marker_id species_id marker_name sub_number marker_type mapped_genome_id reference_seq_name chr fwd_primer_seq fwd_primer_start_pos fwd_primer_end_pos rev_primer_seq rev_primer_start_pos rev_primer_end_pos target_seq target_chr target_start_pos target_end_pos allele enzyme comments doi pubmed f_active assembly_version t4113.M000001.1 t4113 Chy2 1 CAPS t4113.G002 SolTub_3.0 3 GAAAGTAAGGCACGTTGGCAAT 43937081 43937102 CCATAGACCAAGAGAAGGACC 43937388 43937368 NA 163 bp (142: C) [NA]; no 163-bp flagment (142: T) [NA] AluI 10.1007/s11103-010-9647-y 20490894 1 SolTub_3.0 t4113.M000005.1 t4113 CP16 1 CAPS t4113.G002 SolTub_3.0 8 TTAGGGACATACAAACAAACCTCA 16652528 16652551 CTTAAACGCGTCAAGTGAAACT 16652989 16652968 NA 460, about 350 (bp) [DW 83-3121]; 460 (bp) [DW 91-1187] HindIII 10.1007/s00122-002-0976-3 12582505 1 SolTub_3.0 t4113.M000035.1 t4113 GP186 1 CAPS t4113.G002 SolTub_3.0 5 AATCATAATCACGACTCATTGTCC 323861 323884 TTCTATTACTCATGAAGGCTCTCC 325399 325376 NA NA NA 10.1038/nature11912 23467094 1 SolTub_3.0 t4113.M000036.1 t4113 GP21 1 CAPS t4113.G002 SolTub_3.0 5 GGTTGGTGGCCTATTAGC 4037916 4037933 AGTGAGCCAGCATAGCATTACT 4039080 4039059 NA NA AseI 10.1038/nature11912 23467094 1 SolTub_3.0 t4113.M000037.1 t4113 GP179 1 CAPS t4113.G002 SolTub_3.0 5 TTTGCACTAAAATTTCAGACGAG 5947742 5947764 CATTTCAATGGTGTATCAAGTCAA 5948242 5948219 NA NA NA 10.1038/nature11912 23467094 1 SolTub_3.0 t4113.M000040.1 t4113 RH191I22 1 CAPS t4113.G002 SolTub_3.0 5 GTTGTTAAATTTAGGTTCTTGTTGCC 4439760 4439785 CGCACTCTGCAGGTGGGTATC 4441047 4441027 NA NA SacI 10.1038/nature11912 23467094 1 SolTub_3.0 t4113.M000045.1 t4113 SPUD237 1 CAPS t4113.G002 SolTub_3.0 5 AGCCAAGGAAAAGCTAGCATCCAAG 4943757 4943781 TTCCTGCTGATACTGACTAGAAAACC 4944150 4944125 NA NA AluI, HaeII 10.1038/nature11912 23467094 1 SolTub_3.0 t4113.M000046.1 t4113 RH105B16 1 CAPS t4113.G002 SolTub_3.0 5 GGCAGGAGACAACCGCAACT 4172586 4172605 AGGGGCTGACGCCTTCGTAT 4172950 4172931 NA NA EcoRI 10.1038/nature11912 23467094 1 SolTub_3.0 t4113.M000054.1 t4113 GP186 1 CAPS t4113.G002 SolTub_3.0 5 gcagctggatagtcaacgc 323833 323851 tccttacatccgcacttacg 325378 325359 NA NA TaqI 10.1007/s00122-007-0546-9 17468842 1 SolTub_3.0 t4113.M000056.1 t4113 Aco 1 CAPS t4113.G002 SolTub_3.0 7 catggctcctgaatatggtgca 46944969 46944990 atacaagtggtgcagccatagc 46946190 46946169 NA NA AluI 10.1007/s001220051645 NA 1 SolTub_3.0 t4113.M000086.1 t4113 GP38 1 CAPS t4113.G002 SolTub_3.0 11 TGGAACTTACTTCACTGACAAACT 39999704 39999727 TGCAGTAACTGAAAGCAACAGAT 40000528 40000506 NA NA RsaI 10.1007/s00122-013-2248-9 24343200 1 SolTub_3.0 t4113.M000091.1 t4113 1001T 1 CAPS t4113.G002 SolTub_3.0 11 GAGCTTTCTCAGCACGCTTT 43853005 43853024 TGCTGATGCTGTCCTTGAAC 43853292 43853273 NA NA MseI 10.1111/pbr.12075 NA 1 SolTub_3.0 t4113.M000093.1 t4113 cLEC-24-C3 1 CAPS t4113.G002 SolTub_3.0 11 AGATCGGCAAATGATCCAAG 40816546 40816565 ACTTGTGGCGAAAAATGAGG 40817817 40817800 NA NA TaqI 10.1007/s00122-013-2248-9 24343200 1 SolTub_3.0 t4113.M000094.1 t4113 C2_At5 g58490 1 CAPS t4113.G002 SolTub_3.0 11 TGGTGTTTTTCATCTTGCTTCTCC 44336952 44336975 ATACAATCAGCTGGCCAATTAGG 44337772 44337750 NA NA HpyCH4V 10.1111/pbr.12075 NA 1 SolTub_3.0 t4113.M000095.1 t4113 C2_At5g59960 1 CAPS t4113.G002 SolTub_3.0 11 ACGCCTTGTGTTTGTTTGGATGTC 45421848 45421871 TCCGATACTCATCAGCTCTTGTTC 45422597 45422574 NA NA Tsp509I 10.1111/pbr.12075 NA 1 SolTub_3.0 t4113.M000096.1 t4113 C2_At1g07960 1 CAPS t4113.G002 SolTub_3.0 11 AAGAGTTTGAATGTAGGGTATGAATG 42011936 42011961 ATGGTTTGTCAAATTTTGTGTTCC 42013641 42013618 NA NA HinfI 10.1007/s00122-013-2248-9 24343200 1 SolTub_3.0 t4113.M000097.1 t4113 C2_At1g56450 1 CAPS t4113.G002 SolTub_3.0 11 ACTCCCTCTTCTGTGATTTTTGCAATCTG 41057202 41057230 ACTTGTTCTTGGTGGAGTAAAAAATGG 41058250 41058224 NA NA EcoRI 10.1007/s00122-013-2248-9 24343200 1 SolTub_3.0 t4113.M000098.1 t4113 C2_At5g60540 1 CAPS t4113.G002 SolTub_3.0 11 AGTTAATTCGGGATGAAAAGCAG 41210151 41210173 TGCTGTTTTCATCCGTGCTCC 41211082 41211062 NA NA MspI 10.1007/s00122-013-2248-9 24343200 1 SolTub_3.0 t4113.M000099.1 t4113 C2_At5g60600 1 CAPS t4113.G002 SolTub_3.0 11 ACCAGGCAAGTGTGACGTCTTCTCTC 41713361 41713386 TTGCTTCAAGGTTGCAGAATGCG 41713574 41713552 NA NA HhaI 10.1007/s00122-013-2248-9 24343200 1 SolTub_3.0 t4113.M000102.1 t4113 123/XI 1 CAPS t4113.G002 SolTub_3.0 11 TCCCATAACGATCTCCCAAA 43969399 43969418 TTTGCTCCTTACCCATCACC 43971021 43971002 NA NA TaqI 10.1007/s00122-013-2248-9 24343200 1 SolTub_3.0 t4113.M000108.1 t4113 B11.6 