Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400006516
CDS Infomation

pacid=37462141 polypeptide=PGSC0003DMP400004511 locus=PGSC0003DMG401002542 ID=PGSC0003DMT400006516.v4.03 annot-version=v4.03
Sequence

ATGTCTACTGGGCCCCCCGGAGTGCCGTTGGGTCCGCCGTTGCCGTTTCCTCCGGCGGAT
AATGCAACTACTCCAACATCTCCGGTGAACCCAAGTACTACTCCTCCGTCTCCAGATGTT
GCTAGTCAGCCTTCTTCAGCGACCTTGGTAAATCCGCCGCCCTCATCGATTAATGGAAGC
TCTCCAACGAGTGCTCCGTCGAAGGGGTCGGCGAATAATACTACTTTAGTAGCACTTGGA
GTTGGAATTGGGATTGGAGGAGCACTTGTGCTTATATGCGTGTGCATTTTTGCCCTTTGG
TATAAGAGGAGAAAAAGGCGTCTTGGGTTAAATGGTTTTGGTCATGATCCATCTTCACAA
GGTCCTAAAGATAATTTGTTTGGTGGTCAACATCATCACTGGCAACAAAATGCTCCTCCC
TCAGCAGAAAACATGGTGAGGATTCCAATAAATCCCTCCCCTCCACCATCCATTACATCA
GTTTCACAAGTATCTGCAGCAGATGGATGTACTCCTCCACTGCCACCTTCCACTGGCAGT
AACTTCAGTACTGACAAACCTTTTCAACAAACAAATCCTGATTCCAACTTGAGTTTCTCG
AGAACTACATTCACCTATCAAGAATTAGCATTTGCTACCGATAATTTCTCTGTCGCCAAC
CTCCTTGGTCAAGGTGGTTTTGGATATGTATACAAGGGAGTATTCCGTGATGGGAAGGAG
GTTGCAATTAAGCAACTAAAAGCTGGAAGTGGGCAGGGGGAGCGTGAATTTCAAGCAGAG
GTGGAGATTATTAGTCACGTTCATCACAAGCATCTTGTTTCATTGGTTGGACACTGCATT
TCAGGGGTGCAACGGTTGTTAGTTTATGAATTTGTCCCAAACAAAACCTTGGAGTTCCAC
TTGCATGGCAAGGAGCATCCCCCACTAAGCTGGGAAACTAGGATGAGAGTTACTTTATGC
TCTGCGAGAGGATTGGCATATCTGCACGAAGAATGTCATCCCAAGATCATACATCGCGAT
ATCAAGGCCTCCAATATTCTTCTTGATGACAATTTTGATGCAAAGGTTGCTGATTTTGGG
CTTGCGAGGTTGAATTATGACTCTGATACTCACGTCTCCACACGAGTAATGGGAACTTTT
GGGTACTTAGCTCCTGAGTATGCTCTTACTGGGAAGCTGACTGAAAAGTCTGATGTCTTC
TCTTTTGGAGTCATGCTTTTGGAGATTATAACTGGTAGACGGCCAATTGATAAAGCTCAA
CACTACCTTGACGATAACATTGTTGATTGGGCGAGGCCTTTGCTTACCCAGGCTCTGGAT
GATGGCAACTTTGATACTCTGGCTGATCCAAGATTGGACAAGAATTATGACTTGACTGAA
ATGACCAGAATGGTCACGTGTGCTGCTGTGTGTGTGCGCCATCTAGCACGTCGCAGGCCT
CGTATGAGTCAGATTGTCAGAGCTTTAGAAGGAAATTTGCCGTTGGATGAGTTAAATGAT
GGACTTAGACCTGGACATAGTGGTATACATGAATCTTATGGGAGCTCGGATTTCGATGCT
GTTCAGTACAAAGAAGACCTTAAGAAATTTAGAAAGATGGCACTGGAAAGCCAGACACAT
AATTCTAGTGAATGCAGCGGGCCTACCAGCGAATTTGGCCCCCATCCTTCCGGTTCAAGT
AGTGAAGGCCTAAGAACAACTCAAGGTACACGCTCTAGTATTGAAGGTCATCGAGAAATT
AGAATAGACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400004511
PEP Infomation

pacid=37462141 transcript=PGSC0003DMT400006516 locus=PGSC0003DMG401002542 ID=PGSC0003DMT400006516.v4.03 annot-version=v4.03
Sequence

