Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d006834_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:2:217589675:217595755:1 gene:Zm00001d006834 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCTCGCCTACCTCCTCCACGCCCCAGCCACCGCCGTCGCCGTCGCCGCGGCGCCCTGT
GCCTCCTATCTCCGCTCACTCCCGCCGGCGAAGACCCCGTTCCTCCCCTCGCTCCCGCGC
CCGGTCTCGCCGAGGCGCGCCGCCGCCGCTTTCGCCTTCTCCCCCGCCGCCGCGGCGGCC
CCCATCGCGGCGTCGCTGCTCCAGGGCCCCGTGCTGGTCTGGGCCGGCCGGCTCTGCATC
TACTACGCGCTCCTCCACGTCGGGCTTGCCGGCTCTCCGCGCAATCCCTTCCTGTCCCAC
GAGATCGGCGGCGAGGACGGCGCCGGGGACAGCGACCTAGGGTTCTCCAAATGGGCCGAG
AAGCTCCGTGGCGGCGCCTCAGGTTTCGTGCACTTTTCTAAATCTTGTTTGCTCGATTGT
AATTGTTTATTTATGCATTTCTCGGATTTGCCGTTGATGCTCTGTCCGGTGGAAGTGAAG
ATTTATACGGGTTTGCCTGCATCTGTAAGGAGATTTCGGACGTGA

Peptide Sequence

PEP ID

Zm00001d006834_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:2:217589675:217595755:1 gene:Zm00001d006834 transcript:Zm00001d006834_T003 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MLAYLLHAPATAVAVAAAPCASYLRSLPPAKTPFLPSLPRPVSPRRAAAAFAFSPAAAAA
PIAASLLQGPVLVWAGRLCIYYALLHVGLAGSPRNPFLSHEIGGEDGAGDSDLGFSKWAE
KLRGGASGFVHFSKSCLLDCNCLFMHFSDLPLMLCPVEVKIYTGLPASVRRFRT