1 CAPS t4113.G002 SolTub_3.0 11 GATTGGGCTGCTGCTGTGG 1314335 1314353 ATAGCTTCAGGTCGGGAGATTTGT 1316172 1316149 NA 1600 bp [ER (Gabi, Jasia, Maryna, Sante, Sleza, Sonda)]; absence of marker [ER (other 18 cultivars)]; 1600 bp [HR (Korona, Romula)]; absence of marker [HR (other 8 cultivare)]; absence of marker [S (16 cultivars)] EcoRI 10.1007/s11032-014-0024-4 24860254 1 SolTub_3.0 t4113.M000109.1 t4113 TG591 1 CAPS t4113.G002 SolTub_3.0 9 TCCAATCCGATGACCTCTG 59543812 59543830 AGCTGCAAATCTACTCGTG 59548095 59548077 NA 260 bp [NA]; 310 bp [NA] NA 10.1007/s11032-014-0024-4 24860254 1 SolTub_3.0 t4113.M000110.1 t4113 GP129 1 CAPS t4113.G002 SolTub_3.0 9 CGTTATCTGGACTCCTTTAG 53983361 53983380 GTGGTAGCAAAGTATTCATC 53983847 53983828 NA 500 bp [NA] NA 10.1007/s11032-014-0024-4 24860254 1 SolTub_3.0 t4113.M000111.1 t4113 U276927 1 CAPS t4113.G002 SolTub_3.0 9 GCATTAGCGCAATTGGAATCCC 51193205 51193226 GGAGAGCATTAGTACAGCGTC 51194494 51194474 NA 430 bp [NA] DdeI 10.1007/s11032-014-0024-4 24860254 1 SolTub_3.0 t4113.M000112.1 t4113 U38666 1 CAPS t4113.G002 SolTub_3.0 9 ACTCATGTTCACGCCACTTTCTTA 52926222 52926245 AGCTGCCGTGTCCTGTATCA 52926814 52926795 NA 550, 600 bp [NA] DdeI 10.1007/s11032-014-0024-4 24860254 1 SolTub_3.0 t4113.M000115.1 t4113 ShkB 1 CAPS t4113.G002 SolTub_3.0 11 GCTCACAGTTCTCCACAAAATC 2772802 2772823 CATCTTCTCCATAACCCTTTACC 2774003 2773981 NA 1000 bp [NA] NlaIII 10.1007/s11032-014-0024-4 24860254 1 SolTub_3.0 t4113.M019945.1 t4113 TG16 1 CAPS t4113.G002 SolTub_3.0 8 GTAATGGCCAGCAGGAAAAA 43334860 43334879 AATGCTTCCCACCTCTGTTG 43335279 43335260 NA NA RsaI 10.1007/s10681-015-1558-1 NA 1 SolTub_3.0 t4113.M019946.1 t4113 CT99 1 CAPS t4113.G002 SolTub_3.0 12 GAACCAAGGTAAACCACCACAAG 531091 531112 GCCGGAGACATTGCCGGAGCTA 532168 532148 NA NA RsaI 10.1007/s001220050543 NA 1 SolTub_3.0 t4113.M019947.1 t4113 GP34 1 CAPS t4113.G002 SolTub_3.0 12 GTTATCGTTGATTTCTCGTTCCG 1374587 1374608 CGTTGCTAGGTAAGCATGAAGAAG 1375436 1375413 NA NA TaqI 10.1007/s001220050543 NA 1 SolTub_3.0 t4113.M019948.1 t4113 AuxRP 1 CAPS t4113.G002 SolTub_3.0 6 AAGGCGGACGGAAAAGTAATCT 56330781 56330802 TTCAAGCAAGTCCATCAAACAAAT 56331440 56331417 NA NA HinfI 10.1007/s11032-015-0415-1 26612975 1 SolTub_3.0 t4113.M019951.1 t4113 IPM4 1 CAPS t4113.G002 SolTub_3.0 12 ACCACTGGCAAATGGCCATACGA 1731977 1731999 GTACTGGAGAGCTAGTAGTGATCA 1732794 1732771 NA not cleaved [Cara]; cleaved [Huinkel] TaqI 10.1007/s001220050543 NA 1 SolTub_3.0 t4113.M019953.1 t4113 IPM5 1 CAPS t4113.G002 SolTub_3.0 12 AGCTCCATTCGTGACGAT 1880534 1880551 AGCTTCGATAATTCTAAATTTG 1880997 1880978 NA not cleaved [Cara]; cleaved [Huinkel] DdeI 10.1007/s001220050543 NA 1 SolTub_3.0 t4113.M019954.1 t4113 CP60 1 CAPS t4113.G002 SolTub_3.0 12 CAGCCTACCGCGAAAGTGCCTTCG 644141 644164 GCCAACCCCACGAGTTTCTCACTGAC 645513 645488 NA NA DdeI 10.1007/s001220050543 NA 1 SolTub_3.0 t4113.M019961.1 t4113 TG105 1 CAPS t4113.G002 SolTub_3.0 11 TCACATGAGCTGGGAGAAAT 42986052 42986071 AAAGGCCTGTTGCTGAGAG 42986702 42986684 NA not cleaved [84-1031-29]; cleaved, 350 bp [J91-6164-21]; not cleaved [RH89-039-16 (RH, paternal clone)]; cleaved, 350 bp [Reaal]; cleaved, 350 bp [SH83-92-488 (SH, maternal clone)] HinfI 10.1094/MPMI.2004.17.4.428 15077675 1 SolTub_3.0 t4113.M019969.1 t4113 GP190 1 CAPS t4113.G002 SolTub_3.0 9 GGCAATCTGCAAAAAGGAAG 46019952 46019971 ACGTGATGGGGGATAGATTG 46020231 46020212 NA NA RsaI 10.1007/s00122-006-0224-3 16453130 1 SolTub_3.0 t4113.M019970.1 t4113 TG9 1 CAPS t4113.G002 SolTub_3.0 9 TGCCTAGACTCTGGGATTTATTTT 4814581 4814604 ACCTAGTTGTGTTTTCCAGTGTTG 4815057 4815035 NA NA HinfI 10.1007/s00122-006-0224-3 16453130 1 SolTub_3.0 t4113.M019974.1 t4113 GP250 1 CAPS t4113.G002 SolTub_3.0 11 GACATCAAGTTACCTATGAC 43420063 43420082 AGTTCAACACCAGTAGGAC 43420829 43420811 NA NA NA 10.1007/s00122-006-0224-3 16453130 1 SolTub_3.0 t4113.M019975.1 t4113 GP38 1 CAPS t4113.G002 SolTub_3.0 11 TGGAACTTACTTCACTGACAAACT 39999704 39999727 TGCAGTAACTGAAAGCAACAGAT 40000528 40000506 NA NA AluI 10.1007/s00122-006-0224-3 16453130 1 SolTub_3.0 t4113.M019976.1 t4113 Hsp90 1 CAPS t4113.G002 SolTub_3.0 6 ATTTACGATCAACTTCTCATTC 37879269 37879290 ACATTAATCTCCAACGCCAACA 37879922 37879901 NA NA NA 10.1007/s11032-015-0415-1 26612975 1 SolTub_3.0 t4113.M019977.1 t4113 Myb48g 1 CAPS t4113.G002 SolTub_3.0 6 TTGGAGAAATTGGATGAAGA 56315405 56315424 GGTTTGAAAAGAAGTGGAAA 56316106 56316087 NA NA TaqI 10.1007/s11032-015-0415-1 26612975 1 SolTub_3.0 t4113.M019978.1 t4113 Myb48d 1 CAPS