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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc12g013890.2.1
CDS Infomation

embryo defective 2737 (AHRD V3.3 *** AT5G53860.2)
Sequence

ATGTCTCGAGGCACTGATCGCTTACTGAAGAATTTGAAGCAATTCACTGACCTTCAATAC
AAGTACTTCAGTAGCCGCTATGGACAGCAACTCATTGACATTTTCGAATTTCCAATAAAG
CTTGTTCTTTCACCTATTACACTTGCATATGACATTGCCGGCTCTGCTCCGAGAGGTTTC
GGTGTACCTGAATTCATCTCTAAGCTCTCTTATTCGACCATCTTTGTGGTAGCTACTCTG
GGTACTTATGACATTGCAATGGAGCTCGGAAAGAAGGTGATCAGCCAGAGGGACTGCCGG
ACATGCTGTGGGTGGCAGGCGTTGCAGTGCACAATGTGCAAAGGATCAGGCAAAGTGCAT
TACCAAGTGAAGAACTACACATTGAAAAGGGGAGAAAAAGCCACAGCTGAATCCATTGCT
GATGCGATAGCTGATAACAGAGCTGAGTTGGTGCATCTTCCTTCCACAGTGGACCTTCAC
TTGCCACTGCCATCTAAAGAATGTCCCAGTTGTGATGGATCGGGTGTGATGAAATGCCCG
GAATGCAAAGACAAACTGCAGATAAAGATATCTGCAGATGATATTATGGAGCCTCCTTGG
AAAGCTTATAATATCATGAGGAAGATGGATTATCCTTACGAGCATATTGTTGATAGTATG
AAGGACCCCAGCATTGCTGCATTTTGGTTGCTTACCTTGCCTCAGATTGTGGGTGGATTT
GAATATGATGATGATGTCAAGAAGAAGATTTGGTGGCAATATAAGGAATCTATGCGATAT
GATCAACTTCGAGATGTGGTGGCCAAGAGAAAACCTGGATGGGAGTATTTGCAAGAAGCC
TTGGTCTCTATTGATCCTGCCCGAGCAAGAGAAGATCCTATTATTGTGAAAAACGTTCCT
TACTTCAAGGCCAAGAAAACTCTGGAGGCAGAAGTCATGAAGCTTGACCCTCCGCCGCGT
CCTCAAAATTGGGGGGAGTTGAACCTTCCATTAAACGCATCTTCTTGGAGTGAAAAGGAC
CTCAAAGACCCAAAAAAGCTCTATGAGATGACAGTTCTTCTTAATGCACAGAGAGAAATT
TCTGAAAAGATGCTGGATGCCCAGTGGGAAGCGAAATGGAGAGAAGAAAAGCTTAACAAA
ATGTTGGAGGAGAAGGTACGACCATACATTCAGAATATCGACAATACTGTACTTCCTCAA
CCTATTGTTATGGAGTCAGAAAGGAATCAGGATCAAAAGAGAAAGCATGGACGAAGGAGA
TGGTGGTTATTTTGA

Peptide Sequence

PEP ID

Solyc12g013890.2.1
PEP Infomation

embryo defective 2737 (AHRD V3.3 *** AT5G53860.2)
Sequence

MSRGTDRLLKNLKQFTDLQYKYFSSRYGQQLIDIFEFPIKLVLSPITLAYDIAGSAPRGF
GVPEFISKLSYSTIFVVATLGTYDIAMELGKKVISQRDCRTCCGWQALQCTMCKGSGKVH
YQVKNYTLKRGEKATAESIADAIADNRAELVHLPSTVDLHLPLPSKECPSCDGSGVMKCP
ECKDKLQIKISADDIMEPPWKAYNIMRKMDYPYEHIVDSMKDPSIAAFWLLTLPQIVGGF
EYDDDVKKKIWWQYKESMRYDQLRDVVAKRKPGWEYLQEALVSIDPARAREDPIIVKNVP
YFKAKKTLEAEVMKLDPPPRPQNWGELNLPLNASSWSEKDLKDPKKLYEMTVLLNAQREI
SEKMLDAQWEAKWREEKLNKMLEEKVRPYIQNIDNTVLPQPIVMESERNQDQKRKHGRRR
WWLF*