Transcript Sequence

Transcript ID

Zm00001d006834_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:2:217589675:217595755:1 gene:Zm00001d006834 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACCGAACACACGCGCACAGGGGACACTCGCGCACACTGCAGTCTGCAGCTAGCCCGTATC
GCCAATCGCCATGCTCGCCTACCTCCTCCACGCCCCAGCCACCGCCGTCGCCGTCGCCGC
GGCGCCCTGTGCCTCCTATCTCCGCTCACTCCCGCCGGCGAAGACCCCGTTCCTCCCCTC
GCTCCCGCGCCCGGTCTCGCCGAGGCGCGCCGCCGCCGCTTTCGCCTTCTCCCCCGCCGC
CGCGGCGGCCCCCATCGCGGCGTCGCTGCTCCAGGGCCCCGTGCTGGTCTGGGCCGGCCG
GCTCTGCATCTACTACGCGCTCCTCCACGTCGGGCTTGCCGGCTCTCCGCGCAATCCCTT
CCTGTCCCACGAGATCGGCGGCGAGGACGGCGCCGGGGACAGCGACCTAGGGTTCTCCAA
ATGGGCCGAGAAGCTCCGTGGCGGCGCCTCAGGTTTCGTGCACTTTTCTAAATCTTGTTT
GCTCGATTGTAATTGTTTATTTATGCATTTCTCGGATTTGCCGTTGATGCTCTGTCCGGT
GGAAGTGAAGATTTATACGGGTTTGCCTGCATCTGTAAGGAGATTTCGGACGTGAAAAAG
ATATTGTTTTTTCGCAGAATCTGATTTTACTGCCTTGATAGGAAGGACCATACAAGGTGA
TAGGTATTTCGATGCCTTCGGCAGAATTTGGCAATTCTGGGGCTATCTCAAACTGTAAAG
GGAGGTTAGCTTTAAGATGATATATGTAGAGGACTGTTTGATTTGCTGCCTAACTTGTCA
TAGGGCGTGTTTGGTTCGGCTTTTTTCTGACTAGCTTATCTGAAAAGCTGGTTGTGGGGA
AAAGCTGGCTGTTAGGAAAAGCTGGTGGTTAGAATTTAGGTGTTTGGTTCGCCAGCTGTG
CAGAAAAGCTGTTCGTGAGAATCTACGTGTTTGGATAATCAGAATGTGAAATTGCAGATT
CTGTTCGAAGAAACGATAAAATGAAACTCATAACGATGAAAAGGTCATTACAGAATAATT
AGAGCAGTTGATTACATCATTAGTCCCGTTACATTGTCATACTTAACTACGCCACTAAAG
CATTAGCAATTGCATCTCGAAAAGCACTCATGTCTAACTCATCAGATGTGGTACTACTAC
TCTCACCTAAATGTACATCATGACTGCTGCTACTAGGTCCTACTTCATCAAAGTCTCTAT
CGTGTAGAGCACTCTCTCTAATGAAGTTATGCAATGTCATACAAGCAATAATTATCTTCG
ACTGTTTGGCAAGCGAAAATGAAGGGAGACTTAATAGAACTCTCCACTTCATTTTAAGAA
CCCCAAACGATCGCTCTATAACATTGCGTAGCGAAGAGTGTGCATAGTTAAAAACTTCTT
TGCTGCCAATAGGTTGCCTCGCATTTTGCCATTCGGAAATGTGGTATTTCTGACCCTTAT
AAGGTGCAAGGTAGCCCTTTCTATTCGGATAACCGGAATCGACAAGATAGTATTTACCTG
CACAAACATGAAATACATAAGTTCAATACGTAACCAAGTAATTAATAGCATATGTCATAA
AAACCAGATATATAATTGAATACCTTCTGGTGGGTGGGGGAACCTGTCCGCATAAGTTAT
CAAAGTATCTTGCAGTACTCTAGTGTCATGTACGGATCCAGGCCATCCTGTGACAACAAA
AGTGAACCTCATATCGAAGTCACAAACGGCCATTACATTCTGCGAAGTGTAACCGTGCCG
TCCAATATATTTGGCTTGCTCTGAGGCCGGGACTGCCGCTGGAAAGTGACTACCATCAAT
TGCTCCTATGCAGTCCTTGAAGTGTGGCCAAAATCTCGCCTCTCGCAAACGCGGATGAAT
CTCCGTGAAATATGGGTCTTTGGGCTTAATGATGTCAGATGACATCTTAAACAGTGCATC
AAGGACTTCAGTATACTTGCGACTAATTGTTTCCAACGAGTGACCAAACTTATTCCTTAA
CTGCCTAAATGACTGTGGGGGGCTGTTTTGAACATAATACAACCTGGCATTGCCTGCACC
AAATGGTAGTTCCTAGTTTTAGATGGCCAATACTAATGTTAGTCTAGGAAAAAAAGATGT
ACTTACTTCATTTTGCTTGGCCCACCACTCATCTGGCGCACTGATTGAACCAGTATGAGG
GTCTCGACCAAGACCTGTAGCCCTTTCATTAAGAGTTTTCCACTGGGTGAACATTCTCTT
CAACGAATCCCACCTATTCTTCATTTGATCCCTGGTGTAAGTGCGACCAGTGCGTTCCTT
AAACTTCCTTATGAGGTTAGCATACCCTTCTGCATTTAGAAATTGTTGTGGCCTGTTCCG
AGCATTGACCTCTTCTACACAAATTTCTGTGTAAATTTTTGTTGCTCTACTATCCCACTT
TGCAATCACTTTGCCGGACTTGTCCATCTAGTGCATAACAAGTATATAGTATTCAACATA
CGTAGTAGTGCTCTCGGATTAAAAACAACAAAAACATGAACACTATACTGGCCATATTAA
CTTCAGGTAATACCATAAGTACTAAGATTCCAATTTCCTTAATTACACAACGACAACCTT
AAATAAACTGGTAGTGCACACAAAAGGACAGGGAACACATTTACAACAGCCCATTAACCA
AAAGAACAAACTCATTCCCTGTTTCCCTAAGACCTTACTACAGAAAAGCACAGTGAATTC
ATCCCTGTTATTCAAACACCTAACTCCAAGGTTCACTCCCTTCTACCTTAAACATCATTG
TCACTAAACGAAGGCATGTGATCGGAGTCATATTCAACACCCCAGAAGTTTTGGAAATGC