t4113.G002 SolTub_3.0 6 TTGGAGAAATTGGATGAAGA 56315405 56315424 GGTTTGAAAAGAAGTGGAAA 56316106 56316087 NA NA TaqI 10.1007/s11032-015-0415-1 26612975 1 SolTub_3.0 t4113.M019979.1 t4113 Nod 1 CAPS t4113.G002 SolTub_3.0 6 ATGCTCATTTTTGTTTTTGC 56311132 56311151 AAGGCCAAATGTCATTACTA 56311673 56311654 NA NA HpaII 10.1007/s11032-015-0415-1 26612975 1 SolTub_3.0 t4113.M019980.1 t4113 Zfp 1 CAPS t4113.G002 SolTub_3.0 6 GGCAGTGGTATATCTGTCTG 51974820 51974839 TTGATGATGACAGGTGAGTG 51975413 51975394 NA NA TaqI 10.1007/s11032-015-0415-1 26612975 1 SolTub_3.0 t4113.M019981.1 t4113 Chaperone DnaJ 1 CAPS t4113.G002 SolTub_3.0 6 CAATCTCACCAATGCACATC 51954931 51954950 TTCTTAGCGATCCACAGAAG 51955715 51955696 NA NA MnlI 10.1007/s11032-015-0415-1 26612975 1 SolTub_3.0 t4113.M019983.1 t4113 pPt874a 1 CAPS t4113.G002 SolTub_3.0 6 ATACACTACACAGCAGCAAGAAAT 52047371 52047394 GCCCAACAATCAGCAGTAGAC 52047988 52047968 NA NA NA 10.1007/s11032-015-0415-1 26612975 1 SolTub_3.0 t4113.M019993.1 t4113 TG193 1 CAPS t4113.G002 SolTub_3.0 6 CCGCTATACCTCCCTGATGATA 58523139 58523160 GCCATTGGCATCAGATCCT 58523622 58523604 NA NA MspI 10.1007/s10681-015-1558-1 NA 1 SolTub_3.0 t4113.M019998.1 t4113 TG356 1 CAPS t4113.G002 SolTub_3.0 6 CCGCAAAATTAAGACACCAAA 47251621 47251641 AAAGCTTGCCTTGTCTGCAT 47251931 47251912 NA NA MseI 10.1007/s10681-015-1558-1 NA 1 SolTub_3.0 t4113.M019999.1 t4113 TG364 1 CAPS t4113.G002 SolTub_3.0 6 GATCCTGTAGGTCCACTTCCTG 52132909 52132930 ATGGCCATATGGAAAGTTGC 52133326 52133307 NA NA DdeI 10.1007/s10681-015-1558-1 NA 1 SolTub_3.0 t4113.M020014.1 t4113 SPUD237 1 CAPS t4113.G002 SolTub_3.0 5 AGCCAAGGAAAAGCTAGCATCCAAG 4943757 4943781 TTCCTGCTGATACTGACTAGAAAACC 4944150 4944125 NA NA AluI 10.1007/s001220050555 NA 1 SolTub_3.0 t4113.M020015.1 t4113 GP21 1 CAPS t4113.G002 SolTub_3.0 5 GGTTGGTGGCCTATTAGCCATGC 4037916 4037938 AGTGAGCCAGCATAGCATTACTTG 4039080 4039057 NA NA AluI 10.1007/s001220050555 NA 1 SolTub_3.0 t4113.M020016.1 t4113 GP82A 1 CAPS t4113.G002 SolTub_3.0 4 CCTTCTCTAGGTGATGTTTGCTGG 69626018 69626041 GCAGTTGCTCTCTCAAGTTCTGTC 69626388 69626365 NA NA NA NA NA 1 SolTub_3.0 t4113.M020036.1 t4113 GbssII 1 CAPS t4113.G002 SolTub_3.0 2 ttagaccatggagcgcattctg 46194969 46194990 gctgcaagtgctgatgaatcga 46196237 46196216 NA NA TaqI 10.1007/s001220051645 NA 1 SolTub_3.0 t4113.M020037.1 t4113 AGPaseS 1 CAPS t4113.G002 SolTub_3.0 1 gagcacatcttctatgtcctt 62147542 62147562 aagcctaatatctgcatgtca 62148873 62148853 NA NA NA 10.1007/s10681-012-0651-y NA 1 SolTub_3.0 t4113.M020039.1 t4113 SssIII 1 CAPS t4113.G002 SolTub_3.0 2 aacaaaagttcaggtcctctctc 36365707 36365729 aaatcccaccatcttctctctc 36367178 36367157 NA NA AluI 10.1007/s001220051645 NA 1 SolTub_3.0 t4113.M020041.1 t4113 Dpe-P 1 CAPS t4113.G002 SolTub_3.0 4 cactacttttcaatctcctatccc 53994141 53994164 gcatagtcacgaacttttttcc 53997200 53997179 NA NA TaqI 10.1007/s001220051645 NA 1 SolTub_3.0 t4113.M020042.1 t4113 Gb-R1 1 CAPS t4113.G002 SolTub_3.0 5 tccatcctgagactggagatac 9825813 9825834 acttgtactgcaggactggaag 9827672 9827651 NA NA RsaI 10.1007/s001220051645 NA 1 SolTub_3.0 t4113.M020043.1 t4113 Dbe 1 CAPS t4113.G002 SolTub_3.0 11 ctgatgtcagcatctatgagct 3945981 3946002 gatacgacaaggaccatttgca 3949056 3949035 NA NA TaqI 10.1007/s001220051645 NA 1 SolTub_3.0 t4113.M020044.1 t4113 Agl 1 CAPS t4113.G002 SolTub_3.0 4 gcagttgcgaataactgtggca 30721355 30721376 accaagctgtggttaaccagag 30722091 30722070 NA NA AluI 10.1007/s001220051645 NA 1 SolTub_3.0 t4113.M020045.1 t4113 StpH 1 CAPS t4113.G002 SolTub_3.0 00 gcacatcatatgcaagagcctg 18211380 18211401 gcatactatgctgctactgctg 18213355 18213334 NA NA RsaI 10.1007/s001220051645 NA 1 SolTub_3.0 t4113.M020046.1 t4113 Stp1 1 CAPS t4113.G002 SolTub_3.0 5 acacactatgttctgcttctcttc 349505 349528 actatcctccacctcaaccttc 350398 350377 NA NA TaqI 10.1007/s001220051645 NA 1 SolTub_3.0 t4113.M020049.1 t4113 Pfp-Alpha 1 CAPS t4113.G002 SolTub_3.0 4 ccctcaggcaacaggataacac 72024250 72024271 cggacaaaagatcagattagaacgac 72025864 72025839 NA NA AluI 10.1007/s001220051645 NA 1 SolTub_3.0 t4113.M020050.1 t4113 Pfp-Beta 1 CAPS t4113.G002 SolTub_3.0 2 acatcagcaatgtagtccgtaac 36837873 36837895 gtcatgatagatgctcgatcaac 36841171 36841149 NA NA RsaI 10.1007/s001220051645 NA 1 SolTub_3.0 t4113.M020054.1 t4113 Pain-1 1 CAPS t4113.G002 SolTub_3.0 3 gtcttcgataagacttttcgag 39255381 39255402 cagtggtcgggtctctaaagt 39257379 39257359 NA NA DdeI 10.1007/s001220051645 NA 1 SolTub_3.0 t4113.M020055.1 t4113 Sut1 1 CAPS t4113.G002 SolTub_3.0 11 