marker_id species_id marker_name sub_number marker_type mapped_genome_id reference_seq_name chr fwd_primer_seq fwd_primer_start_pos fwd_primer_end_pos rev_primer_seq rev_primer_start_pos rev_primer_end_pos target_seq target_chr target_start_pos target_end_pos allele enzyme comments doi pubmed f_active assembly_version t3708.M000374.1 t3708 BnaC.BANa 1 CAPS t3708.G001 v4.1 chrC01 TTCCATGATCTAAAAACACTG 28125022 28125042 ATCAAGTAAAAAGATCAAAATC 28126337 28126316 NA no restriction site [Drakkar]; 800+600 [Stellar] NA 10.1007/s00425-009-1017-0 19760260 1 Brassica_napus_v4.1.chromosomes t3708.M001006.1 t3708 BnMSH1 1 CAPS t3708.G001 v4.1 chrA07 CCTCCTGCTTATGATATTGCTCTG 6014617 6014640 CTATATGGATTCCCTTAACGCGAC 6015315 6015292 NA NA NA 10.1266/ggs.87.19 22531791 1 Brassica_napus_v4.1.chromosomes t3708.M001006.2 t3708 BnMSH1 2 CAPS t3708.G001 v4.1 chrC07 CCTCCTGCTTATGATATTGCTCTG 13412284 13412307 CTATATGGATTCCCTTAACGCGAC 13412992 13412969 NA NA NA 10.1266/ggs.87.19 22531791 1 Brassica_napus_v4.1.chromosomes t3708.M001080.1 t3708 efMboI 1 CAPS t3708.G001 v4.1 chrA07 AAAVCCATCTCCACTGCAGCT 19148205 19148225 CAGCATCTACTCGAGATTGAC 19148484 19148464 NA NA MboI e: CAGCATCTACTCGAGATTGAC f: AAA(A/C/G)CCATCTCCACTGCAGCT 10.1111/j.1439-0523.2005.01081.x NA 1 Brassica_napus_v4.1.chromosomes t3708.M001200.1 t3708 SCA1 1 CAPS t3708.G001 v4.1 chrC08 AAGCTCTCCTCTGTAAACCTTGC 31826723 31826745 TTGCTCAATGTGACTCTTGCTC 31827187 31827166 NA approximate 240 bp [No. 2127-17] NA 10.1007/s10681-006-9084-9 NA 1 Brassica_napus_v4.1.chromosomes t3708.M001207.1 t3708 AFLP-K_CAPS 1 CAPS t3708.G001 v4.1 chrC08 GAACTCTTTGAGACCAGCTGAG 31826488 31826509 CGTCTAGGAGGCATCACAAGGA 31828003 31827982 NA 1478 [No. 2127-17]; 1081+397 [No. 2127-17 x ‘ZY821’ DH lines]; 1478 [No. 2127-17 x ‘ZY821’ DH lines]; 1081+397 [‘ZY821’] KpnI 10.1139/G07-044 17893738 1 Brassica_napus_v4.1.chromosomes t3708.M001648.1 t3708 MINI3a 1 CAPS t3708.G001 v4.1 chrA05 AGACCATAACAATCACCGAACC 8310445 8310466 ACACGATCAATCTCTGGTTCATT 8310642 8310620 NA 2 bands [JA177 (male)]; 1 band [SW Hickory (female)] PstI 10.1007/s00122-010-1388-4 20574694 1 Brassica_napus_v4.1.chromosomes t3708.M001762.1 t3708 ZAAS425/424 1 CAPS t3708.G001 v4.1 chrC02 CCTCGTAAACTCATGCAAAGAA 12014636 12014657 CTCCGAGTCAACGTCAATCC 12015497 12015478 NA NA NA 10.1007/s00122-011-1716-3 21993634 1 Brassica_napus_v4.1.chromosomes t3708.M001787.1 t3708 ZAASA7-19/20 1 CAPS t3708.G001 v4.1 chrC04 TGTCAAAGACAGGGATGA 24607484 24607501 TCCAGCCATCATTAGTCC 24607920 24607903 NA NA NA 10.1007/s00122-011-1716-3 21993634 1 Brassica_napus_v4.1.chromosomes t3708.M001804.1 t3708 ZAAS22/23 1 CAPS t3708.G001 v4.1 chrA04 TCTTTTGGCACATCTTTGAACT 17937617 17937638 TTTCCAGGATTCGTGATTGTT 17938547 17938527 NA NA NA 10.1007/s00122-011-1716-3 21993634 1 Brassica_napus_v4.1.chromosomes t3708.M001809.1 t3708 ZAAS1/2 1 CAPS t3708.G001 v4.1 chrA05 GCACCGGGTGCATAAGAT 3614606 3614623 TAGCCGATGGAATCATACCTG 3615244 3615224 NA NA NA 10.1007/s00122-011-1716-3 21993634 1 Brassica_napus_v4.1.chromosomes