Transcript Sequence

Transcript ID

Solyc12g013890.2.1
Transcript Infomation

embryo defective 2737 (AHRD V3.3 *** AT5G53860.2)
Sequence

TAGTAGAAAATAAAAAATGGTACTCCCAAATCCTATCCCTACACAACTGAGCTTGAAATA
CGCCTATCTCCCTCTTTATCCTTTTTTCCATCTTCTTCTTCTTCTTCAACTAGTTGAATG
TTTGAGCAATGTCTCGAGGCACTGATCGCTTACTGAAGAATTTGAAGCAATTCACTGACC
TTCAATACAAGTACTTCAGTAGCCGCTATGGACAGCAACTCATTGACATTTTCGAATTTC
CAATAAAGCTTGTTCTTTCACCTATTACACTTGCATATGACATTGCCGGCTCTGCTCCGA
GAGGTTTCGGTGTACCTGAATTCATCTCTAAGCTCTCTTATTCGACCATCTTTGTGGTAG
CTACTCTGGGTACTTATGACATTGCAATGGAGCTCGGAAAGAAGGTGATCAGCCAGAGGG
ACTGCCGGACATGCTGTGGGTGGCAGGCGTTGCAGTGCACAATGTGCAAAGGATCAGGCA
AAGTGCATTACCAAGTGAAGAACTACACATTGAAAAGGGGAGAAAAAGCCACAGCTGAAT
CCATTGCTGATGCGATAGCTGATAACAGAGCTGAGTTGGTGCATCTTCCTTCCACAGTGG
ACCTTCACTTGCCACTGCCATCTAAAGAATGTCCCAGTTGTGATGGATCGGGTGTGATGA
AATGCCCGGAATGCAAAGACAAACTGCAGATAAAGATATCTGCAGATGATATTATGGAGC
CTCCTTGGAAAGCTTATAATATCATGAGGAAGATGGATTATCCTTACGAGCATATTGTTG
ATAGTATGAAGGACCCCAGCATTGCTGCATTTTGGTTGCTTACCTTGCCTCAGATTGTGG
GTGGATTTGAATATGATGATGATGTCAAGAAGAAGATTTGGTGGCAATATAAGGAATCTA
TGCGATATGATCAACTTCGAGATGTGGTGGCCAAGAGAAAACCTGGATGGGAGTATTTGC
AAGAAGCCTTGGTCTCTATTGATCCTGCCCGAGCAAGAGAAGATCCTATTATTGTGAAAA
ACGTTCCTTACTTCAAGGCCAAGAAAACTCTGGAGGCAGAAGTCATGAAGCTTGACCCTC
CGCCGCGTCCTCAAAATTGGGGGGAGTTGAACCTTCCATTAAACGCATCTTCTTGGAGTG
AAAAGGACCTCAAAGACCCAAAAAAGCTCTATGAGATGACAGTTCTTCTTAATGCACAGA
GAGAAATTTCTGAAAAGATGCTGGATGCCCAGTGGGAAGCGAAATGGAGAGAAGAAAAGC
TTAACAAAATGTTGGAGGAGAAGGTACGACCATACATTCAGAATATCGACAATACTGTAC
TTCCTCAACCTATTGTTATGGAGTCAGAAAGGAATCAGGATCAAAAGAGAAAGCATGGAC
GAAGGAGATGGTGGTTATTTTGATTGTATTTGCTTAGCCAGTACAATTGCTACTAGACTC
ATGAGAAATCTAATGCTTATAGCTACTTTTTTTTTGTAGATTGCAACAGTTCCTTTCATT
CTAGTTTTTCTTCCTCCTTTATGTTCTTCTATTCAAGTGTTTGCCCTCCCCCCC