cggactaaggttaaggctatgg 9055842 9055863 agcttccatagctgctggtgtt 9057172 9057151 NA NA RsaI 10.1007/s001220051645 NA 1 SolTub_3.0 t4113.M020056.1 t4113 Gpt 1 CAPS t4113.G002 SolTub_3.0 5 ggctcacacaattggtcatgtg 42301304 42301325 ccaagattgcaatagcagcacc 42302780 42302759 NA NA HaeIII 10.1007/s001220051645 NA 1 SolTub_3.0 t4113.M020058.1 t4113 Ant 1 CAPS t4113.G002 SolTub_3.0 11 tggagaggaaacactgcYaatgt 34617683 34617705 atgttRgcaccagcWcccttga 34618785 34618764 NA NA TaqI 10.1007/s001220051645 NA 1 SolTub_3.0 t4113.M020059.1 t4113 Pt1 1 CAPS t4113.G002 SolTub_3.0 9 tcagcagctgttaatggagtcg 56380376 56380397 tgcaacaccttggacatgtcgt 56380953 56380932 NA NA RsaI 10.1007/s001220051645 NA 1 SolTub_3.0 t4113.M020060.1 t4113 Pt2 1 CAPS t4113.G002 SolTub_3.0 3 cgccacgatcatgtctgaatac 627134 627155 taaacgccacggtgaaccagta 627789 627768 NA NA AluI 10.1007/s001220051645 NA 1 SolTub_3.0 t4113.M020061.1 t4113 Rca 1 CAPS t4113.G002 SolTub_3.0 10 acacYgtMaacaaccagatg 50947528 50947547 actctcttgacattctcttgc 50948123 50948103 NA NA TaqI 10.1007/s001220051645 NA 1 SolTub_3.0 t4113.M020065.1 t4113 Fk 1 CAPS t4113.G002 SolTub_3.0 6 agtggtgtcaacagtcttcacg 53750191 53750212 gctttggcgttcgtgactctac 53752545 53752524 NA NA TaqI 10.1007/s001220051645 NA 1 SolTub_3.0 t4113.M020067.1 t4113 Eno 1 CAPS t4113.G002 SolTub_3.0 9 cagcttcaatactctcggtcac 3943101 3943122 cttggtgcaaatgccatccttg 3945533 3945512 NA NA AluI 10.1007/s001220051645 NA 1 SolTub_3.0 t4113.M020069.1 t4113 G6pdh 1 CAPS t4113.G002 SolTub_3.0 2 tcttctattttgctcttcctcc 47731996 47732017 actcgtatttctgcctttcttg 47735167 47735146 NA NA DdeI 10.1007/s001220051645 NA 1 SolTub_3.0 t4113.M020070.1 t4113 Pdh-E1Alpha 1 CAPS t4113.G002 SolTub_3.0 5 tcaacaagccgagccattaac 6647294 6647314 gattagcagcaccatcaccatac 6647891 6647869 NA NA RsaI 10.1007/s001220051645 NA 1 SolTub_3.0 t4113.M020072.1 t4113 Icdh-1 1 CAPS t4113.G002 SolTub_3.0 1 aaaatatccccagacttgtccc 1117925 1117946 aacagcgtcaatgaactcttcc 1119891 1119870 NA NA AluI 10.1007/s001220051645 NA 1 SolTub_3.0 t4113.M020073.1 t4113 Mdh 1 CAPS t4113.G002 SolTub_3.0 8 gtcaagccgatgatcttgcagt 5807469 5807490 acagtggattgttcagacgtcc 5810290 5810269 NA NA AluI 10.1007/s001220051645 NA 1 SolTub_3.0 t4113.M020074.1 t4113 GMPase 1 CAPS t4113.G002 SolTub_3.0 3 ccctctccaatcttggcagatt 33495447 33495468 gaaactgaaccacttggcactg 33496116 33496095 NA NA AluI 10.1007/s001220051645 NA 1 SolTub_3.0 t4113.M020075.1 t4113 Ucp 1 CAPS t4113.G002 SolTub_3.0 9 acattccaagatcccaagcgtc 650842 650863 gtatcgtacctgggttacatcg 653690 653669 NA NA TaqI 10.1007/s001220051645 NA 1 SolTub_3.0 t4113.M020076.1 t4113 Pme 1 CAPS t4113.G002 SolTub_3.0 7 acttgctgaagcagttgctgca 54337526 54337547 ttagccacagtgaacggcatag 54338868 54338849 NA NA TaqI 10.1007/s001220051645 NA 1 SolTub_3.0 t4113.M020077.1 t4113 ShkB 1 CAPS t4113.G002 SolTub_3.0 11 gctcacagttctccacaaaatc 2772802 2772823 catcttctccataaccctttacc 2774003 2773981 NA NA RsaI 10.1007/s001220051645 NA 1 SolTub_3.0 t4113.M020079.1 t4113 Glu B 1 CAPS t4113.G002 SolTub_3.0 00 cagcctatcggagtatgctatg 23078359 23078380 cattgaatccacaagggcatcg 23079013 23078992 NA NA RsaI 10.1007/s001220051645 NA 1 SolTub_3.0 t4113.M020079.2 t4113 Glu B 2 CAPS t4113.G002 SolTub_3.0 1 cagcctatcggagtatgctatg 4726484 4726505 cattgaatccacaagggcatcg 4727109 4727088 NA NA RsaI 10.1007/s001220051645 NA 1 SolTub_3.0 t4113.M020080.1 t4113 Prk 1 CAPS t4113.G002 SolTub_3.0 2 ccatctgagtcaggaatcacct 47439386 47439407 acattgatcgagcactcgttgg 47441173 47441152 NA NA RsaI 10.1007/s001220051645 NA 1 SolTub_3.0 t4113.M020082.1 t4113 SSSIII 1 CAPS t4113.G002 SolTub_3.0 2 aacaaaagttcaggtcctctctc 36365707 36365729 aaatcccaccatcttctctctc 36367178 36367157 NA NA NA 10.1007/s10681-012-0651-y NA 1 SolTub_3.0 t4113.M020084.1 t4113 StChy2 1 CAPS t4113.G002 SolTub_3.0 3 gaaagtaaggcacgttggcaat 43937081 43937102 cgagatgggctcatagagcact 43937569 43937548 NA NA AluI 10.1007/s10681-012-0651-y NA 1 SolTub_3.0 t4113.M020089.1 t4113 AGPS2 1 CAPS t4113.G002 SolTub_3.0 7 gaaagcaaccatgtgaaat 21366461 21366479 acggaaaattttcatcttaac 21368927 21368907 NA NA AluI 10.1007/s10681-012-0651-y NA 1 SolTub_3.0 t4113.M020093.1 t4113 StPho2 1 CAPS t4113.G002 SolTub_3.0 00 gcacatcatatgcaagagcctg 18211380 18211401 gcatactatgctgctactgctg 18213355 18213334 NA NA HphI 10.1007/s10681-012-0651-y NA 1 SolTub_3.0 t4113.M020098.1 t4113 StLin8 1 CAPS t4113.G002 SolTub_3.0 10 attaattgtcgctgacgtt 55841306 55841324 atggtccatgcattcaat 55842958 55842941 NA NA DdeI 10.1007/s10681-012-0651-y