Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc12g005290.2.1
CDS Infomation	Serine/threonine-protein kinase (AHRD V3.3 *** A0A0V0IT75_SOLCH)
Sequence	ATGAAGCTGCTACAAACAACTATTCATTTCTTGTTTGTTTTCTACTTATTTTCCATTTTC CAAGTTTCATTAGGGGATACCATCACAACAAGTCAATTTCTCAAAGATGGTGAACCTAAT ATCACATCATCAGGTGGAAGTTTTCAAATGGGTTTTTTTAGTCCAGGTAATTCGAAAAAT CGTTATCTAGGTATATGGTATAGTAACATATCTGTAACTACGGTTGTTTGGGTTGCCAAT AGAGAAGCGCCTTTAGCAACAAATTCAGGTACTCTAAAAGTTATCAAACCAGGAATACTT GTTATAGTGAATGATAGTAACCACATCATATGGTCTACCAATACTTCCAGATCTGTGCAA AACCCTGTTGCGAAATTGCTTGATTCTGGAAATCTTGTTGTTATTGATGCTGTTGGTGAT GATATTGAAATTGGGGATTTTCTCTGGCAGAGTTTTGATTACCCAACTGATACCCTTTTG CCAGGGATGAAAATTGGGTGGAATTTTGTGACTGGGAAGGAACTGTATCTGTCTTCGTGG AAGAACGAGGAGGATCCAGCTCCGGGTGATTATACGTACCATTGTGATCCTTCTGGTTAC TTGCAGAATGTGTTGAAGAAAGGTTCTAAGGAGGTATACAGATCTGGGCCATGGAATGGC TTAAGGTTTAGCGGAGCAACAAATTCAAGACAAAGTCCATTTTATACATTTGGTGTCATC TCAACTAAAAATGAGGTGTATTTTAGTTATCACCTTCTAGCTTCGGTCATTACAAGGTTT TGTTTGAATCCAAATGGTGCGTTACAACGATGGACTTGGGGCGATAGGAATAAAGGTTGG GCACTTTACCTTTCATTACCAACGGATAATTGTGATACTTATAAGTTGTGTGGAGGATAT GGTAGTTGTAATAGTTTGAATTCTCCGGTATGTGGATGTTTAGACAAGTTCGAGCCTAAA CATGTTGAAGATTGGGGGAAGGCAGATTGGTCTAGTGGTTGTGTTAGGAGGATTGATCTG AATTGCATCAAGGGAGATGGTTTTTTGAAGTATACGAAACTTAAATTACCAGACACGCGG AATTCATGGTTTAATGTGACTATGAACCTTGAAGAATGCCGGAAAGTTTGCTTGAGAAAT TGCTCTTGTATGGCTTATTCAAATCTTGACATACGCAATGGAGGAACCGGTTGCTTACTG TGGTTTGAAGATCTACTAGATATTCGACAGCTAGCCAAAGAAGGACAAGATATCTACATT AGAATGGCTGCCTCAGAATTAGCTAGTCAGGTGAAATCAAATGGACACAAAGGAAAATCA CTATCCTGGATTATCCCCTTATCGGCTGGAGTGATTTTGGTAATCCTAAGCCTAGTGGTC TGGATTAGAAGAAGGAAGATAGCTTCAGAGAAAAAGAAAGGATGCTTTGGGCGCAATGGC AATTACAAGATGGATTACCTCAATGGAAACCTCAGCGAAGAATATGAGTTACCACTGTTT GACTTATCTACAATAGCTAAATCTACAAACAACTTTTCAGGGACGAGCAAAATTGGAGAG GGTGGATATGGACCTGTTTACAAGGGCGTGCTTGAACACGGACAGGAAATAGCTGTGAAG CGGCTGTCCAGGACTTCCACACAAGGACAAGATGAGTTCATGAATGAAGTGATGTATATT GTGAAACTTCAGCATAGAAATCTTGTGAAGATTCTCGGATGTTGCATCGAAGGAGAAGAA AGAATGTTGATCTATGAGTACATGCCAAGTGGAAGTCTTGATTCATTTATATTTGATGAC ACACGAAGCACGGTATTAGACTGGTCTAAGCGCTTTCACATAATCAACGGGATAGCTCGG GGACTTGTGTATCTGCATCAAGATTCTCAGTTGAGGATCATTCACAGGGACCTGAAAGCT AACAACATTTTACTAGACAATGACATGAATCCAAAGATATCAGACTTCGGTATAGCAAGA