Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d039311_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:1451511:1456285:-1 gene:Zm00001d039311 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proline-rich receptor-like protein kinase PERK1
Sequence	ATGTCGACGTCGCCGCCGCCGGCCACTTCCCCGCCCGGCGCGCCGCCCAACGGTACGGCC TCGCCCACTGCCGCGCCGCCGCCGCCGCTGCCGCCAGCACCGTCCAACTCCTCCTCCCCG ACGCCCGCGACGCCGACAGGCGCTCCCCCCACCGCTCCCGCGCCGCCCTCCACCGACTCT CCGGCGCCGCCAGGGACGCCGCCCGCCCCAGTGTCCCCGAACGCGGCCGCGCTCCCCGCG CCCGGAAGGGCGACGCCGGCCTCGGCCTCGCCGCCGACGCCCTCCTCCTCTGGGTCGGGG CTTACCACGTCCGTCGTTGTGGGGATCGCGGTCGGCGGCTTCGCCGTGCTGCTCCTCGGC TGCCTGTTCTGCCTCTGCCTCTTCAGGAGCAACAAGAGGAGCCGGAGGCGGCACCGCCAC CACCCGCCACCGCCGCCGCCGCCCCACCTCTTGCACTACTACGGCCACCCGCCGCCGCCG CCGCCGCCTCCGCACAAAGGGGATCAGCACCAAAGCTGGCAGCATAACGCCCCTCCACCA CCCCCTGATCATGTTATCAAGATCAATTCACATCCTACCCTTCCGCCGCCTCCGCATAAC GTACATAGCAGTGGTTCCGCTTCGAACCACTCGGGTGGTGAGAGCCGCCCTGCGCTGTCG CCTGGCACTGCCCTTAGCTTTTCAAGGAGCACATTCACTTACGAGCAGCTGATGACAGCA ACGAATGGGTTTTCTGACGCTAATCTGCTGGGGCAAGGAGGTTTTGGGTTTGTTCACAAA GGAGTGCTACCAGATGGCACAGAGGTTGCCGTTAAGCAGTTAAGAGATGGCAGTGGCCAG GGAGAGCGCGAGTTCCAGGCTGAAGTTGAGATTATCAGCAGAGTACATCACAAGCATCTT GTATCCTTGGTTGGCTATTGCATTTCTGGAGCCCACAGGTTGCTCGTCTACGAGTTTGTT CCAAACAATACATTGGAATTCCACTTACATGGAAGAGGCAGACCAACCTTGGATTGGCCA ACAAGACTAAAAATTGCTTTGGGTTCTGCGAAGGGATTGGCATATCTTCATGAAGATTGT CATCCTAAGATTATTCATCGTGACATAAAGGCCTCAAATATTCTTCTCGATCTAAGATTT GAAGCTAAGGTGGCAGATTTTGGACTTGCAAAATTCACTTCTGATGCAAACACCCACGTT TCAACCAGAGTGATGGGCACATTTGGGTATCTAGCACCTGAGTATGCTGCTTCTGGCAAG CTCACTGAGAAATCAGATGTCTTCTCTTTTGGAGTAATGCTTCTTGAGCTAATAACTGGG CGGCGCCCTGTAAATTCAAGACAAGCGGACGACAACCTGGTTGACTGGATATCATTGTTA TTATCGACTATTGAGGCAAGGCCTCTGATGATAAAAGCATTTGAGGATGGTAATCATGAT GCTCTAGTGGACCCCCGGCTGGGAAGTGAGTACAATGATAATGAGATGGCGAGGATGATA GCCTGCGCAGCTGCATGCGTCCGGCATTCTTCACGGCGGCGGCCACGGATGGGTCAGGTC GTCCGGGCGCTGGAAGGCGACGTATCTCTGGACGACCTGAACGAGGGCGTGCGGCCCGGG CACAGCCGGTTCGTGGGGTCGTACGGCAGTTCGACGTCCGACTACGACACCAGCCAGTAC AAGGAGGACCTGAAGAAGTTCCGGAAGATGGCGCTGGGCGGCAGCGGGCTCCAGAGCAGC AGCGCGCAGACGCCGACGAGCGAGCACGGGGAGAACCCGTCGGTGTCGGTGTCGAGCAGC GACGGCGACGGCGGCGGAGGAACCGGCGAGGAGCGTGAAGACAGACGGCAGGCAGCGTCG TGA

Peptide Sequence

PEP ID	Zm00001d039311_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:1451511:1456285:-1 gene:Zm00001d039311 transcript:Zm00001d039311_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proline-rich receptor-like protein kinase PERK1
Sequence	MSTSPPPATSPPGAPPNGTASPTAAPPPPLPPAPSNSSSPTPATPTGAPPTAPAPPSTDS PAPPGTPPAPVSPNAAALPAPGRATPASASPPTPSSSGSGLTTSVVVGIAVGGFAVLLLG CLFCLCLFRSNKRSRRRHRHHPPPPPPPHLLHYYGHPPPPPPPPHKGDQHQSWQHNAPPP PPDHVIKINSHPTLPPPPHNVHSSGSASNHSGGESRPALSPGTALSFSRSTFTYEQLMTA TNGFSDANLLGQGGFGFVHKGVLPDGTEVAVKQLRDGSGQGEREFQAEVEIISRVHHKHL VSLVGYCISGAHRLLVYEFVPNNTLEFHLHGRGRPTLDWPTRLKIALGSAKGLAYLHEDC HPKIIHRDIKASNILLDLRFEAKVADFGLAKFTSDANTHVSTRVMGTFGYLAPEYAASGK LTEKSDVFSFGVMLLELITGRRPVNSRQADDNLVDWISLLLSTIEARPLMIKAFEDGNHD ALVDPRLGSEYNDNEMARMIACAAACVRHSSRRRPRMGQVVRALEGDVSLDDLNEGVRPG HSRFVGSYGSSTSDYDTSQYKEDLKKFRKMALGGSGLQSSSAQTPTSEHGENPSVSVSSS DGDGGGGTGEEREDRRQAAS