NA 1 SolTub_3.0 t4113.M020103.1 t4113 RGH-CAPS1 1 CAPS t4113.G002 SolTub_3.0 9 TTGTACGAGCCATTGACACC 49616407 49616426 CAAGGAACTGCTAGCAAACG 49617812 49617793 NA NA HpyCH4IV 10.1007/s00122-011-1602-z 21590328 1 SolTub_3.0 t4113.M020155.1 t4113 RGH-CAPS3 1 CAPS t4113.G002 SolTub_3.0 7 AGGACTTATGTGCCAGTTGG 35391893 35391912 CCGTCATTCTAACTTGACGC 35393464 35393445 NA NA AluI 10.1007/s00122-011-1602-z 21590328 1 SolTub_3.0 t4113.M020156.1 t4113 RGH-CAPS4 1 CAPS t4113.G002 SolTub_3.0 11 AAGCCATGTCTTTCCTCTGG 42317587 42317606 GCGTGTGACAAGTGTTAATGG 42318997 42318977 NA NA RsaI 10.1007/s00122-011-1602-z 21590328 1 SolTub_3.0 t4113.M020158.1 t4113 RGH-CAPS6 1 CAPS t4113.G002 SolTub_3.0 1 GATCCACTGCGGTATTTTGG 78144646 78144665 TGGGTAAAGGGATTGCTACG 78146024 78146005 NA NA AluI 10.1007/s00122-011-1602-z 21590328 1 SolTub_3.0 t4113.M020160.1 t4113 RGH-CAPS8 1 CAPS t4113.G002 SolTub_3.0 11 ATGTGCAATTCCACAGTACC 37122668 37122687 GACTAACAGACCATGAGTGG 37124074 37124055 NA NA NA 10.1007/s00122-011-1602-z 21590328 1 SolTub_3.0 t4113.M020161.1 t4113 RGH-CAPS9 1 CAPS t4113.G002 SolTub_3.0 12 AAGTCTCAAGTGATGTTGGG 59488062 59488081 GACATCAATGGAAACTTGGG 59489553 59489534 NA NA NA 10.1007/s00122-011-1602-z 21590328 1 SolTub_3.0 t4113.M020162.1 t4113 RGH-CAPS10 1 CAPS t4113.G002 SolTub_3.0 00 GGTACCTTGCAGCTCTTTGC 20844704 20844723 TGACGGGTACCATACACTGG 20846109 20846090 NA NA HpaII 10.1007/s00122-011-1602-z 21590328 1 SolTub_3.0 t4113.M020163.1 t4113 RGH-CAPS11 1 CAPS t4113.G002 SolTub_3.0 3 GTGTGTCCTTCCAAACATGC 51324166 51324185 GAGTGGTAGTAGTCTACACC 51325633 51325614 NA NA AluI 10.1007/s00122-011-1602-z 21590328 1 SolTub_3.0 t4113.M020164.1 t4113 RGH-CAPS12 1 CAPS t4113.G002 SolTub_3.0 1 AAATCAAGTCAACACCCTGC 15026830 15026849 TTGTCAGTAGAGAAGCATCC 15028139 15028120 NA NA HaeIII 10.1007/s00122-011-1602-z 21590328 1 SolTub_3.0 t4113.M020171.1 t4113 GP501 1 CAPS t4113.G002 SolTub_3.0 1 GAACCAACGATTGACTATGG 6142619 6142638 GGAAACAAAAGCTCAATGGC 6143249 6143230 NA NA TaqI 10.1007/s00122-011-1602-z 21590328 1 SolTub_3.0 t4113.M020173.1 t4113 TG21F 1 CAPS t4113.G002 SolTub_3.0 1 CTTTTGTTGGAATGGAAAGG 62729271 62729290 CATGAAGCAAAGGAAGAGGC 62729848 62729829 NA NA NlaIII 10.1007/s00122-011-1602-z 21590328 1 SolTub_3.0 t4113.M020174.1 t4113 GP26 1 CAPS t4113.G002 SolTub_3.0 2 ACTGTGATGTAAGAGTACCC 32695035 32695054 CTGCAGGTTAATGTAGTTAG 32695906 32695887 NA NA DpnII 10.1007/s00122-011-1602-z 21590328 1 SolTub_3.0 t4113.M020175.1 t4113 TG33F 1 CAPS t4113.G002 SolTub_3.0 2 GATGTCTAGTTCATGTCAGC 13981837 13981856 AGGTACCTCAACCAGATGAG 13982353 13982334 NA NA HpaII 10.1007/s00122-011-1602-z 21590328 1 SolTub_3.0 t4113.M020176.1 t4113 TG244 1 CAPS t4113.G002 SolTub_3.0 3 CTTGACACACTCAAATGTCC 62044762 62044781 ATCAGGACTCAAGAAGTTGG 62045492 62045473 NA NA HhaI 10.1007/s00122-011-1602-z 21590328 1 SolTub_3.0 t4113.M020177.1 t4113 GP80 1 CAPS t4113.G002 SolTub_3.0 3 TCCTGAAGTGGTTCATCACG 46505392 46505411 TGTTGGGAGAAGAAGAGAGC 46506807 46506788 NA NA HaeIII 10.1007/s00122-011-1602-z 21590328 1 SolTub_3.0 t4113.M020178.1 t4113 GP517 1 CAPS t4113.G002 SolTub_3.0 3 GGAAACAAAGGTTCTGCTGG 52305378 52305397 ATTTAGCCGTTGTATCGTGC 52306087 52306068 NA NA HpyCH4IV 10.1007/s00122-011-1602-z 21590328 1 SolTub_3.0 t4113.M020179.1 t4113 GP510 1 CAPS t4113.G002 SolTub_3.0 3 GCACCTGGTTTAAGCTTTGC 4255422 4255441 GTATGCATTCTGGAACAAGC 4255958 4255939 NA NA ApoI 10.1007/s00122-011-1602-z 21590328 1 SolTub_3.0 t4113.M020180.1 t4113 GP180 1 CAPS t4113.G002 SolTub_3.0 4 TCAAACTCCTTCACAAAGCA 963955 963974 TCCACCCCTGGATTCAAGAA 964388 964369 NA NA AluI 10.1007/s00122-011-1602-z 21590328 1 SolTub_3.0 t4113.M020182.1 t4113 21BA 1 CAPS t4113.G002 SolTub_3.0 10 GTGATTATGTCATCCAAAAGTTTATAG 51749621 51749647 GAATTTCTGAGGTTGAGGTCTTA 51750062 51750040 NA NA NA 10.1007/s00122-009-1024-3 19363602 1 SolTub_3.0 t4113.M020183.1 t4113 GP221 1 CAPS t4113.G002 SolTub_3.0 4 TCGTTTGGTGACTGAACAGG 28827647 28827666 CTGCAGCACTAAAGACAGTAC 28828143 28828123 NA NA AluI 10.1007/s00122-011-1602-z 21590328 1 SolTub_3.0 t4113.M020184.1 t4113 TG339R 1 CAPS t4113.G002 SolTub_3.0 4 ATCCTTGTAGGACTCCTCTC 8015365 8015384 ACTCTTTCGGCCTACAAGTC 8015944 8015925 NA NA DpnII 10.1007/s00122-011-1602-z 21590328 1 SolTub_3.0 t4113.M020185.1 t4113 GP511 1 CAPS t4113.G002 SolTub_3.0 4 TCGTCTGCAAGAATACTAGAC 2207325 2207343 CCAACCTTTGATGGTTTCTGC 2208023 2208003 NA NA HpaII 10.1007/s00122-011-1602-z 21590328 1 SolTub_3.0 t4113.M020186.1 t4113 SPUD237 1 CAPS t4113.G002 