGACGCCTTACTCTGC 0 0 NA NA 0 0 NA NA NA 10.1093/jxb/erz484 31665396 1 Otava haplotype St2 t4113.P0000626 t4113 StFD 1 Others t4113.G007 St2_haplotype_genome Chr2 ATGTGGTCATCAAGCAGGTC 39217323 39217342 TCAAAATGGAGCGGTTGACG 39218226 39218207 NA NA 0 0 NA NA NA 10.1093/jxb/erz484 31665396 1 Otava haplotype St2 t4113.P0000627 t4113 StFD-like 1 Others t4113.G007 St2_haplotype_genome Chr2 ATGTGGTCATCAAGTAATG 22281168 22281186 TCAAAATGGGGCCGTTGATG 22282048 22282029 NA NA 0 0 NA NA NA 10.1093/jxb/erz484 31665396 1 Otava haplotype St2 t4113.P0000638 t4113 KM822778 AY841130 AY841128 KM822780 1 Others t4113.G007 St2_haplotype_genome Chr10 GGAAGGACAGCTAACGATG 31959712 31959730 AGTGTTCTTTCAGCTTCTCC 31960049 31960030 NA NA 0 0 NA NA NA 10.1186/s12863-019-0728-x 30885125 1 Otava haplotype St2 t4113.P0000639 t4113 chr10:51745_200-51-749-200 1 Others t4113.G007 St2_haplotype_genome NA GTCACATCACTACACCACAT 0 0 TCCACTTCATCCCAATCAAAG 0 0 NA NA 0 0 NA NA NA 10.1186/s12863-019-0728-x 30885125 1 Otava haplotype St2 t4113.P0000640 t4113 AY841128 1 Others t4113.G007 St2_haplotype_genome NA ATGACTTCACATGTAATGATCAT 0 0 CTAATTAAGTAGATTCCATATATCA 0 0 NA NA 0 0 NA NA NA 10.1186/s12863-019-0728-x 30885125 1 Otava haplotype St2 t4113.P0000641 t4113 AY841128 1 Others t4113.G007 St2_haplotype_genome NA GGAGAAGGAAAGTGGCATCTTGTTCCA 0 0 TCCACTTCATCCCAATCAAAG 0 0 NA NA 0 0 NA NA NA 10.1186/s12863-019-0728-x 30885125 1 Otava haplotype St2 t4113.P0000642 t4113 AY841128 1 Others t4113.G007 St2_haplotype_genome Chr10 GAGAAGCTGAAAGAACACTACCT 31960031 31960053 CACCATCACCTTGTCCTTGT 31960147 31960128 NA NA 0 0 NA NA NA 10.1186/s12863-019-0728-x 30885125 1 Otava haplotype St2 t4113.P0000643 t4113 JQ219855 1 Others t4113.G007 St2_haplotype_genome NA GTGGTCACTTATTGCTGGTAGA 0 0 GGCGAGGAGGAGGAGTAATA 0 0 NA NA 0 0 NA NA NA 10.1186/s12863-019-0728-x 30885125 1 Otava haplotype St2 t4113.P0000644 t4113 KU242748 1 Others t4113.G007 St2_haplotype_genome NA CTAGGCAACAGATGGTCACTTAT 0 0 CTTCCTGTGTAGGTGTGTGTT 0 0 NA NA 0 0 NA NA NA 10.1186/s12863-019-0728-x 30885125 1 Otava haplotype St2 t4113.P0000645 t4113 JX848660 1 Others t4113.G007 St2_haplotype_genome Chr9 CCACCAAAGCCAGCTTTATC 51769559 51769578 ATCCGCTGGACAAATACCAG 51769669 51769650 NA NA 0 0 NA NA NA 10.1186/s12863-019-0728-x 30885125 1 Otava haplotype St2 t4113.P0000646 t4113 KP317176 1 Others t4113.G007 St2_haplotype_genome Chr8 CTGCAGAGCAGACATCTGATAA 53751268 53751289 GCAGCTTTCAGGTTCCATTTC 53751380 53751360 NA NA 0 0 NA NA NA 10.1186/s12863-019-0728-x 30885125 1 Otava haplotype St2 t4113.P0000647 t4113 JX848661 1 Others t4113.G007 St2_haplotype_genome NA ACCCTTAAGCCTGTTCCAAATC 0 0 CACCGGAAGAGGCAAGAATATC 0 0 NA NA 0 0 NA NA NA 10.1186/s12863-019-0728-x 30885125 1 Otava haplotype St2 t4113.P000102.1 t4113 MF18 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch01 TTGTCTAACTGAAGTACCAAAG 559419 559440 TGTGGTAGCGATTCTCAAAGG 560094 560074 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000103.1 t4113 MF19 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch01 GCTACTGGATTGGGATGATC 1651576 1651595 TAGTTCATTGTCATTGCAAACC 1651929 1651908 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000104.1 t4113 MF22 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch01 GTCCTCAGCTTATAAATTCAAC 58072131 58072152 CGACATCTTAATCATATAGATTC 58072704 58072682 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000105.1 t4113 TM23 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch01 TCAAGGTCAGAGAACAGATTGC 60730450 60730471 TTACTGGTTGGCTTCTTCCATT 60730851 60730830 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000106.1 t4113 TM24 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch01 TACTAACCAATTTTACTACATGAT 60731446 60731469 CATTGTTTGTTATTCTTGATCT 60732139 60732120 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000107.1 t4113 TM10 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch01 TGTAAACTTTCAAGAATAGACAG 73019320 73019342 GTACTTTTTGGGGATATCAAGA 73019805 73019784 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000108.1 t4113 MF21 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch01 TCCACCCTGAACCAACGCA 3698408 3698426 GTACAACTTATTATTATCCACAG 3698915 3698893 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000109.1 t4113 TM11 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch02 CACTCAAAGAATAAGCTGAATT 33876714 33876735 CGGATTCTTCCGTCTCCG 33877628 33877611 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000110.1 t4113 TM43 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch03 ATCAGGAAAGGCAGCAACAG 207366 207385 CGATAACTTCGCTTTCAAGTC 207665 207645 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000111.1 t4113 MF1 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch03 AAGAGCACAAGGCCAGGCAT 254350 254369 TATTGCTAGTATCACGAGAATA 254840 254819 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000112.1 t4113 TM13 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch03 