TCCGCAAAGTCCCAGTGTGGAGTAAGGTCGTCATCAGATGGGGGTGGAGACGACAAGGTA
GAAGGTTCATAGCTGCTGTCAACCGGGATGTTTACGTTGTTCACGATGTCCAAATGCTCT
TGCAACACCAGAGAGTCTTGCTCCAGCATGCAAGCTATCTCCTCCAAAGCTACACGAAGT
TTGGTAGCATCAAATGAGGTCAACCCACGTCCAGGACGGATTGTTTCCCTCGCTACGGAA
AATATCTTGTCCGAAATCTCTTGCATCCTTCCAATTGCCTTGTTGGCTATGGAGTCTGCT
GAATCCATCTGATGTGGATTTAGGTGGTCAGTTTACTACAGAAGGGGACAATCTAAGTTC
CATGTACTGACATTATTTGAGTGCTAACAATGACAAAGTTTGGTTGAAGCTATTAACATA
CAGGTTGTAACAAACAGAGAATGAACTGAACCGTGAACATACAGGTTGTGACAAACAAAC
GTAGAAGTAATCACTGCACATATCATACTTATACAAAAGAACAATGGTATCCCTAGGTAA
CAATAAACATATGACCATCCCAGCTCTCGTATCTCCAAGTAATATGCACAAATGACAGCA
CATATATAAATTGGTTGTGCCCATGTGGACAGTAAATTGCGCAAGAAATTGTGTATGAAA
GTACCTTGGATGCACTTGATCTTGGAACCGAAGACGAACAACTCGATACGCAAATCTGTA
GGCGACAATGCACAAAAATCTCTCTGTTAGTACGACGTTCCATACCCTTGAAGATGAATT
GATTTAACTGGAGAGGAGGGGGCGGCGTGGGTCGGGATTGAGGCCCAACCCTAGCAACAG
TAAAGGAGGGAGCGGGGTGGCTCGGGATGGAGGCGACGAATTCCGTACCTGCGAAGATGC
CAACGCGATGGTCGGGGACCGGAGGAACCAGCACGACGGACAAGGGCGCCGGTGTCACTG
CGGCAACCATAGCGAAACAGGAAACGGTGAAGGAAACGCGGCAGTGGGAGGAGAAGGGGA
TGGACGAGTTCGCAGAGGAGTAGTCCGTACCTGCGAAGACGACGATGCGGCGAGGAGAGG
GTCCGGCGGCGGTGCGTTGGGTCCGGATCTGCGGTCCGGTGGCTTGGCGGCGGCGGCGGT
GCGTTGCGGGGGTAGAACCCTAGCGAAGTGCGCGGGGGCTTCTATCCGAAGCCAAGTGAG
CGCGGCTTCGTGACGACCGTGGGAGCTCGGCTTCTTACCGAAGCGCGTCGCGCAGAAGCC
GGCCCAAAATCTGCGCGTTTGGTAGCAGCTTCTGCTTCTGGCGGCCAGAAGCCGACCAGA
AGCTGAACCAAACAGCCACATAGTTTGCCACTTCTAAGGTTAGACAAGTTTAACCAAGTT
AGGCATGTGTTTGGTTTGAAGCCATAGTTGTGGCAAAATTTTTCTCCTGCAACGTAGGTC
CTACTCGTCAATGACAGGCAAAAGTGTGGCAAGATTTCCTTAGGCGTGACAAACTATGAC
GCAGAATTTGAGCGTCTAACCTTAGGCAGGTGTGCCATAAAATTGTATGGCAATTTTTGG
CACCTTAGATATAGAACCAAACAGCTCCTAGATGTTTCAACATGTCACAATGTCATGGGG
GTCATGCACTGAGTTGATACTTGCTACATAGTATGAATGCGCCAACCCGAATGTTGACTT
GGTCTGGTGTTGATGGTTTAGGGTTTGTTTGGATGTCCATATACCCACCTTAATTTACAT
GTGTAAATTCCACATCAAACTTGTCCAACGTACATGGACTGAGGAGGATACATGGGCATC
TAAACAAGGCCTCAAATGGAATGAGTGAGTTTTGTAGACTTAATATGGTGAAGAGAACTA
AGTAGTCAAATTGGGTATGTTTGCGTGGGTACGATCTTGCACTTTGGTTGGCTTCCTTAG
CCAACTTTCACTGTACTTGCTACAAAGGATGGATTGACCAATATTCTTTTCTGGCTAGAG
AATAATATCATCCTTTTGTGACCTAGAGTATGTTAATGCCAAGCTGCTGTCTTTCTGTTC
CTTTTTTTTCTGTAGTACTCTGGAATTGAAATGCAATTCTGAACTTACTCCTTTTGACCT
TCTGGGTTTGTATTTCTTGAAATTGAAGAATCCATCTTCCATGCTATATCTAGCTGTACT
GGGATGAAAAAGTTCTCTTTTTTATATAATAATGATGACTAGTAACCTCTCAGTCAGTGT
TTGTAAGGCTCTTTAGATTCTTTACATTCAACTTTAACAAGGAAAAAGCCTGTACATAAC
CCCAGTGGCCCTCAAATAAATTTGTAGATGGAAACTTATATATACTCCATTACATTGTTT
TGCAATGGACGAGAAGGTTAATAGTCTTGAGCTTCTTGCTGATCAGGTGAAAAAGATGCT
CAGCATAAGGGAAAGCTAACTAGCAAATGGAAGCCGACCACCAAAGGCACACTGAAAAGA
ACTTACAGAGTACGATCAACGGATGAAGGAAGGCGGGTCCTCAAGGAGATCGCTTCAGTT
CTGTCCCAAGATGACCATTTTGTGGATGCCTCGTCTCACAAGGGTTGCCAAGTTAGGAGG
GAAAGTGCTCATGGCGAAAGTGTTTGCTGCTACAACGTGAGAGCGTTGTTCGATGAGCTT
CCAACTCCTCACCTGCTTCTGGAGATTACACCTTTCCCTGCTGGACAACTTACCGACAAC
GACTACCGAAAGGCGGAGAGGCTTGAGATGGTGCTGAGGCTCAGCGCTTCTATTTAAAAA
ACTGGGGACTGGTTTTTCAATTTCCCCTAGTACTTTCTTTGCCCAAGTTGTAAATTGTCT
TCCTGTGGGCCTGTAAATTGACGCAGTTGGCTAAGAACTACTTGCAAAACACAAGTTCTG
GTTGATTAATTTGAGCTTAAGAACCTGATATGATATACACTTGGGCGTTTCCCTGAACTG
TATCAAATGCTTCTCACTGTTTCCTTTTCCTTGAGTAAGGAAAATAGGGATGGGCATGGA
TTGAT