SolTub_3.0 5 AGCCAAGGAAAAGCTAGCATCCAAG 4943757 4943781 TTCCTGCTGATACTGACTAGAAAACC 4944150 4944125 NA NA HaeIII 10.1007/s00122-011-1602-z 21590328 1 SolTub_3.0 t4113.M020187.1 t4113 BA13I2 1 CAPS t4113.G002 SolTub_3.0 5 CAAGCTTCTGGATTAAGGAGG 5929819 5929838 ATATGGTCAGGTTGTCCAGG 5930315 5930296 NA NA NA CAAGCTTC TGGATTAAGG AGG 10.1007/s00122-011-1602-z 21590328 1 SolTub_3.0 t4113.M020188.1 t4113 T1198 1 CAPS t4113.G002 SolTub_3.0 6 AGCAGCAAACTTACGGTAGC 2567048 2567067 ATCACTGTGCATTATCACCC 2569619 2569600 NA NA HhaI 10.1007/s00122-011-1602-z 21590328 1 SolTub_3.0 t4113.M020190.1 t4113 Sus3 1 CAPS t4113.G002 SolTub_3.0 7 GCAAAGTAAATCTTATACATGTGACC 40643437 40643462 CATGACAAGGAAAGCATGACCCC 40644639 40644617 NA NA TaqI 10.1007/s00122-011-1602-z 21590328 1 SolTub_3.0 t4113.M020191.1 t4113 T1257 1 CAPS t4113.G002 SolTub_3.0 7 ATGGAATTGGATCTGGATCG 53678798 53678817 GCATGACGCATAAGGATAGC 53680651 53680632 NA NA HhaI 10.1007/s00122-011-1602-z 21590328 1 SolTub_3.0 t4113.M020192.1 t4113 CT148 1 CAPS t4113.G002 SolTub_3.0 8 GACAGGCCACTGAAGTTTGC 53500309 53500328 ATTCCAGCTGCTGCTTTTGC 53502203 53502184 NA NA DdeI 10.1007/s00122-011-1602-z 21590328 1 SolTub_3.0 t4113.M020193.1 t4113 CT183R 1 CAPS t4113.G002 SolTub_3.0 8 GCAAGATCTTCACGTGCTTC 1357131 1357150 CAACTGTACTGGTCTTCAGG 1358105 1358088 NA NA MseI 10.1007/s00122-011-1602-z 21590328 1 SolTub_3.0 t4113.M020194.1 t4113 TG415F 1 CAPS t4113.G002 SolTub_3.0 9 ATCAGGATCCAATGGGAAGC 31037899 31037918 GCAGCTTTAGTTTTGTCAGC 31038476 31038457 NA NA DpnII 10.1007/s00122-011-1602-z 21590328 1 SolTub_3.0 t4113.M020195.1 t4113 GP101 1 CAPS t4113.G002 SolTub_3.0 9 GCTTAACATGCAAAGGTTAAA 57537467 57537487 GGCATTTCTATGGTATCAGAG 57538214 57538194 NA NA NlaIII 10.1007/s00122-011-1602-z 21590328 1 SolTub_3.0 t4113.M020196.1 t4113 T0521 1 CAPS t4113.G002 SolTub_3.0 9 GCATTACCTAGATCAATGCC 60436546 60436565 CAGTCGGCGCAGTTTCAAAA 60438284 60438265 NA NA AluI 10.1007/s00122-011-1602-z 21590328 1 SolTub_3.0 t4113.M020197.1 t4113 GP97 1 CAPS t4113.G002 SolTub_3.0 9 ACAAAAGACTACAGAGCACC 2204232 2204250 CATCTACAGCACCAGGTACC 2204933 2204914 NA NA NA 10.1007/s00122-011-1602-z 21590328 1 SolTub_3.0 t4113.M020198.1 t4113 TG303 1 CAPS t4113.G002 SolTub_3.0 10 GTAAAGGGTTGTTCTTGTGC 2481180 2481197 TGGGGTTCATCACAGATTCC 2481561 2481542 NA NA AluI 10.1007/s00122-011-1602-z 21590328 1 SolTub_3.0 t4113.M020199.1 t4113 ADG2 1 CAPS t4113.G002 SolTub_3.0 11 ATACACTCATCTAAATTTGATGG 1826029 1826051 ACTTAACTGCATCATGTTCAAG 1826380 1826359 NA NA HpaII 10.1007/s00122-011-1602-z 21590328 1 SolTub_3.0 t4113.M020203.1 t4113 GP81 1 CAPS t4113.G002 SolTub_3.0 12 CGTTTCCTACAATTGGAAGC 53280795 53280812 CAGGATAGAGAGACTAATGC 53281236 53281217 NA NA TaqI 10.1007/s00122-011-1602-z 21590328 1 SolTub_3.0 t4113.M020252.1 t4113 ans 1 CAPS t4113.G002 SolTub_3.0 8 CTTGGCATATTCACTTGTTGCT 53731338 53731359 TATTGCTTGTACTTCTATTTTTCGAGATAG 53732148 53732121 NA NA HaeIII 10.1007/s00122-009-1024-3 19363602 1 SolTub_3.0 t4113.M020253.1 t4113 bch6 1 CAPS t4113.G002 SolTub_3.0 6 CAAATGTACCCAACATTTCGGTTA 37868925 37868948 AACAACCTCACATGTTTCTCCAA 37869363 37869341 NA NA NA 10.1007/s00122-009-1024-3 19363602 1 SolTub_3.0 t4113.M020254.1 t4113 chi 1 CAPS t4113.G002 SolTub_3.0 5 ACTACACTTTGCTGCAGGGGA 1401031 1401051 ATAGAGGTTTGGAGATTGAAGG 1401838 1401817 NA NA MseI 10.1007/s00122-009-1024-3 19363602 1 SolTub_3.0 t4113.M020255.1 t4113 chs 1 CAPS t4113.G002 SolTub_3.0 5 GCGACTCCTTCGAACTGTG 48887142 48887160 TGAAGTTTTTCGGGCTTTAGGC 48888370 48888350 NA NA AluI 10.1007/s00122-009-1024-3 19363602 1 SolTub_3.0 t4113.M020261.1 t4113 zep 1 CAPS t4113.G002 SolTub_3.0 2 AGAGGGATTTAAGTGCTATCAGAG 43805052 43805075 CCAGTATAACAAGTGTAGCCAGAG 43806267 43806244 NA NA BfuCI 10.1007/s00122-009-1024-3 19363602 1 SolTub_3.0 t4113.M020297.1 t4113 GP79 1 CAPS t4113.G002 SolTub_3.0 6 cctttacttgtaattatgcatc 1909752 1909773 gtctttagggatatggattac 1911078 1911058 NA NA NA 10.1007/s00122-008-0746-y 18379755 1 SolTub_3.0 t4113.M020331.1 t4113 GP78 1 CAPS t4113.G002 SolTub_3.0 5 caggaggctcaaaactttca 46828796 46828815 gcatatcaccaacgattgct 46829845 46829826 NA NA TaqI 10.1007/s00122-007-0546-9 17468842 1 SolTub_3.0 t4113.M020333.1 t4113 GP219 1 CAPS t4113.G002 SolTub_3.0 7 tgaatgactgagaactattgag 54257461 54257482 tgcctggttcactaagagctg 54259192 54259172 NA NA RsaI 10.1007/s00122-007-0546-9 17468842 1 SolTub_3.0 t4113.M020438.1 t4113 TG432 1 CAPS t4113.G002 SolTub_3.0 5 GTACTCCTGCTTGAGCCATT 4789261 4789280 GGACAGTCATCAGATTGTGG 