Transcript Sequence

Transcript ID	Zm00001d039311_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:1451511:1456285:-1 gene:Zm00001d039311 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proline-rich receptor-like protein kinase PERK1
Sequence	ATGTCGACGTCGCCGCCGCCGGCCACTTCCCCGCCCGGCGCGCCGCCCAACGGTACGGCC TCGCCCACTGCCGCGCCGCCGCCGCCGCTGCCGCCAGCACCGTCCAACTCCTCCTCCCCG ACGCCCGCGACGCCGACAGGCGCTCCCCCCACCGCTCCCGCGCCGCCCTCCACCGACTCT CCGGCGCCGCCAGGGACGCCGCCCGCCCCAGTGTCCCCGAACGCGGCCGCGCTCCCCGCG CCCGGAAGGGCGACGCCGGCCTCGGCCTCGCCGCCGACGCCCTCCTCCTCTGGGTCGGGG CTTACCACGTCCGTCGTTGTGGGGATCGCGGTCGGCGGCTTCGCCGTGCTGCTCCTCGGC TGCCTGTTCTGCCTCTGCCTCTTCAGGAGCAACAAGAGGAGCCGGAGGCGGCACCGCCAC CACCCGCCACCGCCGCCGCCGCCCCACCTCTTGCACTACTACGGCCACCCGCCGCCGCCG CCGCCGCCTCCGCACAAAGGGGATCAGCACCAAAGCTGGCAGCATAACGCCCCTCCACCA CCCCCTGATCATGTTATCAAGATCAATTCACATCCTACCCTTCCGCCGCCTCCGCATAAC GTACATAGCAGTGGTTCCGCTTCGAACCACTCGGGTGGTGAGAGCCGCCCTGCGCTGTCG CCTGGCACTGCCCTTAGCTTTTCAAGGAGCACATTCACTTACGAGCAGCTGATGACAGCA ACGAATGGGTTTTCTGACGCTAATCTGCTGGGGCAAGGAGGTTTTGGGTTTGTTCACAAA GGAGTGCTACCAGATGGCACAGAGGTTGCCGTTAAGCAGTTAAGAGATGGCAGTGGCCAG GGAGAGCGCGAGTTCCAGGCTGAAGTTGAGATTATCAGCAGAGTACATCACAAGCATCTT GTATCCTTGGTTGGCTATTGCATTTCTGGAGCCCACAGGTTGCTCGTCTACGAGTTTGTT CCAAACAATACATTGGAATTCCACTTACATGGAAGAGGCAGACCAACCTTGGATTGGCCA ACAAGACTAAAAATTGCTTTGGGTTCTGCGAAGGGATTGGCATATCTTCATGAAGATTGT CATCCTAAGATTATTCATCGTGACATAAAGGCCTCAAATATTCTTCTCGATCTAAGATTT GAAGCTAAGGTGGCAGATTTTGGACTTGCAAAATTCACTTCTGATGCAAACACCCACGTT TCAACCAGAGTGATGGGCACATTTGGGTATCTAGCACCTGAGTATGCTGCTTCTGGCAAG CTCACTGAGAAATCAGATGTCTTCTCTTTTGGAGTAATGCTTCTTGAGCTAATAACTGGG CGGCGCCCTGTAAATTCAAGACAAGCGGACGACAACCTGGTTGACTGGATATCATTGTTA TTATCGACTATTGAGGCAAGGCCTCTGATGATAAAAGCATTTGAGGATGGTAATCATGAT GCTCTAGTGGACCCCCGGCTGGGAAGTGAGTACAATGATAATGAGATGGCGAGGATGATA GCCTGCGCAGCTGCATGCGTCCGGCATTCTTCACGGCGGCGGCCACGGATGGGTCAGGTC GTCCGGGCGCTGGAAGGCGACGTATCTCTGGACGACCTGAACGAGGGCGTGCGGCCCGGG CACAGCCGGTTCGTGGGGTCGTACGGCAGTTCGACGTCCGACTACGACACCAGCCAGTAC AAGGAGGACCTGAAGAAGTTCCGGAAGATGGCGCTGGGCGGCAGCGGGCTCCAGAGCAGC AGCGCGCAGACGCCGACGAGCGAGCACGGGGAGAACCCGTCGGTGTCGGTGTCGAGCAGC GACGGCGACGGCGGCGGAGGAACCGGCGAGGAGCGTGAAGACAGACGGCAGGCAGCGTCG TGAGGCGTGAGGCGTGCCCAGCCTACGGCCCCCGCGCATGCATCTGTAGATCCTAGTCCT CTCGACATCGCTACGTACATGTCTAATTGATAGCTGACCTGTGGCCGGGAGGCGGGACTA CTGAGAGATTCATGATTGCTTTCTTTTCTTTTGTGTGTGTGATTCTCTTGGTGGGTACAC TGGTCTCATGCATGCGATCTCTGTATAAATTCACCGACTCTTTAGGAACTGATTACTATT GGCT