AGTTGTGAAGATGACAAGTTTGGAGCCAAGACACACCGAGTAGTTGGAACATATGGCTAC CTCTCACCGGAATATGCTGTACATGGTGTCTACTCGGTGAAGTCAGATGTATTTAGCTTT GGTGTCTTAGTTCTTGAAATTGTAAGTGGGAAAGGGAACAGAAAATTCTCTCATCCGGAT CATAACCTTAACCTCCTTGGACATGCATGGACACTCTATAAAGAAGGTAGATCAATGGAA TTACTCGGGGATTTCCCCATTGGTGTTTGTTCTACACCTGAAGTTATACGATCAATCCAT GTTGGTCTATTGTGTGTGCAACATCGTCCAGAAGATCGTCCAAGTATGTCTTCAGTGGTT ATGATGTTAAACAATGAAGGTGTACTGCCACCTGCTAAACAACCAGCTTTCTTCGTAGAA ACAAACACACCAGATAGTGAATTCTCTTCTAGTCAACATGCACATAGTACAGTGAATGAG ATCACCATCACAACATTAGATCCCAGATAG

Peptide Sequence

PEP ID	Solyc12g005290.2.1
PEP Infomation	Serine/threonine-protein kinase (AHRD V3.3 *** A0A0V0IT75_SOLCH)
Sequence	MKLLQTTIHFLFVFYLFSIFQVSLGDTITTSQFLKDGEPNITSSGGSFQMGFFSPGNSKN RYLGIWYSNISVTTVVWVANREAPLATNSGTLKVIKPGILVIVNDSNHIIWSTNTSRSVQ NPVAKLLDSGNLVVIDAVGDDIEIGDFLWQSFDYPTDTLLPGMKIGWNFVTGKELYLSSW KNEEDPAPGDYTYHCDPSGYLQNVLKKGSKEVYRSGPWNGLRFSGATNSRQSPFYTFGVI STKNEVYFSYHLLASVITRFCLNPNGALQRWTWGDRNKGWALYLSLPTDNCDTYKLCGGY GSCNSLNSPVCGCLDKFEPKHVEDWGKADWSSGCVRRIDLNCIKGDGFLKYTKLKLPDTR NSWFNVTMNLEECRKVCLRNCSCMAYSNLDIRNGGTGCLLWFEDLLDIRQLAKEGQDIYI RMAASELASQVKSNGHKGKSLSWIIPLSAGVILVILSLVVWIRRRKIASEKKKGCFGRNG NYKMDYLNGNLSEEYELPLFDLSTIAKSTNNFSGTSKIGEGGYGPVYKGVLEHGQEIAVK RLSRTSTQGQDEFMNEVMYIVKLQHRNLVKILGCCIEGEERMLIYEYMPSGSLDSFIFDD TRSTVLDWSKRFHIINGIARGLVYLHQDSQLRIIHRDLKANNILLDNDMNPKISDFGIAR SCEDDKFGAKTHRVVGTYGYLSPEYAVHGVYSVKSDVFSFGVLVLEIVSGKGNRKFSHPD HNLNLLGHAWTLYKEGRSMELLGDFPIGVCSTPEVIRSIHVGLLCVQHRPEDRPSMSSVV MMLNNEGVLPPAKQPAFFVETNTPDSEFSSSQHAHSTVNEITITTLDPR*

Transcript Sequence

Transcript ID	Solyc12g005290.2.1
Transcript Infomation	Serine/threonine-protein kinase (AHRD V3.3 *** A0A0V0IT75_SOLCH)
Sequence	AAAAGTCGAAACTTATTCAGTATAAAATATGTCCTAAATTTTTTGTTGTCGTGTGAACAC ACCAACCTGCTGAATCCTGAATGTCTGCGACTTCCCTGTTTTGATGACTCGTTTTGGCAG TCTCCATTACCAAATCAGCTAAAAATAGTAATAATACTAGTCTTTGATTGTACTGCAAAG AGCTCCAAAAATGGAAGAATTTCACTAATAGATAAGCTGTATTTTATAATTTTCAACCAT GAAGCTGCTACAAACAACTATTCATTTCTTGTTTGTTTTCTACTTATTTTCCATTTTCCA AGTTTCATTAGGGGATACCATCACAACAAGTCAATTTCTCAAAGATGGTGAACCTAATAT CACATCATCAGGTGGAAGTTTTCAAATGGGTTTTTTTAGTCCAGGTAATTCGAAAAATCG TTATCTAGGTATATGGTATAGTAACATATCTGTAACTACGGTTGTTTGGGTTGCCAATAG AGAAGCGCCTTTAGCAACAAATTCAGGTACTCTAAAAGTTATCAAACCAGGAATACTTGT