4791588 4791569 NA NA RsaI 10.1007/s00122-009-1026-1 19363662 1 SolTub_3.0 t4113.M020440.1 t4113 GP179 1 CAPS t4113.G002 SolTub_3.0 5 AATTTCAGACGAGTAGGCACT 5947752 5947772 GGTTTTAGTGATTGTGCTGC 5948294 5948275 NA NA RsaI 10.1007/s00122-009-1026-1 19363662 1 SolTub_3.0 t4113.M020441.1 t4113 Stan2-Alu I 1 CAPS t4113.G002 SolTub_3.0 10 GTAATAAGGAAAGGTTCATGGACT 51749251 51749274 GAATTTCTGAGGTTGAGGTCTTA 51750062 51750040 NA 219+186 / 219+132+52+44 [07506-01 (diploid)]; 132+119+100+52+44 / 219+132+52+44 [W5281.2 (diploid)] AluI Stan2-F4 (GTAATAAGGAAAGGTTCATGGACT) Stan2-ClaI-R1 (GAATTTCTGAGGTTGAGGTCTTA) 10.1007/s00122-009-1158-3 19779693 1 SolTub_3.0 t4113.M020442.1 t4113 Stan2-ClaI 1 CAPS t4113.G002 SolTub_3.0 10 GTGATTATGTCATCCAAAAGTTTATAG 51749621 51749647 GAATTTCTGAGGTTGAGGTCTTA 51750062 51750040 NA - [07506-01 (diploid)]; 441 (Stan2_777 allele) [W5281.2 (diploid)] ClaI Stan2-ClaI-F2 (GTGATTATGTCATCCAAAAGTTTATAG) Stan2-ClaI-R1 (GAATTTCTGAGGTTGAGGTCTTA) 10.1007/s00122-009-1158-3 19779693 1 SolTub_3.0 t4113.M020444.1 t4113 Ba213c14 1 CAPS t4113.G002 SolTub_3.0 5 GGCTGGAAGAGCTTGCAAG 5485337 5485354 TTAACAAGAACGCCGAAGAC 5485770 5485751 NA NA NlaIII 10.1007/s00122-009-1026-1 19363662 1 SolTub_3.0 t4113.M020445.1 t4113 Ba87d17 1 CAPS t4113.G002 SolTub_3.0 5 TCAATCGCCTTACTTCCCTG 5469765 5469784 CCAGCCACAACTAGAACATG 5470098 5470079 NA NA DraI 10.1007/s00122-009-1026-1 19363662 1 SolTub_3.0 t4113.M020448.1 t4113 Ba43a11 1 CAPS t4113.G002 SolTub_3.0 5 GGATCAACTGATCACAAGGG 5366020 5366039 CTGGAGCACAAGTTCTATCG 5366612 5366594 NA NA NlaIII 10.1007/s00122-009-1026-1 19363662 1 SolTub_3.0 t4113.M020450.1 t4113 SD4 1 CAPS t4113.G002 SolTub_3.0 5 GTCCTCTAGTGTAGGTATGG 5031391 5031410 AAGACCGGGCACAGGGAG 5032266 5032249 NA + [AM (diploid clone 3778-16)] NlaIII 10.1007/s00122-009-1026-1 19363662 1 SolTub_3.0 t4113.P0000168 t4113 SpGot2-1 1 CAPS t4113.G001 DM_v4.03 NA AAGCGCTTTTGTCCTGATTC 0 0 TTCCCCGAGCCATAGAGTT 0 0 NA NA 0 0 NA NA 10.3389/fpls.2017.01729 29085380 1 DM_v4.03 t4113.P0000169 t4113 SpGro1 1 CAPS t4113.G001 DM_v4.03 NA GAGTTGAGGTGGCTTGATTGG 0 0 CAACATTGGATATTTGGTTAGTTGA 0 0 NA NA 0 0 NA NA 10.3389/fpls.2017.01729 29085380 1 DM_v4.03 t4113.P0000170 t4113 SpCT226 1 CAPS t4113.G001 DM_v4.03 ST4.03ch07 AGCAGAGGAGCACCATACT 50611235 50611253 GGCATATTACTTGAATCCAATA 50611940 50611919 NA NA 0 0 NA NA Blast_hit_num.:10 10.3389/fpls.2017.01729 29085380 1 DM_v4.03 t4113.P0000171 t4113 SpT1756 1 CAPS t4113.G001 DM_v4.03 NA GTTGATGCCTGTGTCGTCGTT 0 0 TAATGCGTCCTTCTTCGTCAATCT 0 0 NA NA 0 0 NA NA 10.3389/fpls.2017.01729 29085380 1 DM_v4.03 t4113.P0000172 t4113 SpAFLP2 1 CAPS t4113.G001 DM_v4.03 ST4.03ch07 CAACAAATAGGCATGTGAAGAAC 51368412 51368433 GACCCCACCAACCCAAAAAGAC 51368805 51368784 NA NA 0 0 NA NA 10.3389/fpls.2017.01729 29085380 1 DM_v4.03 t4113.P0000174 t4113 SpAFLP1 1 CAPS t4113.G001 DM_v4.03 NA TCAGAGGACACGAGATTACG 0 0 ATACCATCCTCATTTTCT TTGTTA 0 0 NA NA 0 0 NA NA 10.3389/fpls.2017.01729 29085380 1 DM_v4.03 t4113.P0000175 t4113 SpAL21 1 CAPS t4113.G001 DM_v4.03 NA TTTTTGGGCTTGTCCTCTGC 0 0 GATCCCCTTCTGCGTGGT 0 0 NA NA 0 0 NA NA 10.3389/fpls.2017.01729 29085380 1 DM_v4.03 t4113.P0000176 t4113 SpGP127 1 CAPS t4113.G001 DM_v4.03 ST4.03ch07 GGTGATCGACTGGAACGTCT 53031730 53031749 CTGCAGATTCCTCGCATACT 53032495 53032476 NA NA 0 0 NA NA 10.3389/fpls.2017.01729 29085380 1 DM_v4.03 t4113.P0000177 t4113 SpTG20 1 CAPS t4113.G001 DM_v4.03 ST4.03ch02 TCTTTGTGGGGTTTTGGAGTTTTT 38374365 38374388 GAGTGGCATGGTGTGGCAGTTCT 38376068 38376046 NA NA 0 0 NA NA 10.3389/fpls.2017.01729 29085380 1 DM_v4.03 t4113.P0000250 t4113 336-CAPS 1 CAPS t4113.G007 St2_haplotype_genome Chr10 TTGAACACGTAGTCCACTGCCACT 29311376 29311399 TTATGCGCTACTCGCGGGTAAACT 29312317 29312294 NA NA 0 0 900 SspI NA 10.3390/ijms23031470 35163389 1 Otava haplotype St2 t4113.P0000251 t4113 1137-CAPS 1 CAPS t4113.G007 St2_haplotype_genome Chr4 ATGGTTGACACCCTCTCCATGTGT 70796775 70796798 AGTGGCCAGTAAATGGCTCCCATA 70797682 70797659 NA NA 0 0 908 PvuII NA 10.3390/ijms23031470 35163389 1 Otava haplotype St2 t4113.P0000252 t4113 1137-CAPSIII 1 CAPS t4113.G007 St2_haplotype_genome Chr4 GGCGTTCATATGGAACACTAGGTC 71008876 71008899 GATCCTACCAGTACACTGTGGTTG 71009860 71009837 NA NA 0 0 928 BsaBI NA 10.3390/ijms23031470 35163389 1 Otava haplotype St2 t4113.P0000253 t4113 1137-CAPSIV 1 CAPS t4113.G007 St2_haplotype_genome Chr4 CAAACCCAAGACCTCCTTATC 71005927 71005947 ACCAACAAACTCCAGTCTTC 71006654 71006635 NA NA 0 0 727 FokI NA 10.3390/ijms23031470 