MSTGPPGVPLGPPLPFPPADNATTPTSPVNPSTTPPSPDVASQPSSATLVNPPPSSINGS
SPTSAPSKGSANNTTLVALGVGIGIGGALVLICVCIFALWYKRRKRRLGLNGFGHDPSSQ
GPKDNLFGGQHHHWQQNAPPSAENMVRIPINPSPPPSITSVSQVSAADGCTPPLPPSTGS
NFSTDKPFQQTNPDSNLSFSRTTFTYQELAFATDNFSVANLLGQGGFGYVYKGVFRDGKE
VAIKQLKAGSGQGEREFQAEVEIISHVHHKHLVSLVGHCISGVQRLLVYEFVPNKTLEFH
LHGKEHPPLSWETRMRVTLCSARGLAYLHEECHPKIIHRDIKASNILLDDNFDAKVADFG
LARLNYDSDTHVSTRVMGTFGYLAPEYALTGKLTEKSDVFSFGVMLLEIITGRRPIDKAQ
HYLDDNIVDWARPLLTQALDDGNFDTLADPRLDKNYDLTEMTRMVTCAAVCVRHLARRRP
RMSQIVRALEGNLPLDELNDGLRPGHSGIHESYGSSDFDAVQYKEDLKKFRKMALESQTH
NSSECSGPTSEFGPHPSGSSSEGLRTTQGTRSSIEGHREIRID*

Transcript Sequence

Transcript ID

PGSC0003DMT400006516
Transcript Infomation

pacid=37462141 locus=PGSC0003DMG401002542 ID=PGSC0003DMT400006516.v4.03 annot-version=v4.03
Sequence

ATGTCTACTGGGCCCCCCGGAGTGCCGTTGGGTCCGCCGTTGCCGTTTCCTCCGGCGGAT
AATGCAACTACTCCAACATCTCCGGTGAACCCAAGTACTACTCCTCCGTCTCCAGATGTT
GCTAGTCAGCCTTCTTCAGCGACCTTGGTAAATCCGCCGCCCTCATCGATTAATGGAAGC
TCTCCAACGAGTGCTCCGTCGAAGGGGTCGGCGAATAATACTACTTTAGTAGCACTTGGA
GTTGGAATTGGGATTGGAGGAGCACTTGTGCTTATATGCGTGTGCATTTTTGCCCTTTGG
TATAAGAGGAGAAAAAGGCGTCTTGGGTTAAATGGTTTTGGTCATGATCCATCTTCACAA
GGTCCTAAAGATAATTTGTTTGGTGGTCAACATCATCACTGGCAACAAAATGCTCCTCCC
TCAGCAGAAAACATGGTGAGGATTCCAATAAATCCCTCCCCTCCACCATCCATTACATCA
GTTTCACAAGTATCTGCAGCAGATGGATGTACTCCTCCACTGCCACCTTCCACTGGCAGT
AACTTCAGTACTGACAAACCTTTTCAACAAACAAATCCTGATTCCAACTTGAGTTTCTCG
AGAACTACATTCACCTATCAAGAATTAGCATTTGCTACCGATAATTTCTCTGTCGCCAAC
CTCCTTGGTCAAGGTGGTTTTGGATATGTATACAAGGGAGTATTCCGTGATGGGAAGGAG
GTTGCAATTAAGCAACTAAAAGCTGGAAGTGGGCAGGGGGAGCGTGAATTTCAAGCAGAG
GTGGAGATTATTAGTCACGTTCATCACAAGCATCTTGTTTCATTGGTTGGACACTGCATT
TCAGGGGTGCAACGGTTGTTAGTTTATGAATTTGTCCCAAACAAAACCTTGGAGTTCCAC
TTGCATGGCAAGGAGCATCCCCCACTAAGCTGGGAAACTAGGATGAGAGTTACTTTATGC
TCTGCGAGAGGATTGGCATATCTGCACGAAGAATGTCATCCCAAGATCATACATCGCGAT
ATCAAGGCCTCCAATATTCTTCTTGATGACAATTTTGATGCAAAGGTTGCTGATTTTGGG
CTTGCGAGGTTGAATTATGACTCTGATACTCACGTCTCCACACGAGTAATGGGAACTTTT
GGGTACTTAGCTCCTGAGTATGCTCTTACTGGGAAGCTGACTGAAAAGTCTGATGTCTTC
TCTTTTGGAGTCATGCTTTTGGAGATTATAACTGGTAGACGGCCAATTGATAAAGCTCAA
CACTACCTTGACGATAACATTGTTGATTGGGCGAGGCCTTTGCTTACCCAGGCTCTGGAT
GATGGCAACTTTGATACTCTGGCTGATCCAAGATTGGACAAGAATTATGACTTGACTGAA
ATGACCAGAATGGTCACGTGTGCTGCTGTGTGTGTGCGCCATCTAGCACGTCGCAGGCCT
CGTATGAGTCAGATTGTCAGAGCTTTAGAAGGAAATTTGCCGTTGGATGAGTTAAATGAT
GGACTTAGACCTGGACATAGTGGTATACATGAATCTTATGGGAGCTCGGATTTCGATGCT
GTTCAGTACAAAGAAGACCTTAAGAAATTTAGAAAGATGGCACTGGAAAGCCAGACACAT
AATTCTAGTGAATGCAGCGGGCCTACCAGCGAATTTGGCCCCCATCCTTCCGGTTCAAGT
AGTGAAGGCCTAAGAACAACTCAAGGTACACGCTCTAGTATTGAAGGTCATCGAGAAATT
AGAATAGACTAG