CCACATTACAATAATCTTGTACTG 746294 746317 CATGGCTGCTTCATCCATGGC 747240 747220 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000113.1 t4113 MF2 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch03 CGTCAACTTTTCAAAGATCATC 1976908 1976929 CCCTTTACTTTCCTAATCGACT 1977292 1977271 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000114.1 t4113 MF3 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch03 AAGTACCAAGTTGGACTCATG 2574164 2574184 AGTTACTGATGATAATAGCTTG 2574513 2574492 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000115.1 t4113 MF6 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch03 AGGGTTTCACAAAGAGGGATT 44507396 44507416 GAATCAGAAGATTTTATAGATAAC 44507800 44507777 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000116.1 t4113 MF4 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch03 TGCGTGTGATCTCTTCTATCT 44501309 44501329 TCAAAGTTGTGTTTCCATTATCT 44501775 44501753 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000117.1 t4113 MF5 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch03 CAAGTACGTAGTAGCTTACAT 45734082 45734102 TCAGTACATACAGGGACAGA 45734401 45734382 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000118.1 t4113 TM12 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch03 GCTAATTTCATTTCTCCTTGCA 49838710 49838731 CTCAAGGATACATTAAGGTAGC 49840059 49840038 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000119.1 t4113 TM12b 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch03 GCTAATTTCATTTCTCCTTGC 49838710 49838730 CTCAAGGATACATTAAGGTAG 49840059 49840039 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000120.1 t4113 TM12c 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch03 CAGAGGTTGGCCAGTGATTT 49839498 49839517 CTCAAGGATACATTAAGGTAG 49840059 49840039 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000121.1 t4113 TM14 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch03 AGCACTATAAGCTCAAATTAAAT 34073899 34073921 AGCTCTGTAAGTCAACTTCTAC 34074546 34074525 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000122.1 t4113 TM15 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch03 AGTCATGCAGCGCAACCTTT 61796957 61796976 ATTTTTCCACAACTCTCCTTTA 61797544 61797523 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000123.1 t4113 TM20 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch04 CCATTGTCGACACAGACATCTT 2625525 2625546 AACACACCGGGATCTGTATGT 2626378 2626358 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000124.1 t4113 TM40 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch04 TACAATAATAAACATCCATATGG 9190201 9190223 AATAGACCACTATAATGGTGC 9191229 9191209 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000125.1 t4113 TM16 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch04 GTGTACTTGATGGACAATGGTAA 63549554 63549576 CCAATGAAGGCAATTGCTAAG 63550477 63550458 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000126.1 t4113 TM35 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch05 GATCGTAATGCTAAAATTTGAGT 5067838 5067860 GCTTATCGTCTTCACTACCAA 5068521 5068501 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000127.1 t4113 TM33 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch05 TGATGTTTCTTCCCTTGAAACT 47848170 47848191 CTTGGATTTGGACATGGACAT 47849113 47849093 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000128.1 t4113 TM34 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch05 ATTGCAATAATATGTTTGTAACATT 50876144 50876168 ACACAAATGACTGATATGGAATT 50876521 50876499 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000129.1 t4113 MF8 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch05 AAGGCAAATAATTGAAGTAGGT 1981114 1981135 CTCAAAGAAGCCATGTCCATT 1981669 1981649 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000130.1 t4113 MF9 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch05 GACATGATTTAGTGATGTATAG 2046112 2046133 GAGTTGAAACATCCAAAGTGC 2046497 2046477 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000131.1 t4113 MF7 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch05 AAGAAATGCACAGATACTGAAG 2134589 2134610 CTTGCTTACCCCTATGTTCC 2135305 2135286 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000132.1 t4113 MF12 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch06 CAGAGACAATTTCAAACAAGTG 49101573 49101594 GTACTTCGTTGCTCAATTTAAT 49102152 49102131 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000133.1 t4113 TM41 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch06 CTAGAATTGTCATTTCTCTACC 50409859 50409880 CTTGTTTATTGGTAAAGTGTGC 50410345 50410324 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000134.1 t4113 TM17 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch06 ACTGTAACGACGCAAGCCT 51580964 51580982 TTCCTGTCACATTGTGTTGCA 51581841 51581821 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000135.1 t4113 MF11 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch06 CCACTATTTTAAGTGCTATCAAG 54346464 54346486 CCCATAACTAACTTCTGGAAAA 54347092 