35163389 1 Otava haplotype St2 t4113.P0000254 t4113 1137-CAPS 1 CAPS t4113.G007 St2_haplotype_genome Chr4 GTGTCTCCTGTGAGAGATTTG 71003536 71003556 TATAGATTGGAATGCGAGAACC 71004340 71004319 NA NA 0 0 806 AflII NA 10.3390/ijms23031470 35163389 1 Otava haplotype St2 t4113.P0000255 t4113 1874-CAPS 1 CAPS t4113.G007 St2_haplotype_genome Chr10 GGCAAAGAGCAGTTGGTTCCCATT 29956652 29956675 TCGTAATTGGTGGCATCACGAGGA 29957495 29957472 NA NA 0 0 833 BstYI NA 10.3390/ijms23031470 35163389 1 Otava haplotype St2 t4113.P0000256 t4113 1137CAPS 1 CAPS t4113.G007 St2_haplotype_genome Chr4 AGTTCTCATGGTGGGCCTTTCAGA 71003255 71003278 TATGTAGCCTGAGCTGTGTTGCCT 71004236 71004213 NA NA 0 0 773 AflII NA 10.3390/ijms23031470 35163389 1 Otava haplotype St2 t4113.P0000257 t4113 8-CAPS 1 CAPS t4113.G007 St2_haplotype_genome Chr10 TCAAGGTCGACGCAACTCAAGTCT 36848838 36848861 ACCAAGCTAGCTGGAACTTTCGGA 36849675 36849652 NA NA 0 0 800 SpeI NA 10.3390/ijms23031470 35163389 1 Otava haplotype St2 t4113.P0000296 t4113 C237-I 1 CAPS t4113.G007 St2_haplotype_genome NA GCAGTCCTAATTGCACGTAACA 0 0 CGATCAATACCATATGGTCA 0 0 NA NA 0 0 138 NA NA 10.1270/jsbbs.20134 34776742 1 Otava haplotype St2 t4113.P0000601 t4113 UnCh835 1 CAPS t4113.G007 St2_haplotype_genome NA GGTACGAGAGGCGAATTGAA 0 0 ATCCAGCCAAAGTCACAAGG 0 0 NA NA 0 0 1000 HpaII NA 10.1038/s41598-020-74285-5 33051578 1 Otava haplotype St2 t4113.P0000602 t4113 PGCRURSE5 1 CAPS t4113.G007 St2_haplotype_genome Chr1 TCACAATTGGACATACAAATTACAAGTACTA 83490138 83490166 AATATCGATGGATTTGATATTGTCATC 83491731 83491705 NA NA 0 0 1587 HpaII NA 10.1038/s41598-020-74285-5 33051578 1 Otava haplotype St2 t4113.P0000603 t4113 9-DES 1 CAPS t4113.G007 St2_haplotype_genome Chr1 CAAAATCAACATGGCACCAG 88052057 88052076 TCCCCACGAGAAAAAGAATG 88052733 88052714 NA NA 0 0 677 TaiI NA 10.1038/s41598-020-74285-5 33051578 1 Otava haplotype St2 t4113.P0000604 t4113 IRL 1 CAPS t4113.G007 St2_haplotype_genome Chr4 GGAAGAATATGCTGCTTCAC 68335848 68335867 ATCTTGCTTCTTCCAAATCA 68336405 68336386 NA NA 0 0 554 DpnII NA 10.1038/s41598-020-74285-5 33051578 1 Otava haplotype St2 t4113.P0000606 t4113 ANR 1 CAPS t4113.G007 St2_haplotype_genome Chr4 AACAAATGCACTAGCACACA 9999719 9999738 CTTGTTGGAGGAACAACACT 9999943 9999924 NA NA 0 0 225 XapI NA 10.1038/s41598-020-74285-5 33051578 1 Otava haplotype St2 t4113.P0000607 t4113 Pat3-k1 1 CAPS t4113.G007 St2_haplotype_genome NA GGCACTAATTCAGAGTTTGC 0 0 CACAGAAGCATCATCAAATG 0 0 NA NA 0 0 1100 MboII NA 10.1038/s41598-020-74285-5 33051578 1 Otava haplotype St2 t4113.P0000608 t4113 MLP34 1 CAPS t4113.G007 St2_haplotype_genome Chr9 TGATTGGGGTACTGTTGGCT 7491747 7491766 AGTTGCTTTGAAGGCCTTGT 7492637 7492618 NA NA 0 0 130 Bsp119I NA 10.1038/s41598-020-74285-5 33051578 1 Otava haplotype St2 t4113.P0000652 t4113 CAPS5-3-2 1 CAPS t4113.G007 St2_haplotype_genome NA ACTCCACTATGCAAGTCCTATT 0 0 CCTTGTGTTAATGCATATGTGC 0 0 NA NA 0 0 944 BsaXI NA 10.3390/ijms19103065 30297627 1 Otava haplotype St2 t4113.P0000653 t4113 CAPS5-16 1 CAPS t4113.G007 St2_haplotype_genome NA ACATCCTACCAAACGACCCTTC 0 0 ACTGTCCTGATTTGAAGTCCTT 0 0 NA NA 0 0 820 BsaXI NA 10.3390/ijms19103065 30297627 1 Otava haplotype St2 t4113.P0000654 t4113 CAPS5-21-2 1 CAPS t4113.G007 St2_haplotype_genome Chr5 CCTTTTAATTTCTCTTTGTGAT 4216031 4216050 ATGGTGATATGAGGTTTATGAA 4216606 4216585 NA NA 0 0 582 BsaXI NA 10.3390/ijms19103065 30297627 1 Otava haplotype St2 t4113.P0000655 t4113 CAPS5-24 1 CAPS t4113.G007 St2_haplotype_genome Chr5 GGAATATACCAGGTGTCCAATT 4320133 4320154 CTTTTTGAGGAAACATACACCC 4320840 4320819 NA NA 0 0 709 BsaXI NA 10.3390/ijms19103065 30297627 1 Otava haplotype St2 t4113.P000097.1 t4113 SpCT226 1 CAPS t4113.G001 Stuberosum_448_v4.03 ST4.03ch07 AGCAGAGGAGCACCATACT 50611235 50611253 GGCATATTACTTGAATCCAATA 50611940 50611919 Blast_hit_num.:10 10.3389/fpls.2017.01729 29085380 1 DM_v4.03 t4113.P000098.1 t4113 SpAFLP2 1 CAPS t4113.G001 Stuberosum_448_v4.03 ST4.03ch07 CAACAAATAGGCATGTGAAGAAC 51368412 51368433 GACCCCACCAACCCAAAAAGAC 51368805 51368784 10.3389/fpls.2017.01729 29085380 1 DM_v4.03 t4113.P000100.1 t4113 SpGP127 1 CAPS t4113.G001 Stuberosum_448_v4.03 ST4.03ch07 GGTGATCGACTGGAACGTCT 53031730 53031749 CTGCAGATTCCTCGCATACT 53032495 53032476 10.3389/fpls.2017.01729 29085380 1 DM_v4.03 t4113.P000101.1 t4113 SpTG20 1 CAPS t4113.G001 Stuberosum_448_v4.03 ST4.03ch02 TCTTTGTGGGGTTTTGGAGTTTTT 38374365 38374388 GAGTGGCATGGTGTGGCAGTTCT 38376068 38376046 10.3389/fpls.2017.01729 29085380 1 DM_v4.03