t3708.M001809.2 t3708 ZAAS1/2 2 CAPS t3708.G001 v4.1 chrC04 GCACCGGGTGCATAAGAT 5415574 5415591 TAGCCGATGGAATCATACCTG 5416217 5416197 NA NA NA 10.1007/s00122-011-1716-3 21993634 1 Brassica_napus_v4.1.chromosomes t3708.M001892.1 t3708 ZAAS337/336 1 CAPS t3708.G001 v4.1 chrAnn_random CAAAAGCCAGTTTTGGTTTCA 2056682 2056701 TCTCAACCTGCATGCAAAAC 2057055 2057036 NA NA NA 10.1007/s00122-011-1716-3 21993634 1 Brassica_napus_v4.1.chromosomes t3708.M001916.1 t3708 ZAAS502/503 1 CAPS t3708.G001 v4.1 chrC05 GTGGAGCCGTTGAAGGTCTA 36433504 36433523 GGCCTCTTTTTATGCAACACA 36433984 36433964 NA NA NA 10.1007/s00122-011-1716-3 21993634 1 Brassica_napus_v4.1.chromosomes t3708.M001938.1 t3708 ZAASA7-01/02 1 CAPS t3708.G001 v4.1 chrC07 CTCCCTCTTCTTCCTCCC 36005490 36005507 AGAAACGGCGTGTAGAAT 36006150 36006133 NA NA NA 10.1007/s00122-011-1716-3 21993634 1 Brassica_napus_v4.1.chromosomes t3708.M001943.1 t3708 ZAAS17/18 1 CAPS t3708.G001 v4.1 chrA09_random CGCCACCATCTTGCCGTA 3750175 3750192 AGAGGCTACACGGTCAAAGG 3751315 3751296 NA NA NA 10.1007/s00122-011-1716-3 21993634 1 Brassica_napus_v4.1.chromosomes t3708.M001943.2 t3708 ZAAS17/18 2 CAPS t3708.G001 v4.1 chrC08 CGCCACCATCTTGCCGTA 34777844 34777861 AGAGGCTACACGGTCAAAGG 34779021 34779002 NA NA NA 10.1007/s00122-011-1716-3 21993634 1 Brassica_napus_v4.1.chromosomes t3708.M001945.1 t3708 ZAAS7/8 1 CAPS t3708.G001 v4.1 chrA06 TTCGGCGAGCGTGACTGC 3320244 3320261 GCAACACGAATCTGTTCTTCAA 3320809 3320788 NA NA NA 10.1007/s00122-011-1716-3 21993634 1 Brassica_napus_v4.1.chromosomes t3708.M001945.2 t3708 ZAAS7/8 2 CAPS t3708.G001 v4.1 chrC05 TTCGGCGAGCGTGACTGC 3817599 3817616 GCAACACGAATCTGTTCTTCAA 3818162 3818141 NA NA NA 10.1007/s00122-011-1716-3 21993634 1 Brassica_napus_v4.1.chromosomes t3708.M002100.1 t3708 BnaIPMDH1-A02 1 CAPS t3708.G001 v4.1 chrA02 ATGGCGGCAGCTTTACAAACGAAC 913643 913666 TTAAACAGTAGCTGTAACTTTGGAGTCCAC 915544 915515 NA Undigested ['Express' (female parent)]; 873+1021 bp ['SWU07' (male parent)] SacI 10.1007/s00122-015-2487-z 25748114 1 Brassica_napus_v4.1.chromosomes t3708.M002100.2 t3708 BnaIPMDH1-A02 2 CAPS t3708.G001 v4.1 chrCnn_random ATGGCGGCAGCTTTACAAACGAAC 64596419 64596442 TTAAACAGTAGCTGTAACTTTGGAGTCCAC 64598326 64598297 NA Undigested ['Express' (female parent)]; 873+1021 bp ['SWU07' (male parent)] SacI 10.1007/s00122-015-2487-z 25748114 1 Brassica_napus_v4.1.chromosomes t3708.M002101.1 t3708 BnaAPR3-A03 1 CAPS t3708.G001 v4.1 chrA03 TTACCTAACAAGATTCAAGAAAGATGTCAAAGAATCA 22896025 22896061 ATGGCACTAGCAATCAACGTTTCTTCATC 22897605 22897577 NA 733+854 bp ['Express' (female parent)]; Undigested ['SWU07' (male parent)] HindIII 10.1007/s00122-015-2487-z 25748114 1 Brassica_napus_v4.1.chromosomes t3708.M002101.2 t3708 BnaAPR3-A03 2 CAPS t3708.G001 v4.1 chrC07 TTACCTAACAAGATTCAAGAAAGATGTCAAAGAATCA 38905750 38905786 ATGGCACTAGCAATCAACGTTTCTTCATC 38907935 38907907 NA 733+854 bp ['Express' (female parent)]; Undigested ['SWU07' (male parent)] HindIII 10.1007/s00122-015-2487-z 25748114 1 Brassica_napus_v4.1.chromosomes