54347071 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000136.1 t4113 TM18 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch06 CAGATAGATCAGCACCAGTTA 56859698 56859718 GATTCTCAGCTTCTGCTTCTG 56860110 56860090 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000137.1 t4113 MF10 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch06 CACTGTAATAATGGCTTTATTCT 50574351 50574373 AAGAAGGTCAAGACTTTCATC 50575325 50575305 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000138.1 t4113 TM21 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch07 TATTATTAAAGGAATTCCAAGATC 48948583 48948605 AGGTCCCTCCAGTTTAAGAG 48949498 48949479 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000139.1 t4113 MF14 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch07 AATTATATGAGTCTGCTTCACTT 53734538 53734560 CTTAGTGAAAATTGTGAGGTC 53735139 53735119 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000140.1 t4113 TM25 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch07 AACTATGTCTATATATGTGTAGTT 56364862 56364885 CGACTGAACTTAGAAGATTAAG 56365818 56365797 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000141.1 t4113 MF15 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch07 TCAAAAATGGCATCAGCTCTG 56067976 56067996 CCACATCAATTTCACATAAATCA 56068483 56068461 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000142.1 t4113 TM22 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch07 CAAACCTCCACACAACTCA 56067960 56067978 AGCTACTGCATTACAAACAAA 56068505 56068485 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000143.1 t4113 TM46 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch07 CATTCTTGAGCAATCTGTGAG 54329033 54329053 GTGCTCCATCAATTTCAGCAA 54329580 54329560 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000144.1 t4113 TM27 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch08 TTCTTCTCACTGTCACACC 46879159 46879177 GGTCTTAGGTCAAAATTGGAG 46880058 46880038 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000145.1 t4113 MF13 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch08 TGTCAAGCAGTGCAGTAAGG 48022040 48022059 TCAGTTGGTGTCTCATCCTTA 48022788 48022768 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000146.1 t4113 TM26 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch08 TAAGGTTTTGAACCAAGTTGTTA 48022055 48022077 TCCACTATTCAGTTGGTGTCT 48022796 48022776 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000147.1 t4113 TM47 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch08 ATGAACTCAAGTGTATTGGCTT 5482300 5482321 TCTCTGAGTTTGAAGAATTGTTA 5483147 5483125 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000148.1 t4113 TM28 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch09 GCTAATGCTACAGAGTCTCTA 50464834 50464854 CTACTTTGATAGTGTTAGCATAT 50466020 50465998 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000149.1 t4113 MF16 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch10 CCATCCATAACTAATACTACTG 38265411 38265432 CTAATAATACTTAATTAGTGGACA 38265918 38265895 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000150.1 t4113 TM29 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch10 ACAACTTTATCAGCCGAGGTA 59616944 59616964 AGCTCCAGGACATGATAAATG 59617455 59617435 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000151.1 t4113 TM30 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch10 ACTTCCAGTGGCAATAAACTC 56090969 56090989 ATTCATTCTCCAAGACGCTAC 56091509 56091489 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000152.1 t4113 TM3 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch11 GGTTCAAAACAATGGCATTAAC 41832046 41832067 TGCCGAGTTTTTCAGCTTCG 41832951 41832932 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000153.1 t4113 TM37 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch11 TGAAATCGATAGCGAAAGCAG 41833039 41833059 GAACAAGCAAGTATTTTGGGAT 41833778 41833757 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000154.1 t4113 TM38 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch11 AGGTGACAATTACCAAGGACT 41842860 41842880 GTAATGGTACTTTTGGTTTGTC 41843325 41843304 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000155.1 t4113 TM39 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch11 AACTAGGGGAATTAAGTGTTCT 41843457 41843478 TCCGTTCTAAAGGACAAGACA 41844052 41844032 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000156.1 t4113 MF17 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch11 GAAATTACTCAATCAAAAGGTTT 43823730 43823752 GCCTTTTCCCATCTATACATAA 43824564 43824543 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000157.1 t4113 TM32 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch12 TTGAAACGGACGGAATAAGTAA 609687 609708 TGTGGAGCTACAAGTCTGAAT 610214 610194 10.3389/fpls.2017.01040 28674545 1 DM_v4.03 t4113.P000158.1 t4113 TM31 1 Others t4113.G001 Stuberosum_448_v4.03 ST4.03ch12 CAAACTCCGATCCAAACGCA 54981348 54981367 GCTGTGCAGCAATATCTTCAA 54981943 54981923 10.3389/fpls.2017.01040 28674545 1 DM_v4.03