TATAGTGAATGATAGTAACCACATCATATGGTCTACCAATACTTCCAGATCTGTGCAAAA CCCTGTTGCGAAATTGCTTGATTCTGGAAATCTTGTTGTTATTGATGCTGTTGGTGATGA TATTGAAATTGGGGATTTTCTCTGGCAGAGTTTTGATTACCCAACTGATACCCTTTTGCC AGGGATGAAAATTGGGTGGAATTTTGTGACTGGGAAGGAACTGTATCTGTCTTCGTGGAA GAACGAGGAGGATCCAGCTCCGGGTGATTATACGTACCATTGTGATCCTTCTGGTTACTT GCAGAATGTGTTGAAGAAAGGTTCTAAGGAGGTATACAGATCTGGGCCATGGAATGGCTT AAGGTTTAGCGGAGCAACAAATTCAAGACAAAGTCCATTTTATACATTTGGTGTCATCTC AACTAAAAATGAGGTGTATTTTAGTTATCACCTTCTAGCTTCGGTCATTACAAGGTTTTG TTTGAATCCAAATGGTGCGTTACAACGATGGACTTGGGGCGATAGGAATAAAGGTTGGGC ACTTTACCTTTCATTACCAACGGATAATTGTGATACTTATAAGTTGTGTGGAGGATATGG TAGTTGTAATAGTTTGAATTCTCCGGTATGTGGATGTTTAGACAAGTTCGAGCCTAAACA TGTTGAAGATTGGGGGAAGGCAGATTGGTCTAGTGGTTGTGTTAGGAGGATTGATCTGAA TTGCATCAAGGGAGATGGTTTTTTGAAGTATACGAAACTTAAATTACCAGACACGCGGAA TTCATGGTTTAATGTGACTATGAACCTTGAAGAATGCCGGAAAGTTTGCTTGAGAAATTG CTCTTGTATGGCTTATTCAAATCTTGACATACGCAATGGAGGAACCGGTTGCTTACTGTG GTTTGAAGATCTACTAGATATTCGACAGCTAGCCAAAGAAGGACAAGATATCTACATTAG AATGGCTGCCTCAGAATTAGCTAGTCAGGTGAAATCAAATGGACACAAAGGAAAATCACT ATCCTGGATTATCCCCTTATCGGCTGGAGTGATTTTGGTAATCCTAAGCCTAGTGGTCTG GATTAGAAGAAGGAAGATAGCTTCAGAGAAAAAGAAAGGATGCTTTGGGCGCAATGGCAA TTACAAGATGGATTACCTCAATGGAAACCTCAGCGAAGAATATGAGTTACCACTGTTTGA CTTATCTACAATAGCTAAATCTACAAACAACTTTTCAGGGACGAGCAAAATTGGAGAGGG TGGATATGGACCTGTTTACAAGGGCGTGCTTGAACACGGACAGGAAATAGCTGTGAAGCG GCTGTCCAGGACTTCCACACAAGGACAAGATGAGTTCATGAATGAAGTGATGTATATTGT GAAACTTCAGCATAGAAATCTTGTGAAGATTCTCGGATGTTGCATCGAAGGAGAAGAAAG AATGTTGATCTATGAGTACATGCCAAGTGGAAGTCTTGATTCATTTATATTTGATGACAC ACGAAGCACGGTATTAGACTGGTCTAAGCGCTTTCACATAATCAACGGGATAGCTCGGGG ACTTGTGTATCTGCATCAAGATTCTCAGTTGAGGATCATTCACAGGGACCTGAAAGCTAA CAACATTTTACTAGACAATGACATGAATCCAAAGATATCAGACTTCGGTATAGCAAGAAG TTGTGAAGATGACAAGTTTGGAGCCAAGACACACCGAGTAGTTGGAACATATGGCTACCT CTCACCGGAATATGCTGTACATGGTGTCTACTCGGTGAAGTCAGATGTATTTAGCTTTGG TGTCTTAGTTCTTGAAATTGTAAGTGGGAAAGGGAACAGAAAATTCTCTCATCCGGATCA TAACCTTAACCTCCTTGGACATGCATGGACACTCTATAAAGAAGGTAGATCAATGGAATT ACTCGGGGATTTCCCCATTGGTGTTTGTTCTACACCTGAAGTTATACGATCAATCCATGT TGGTCTATTGTGTGTGCAACATCGTCCAGAAGATCGTCCAAGTATGTCTTCAGTGGTTAT GATGTTAAACAATGAAGGTGTACTGCCACCTGCTAAACAACCAGCTTTCTTCGTAGAAAC AAACACACCAGATAGTGAATTCTCTTCTAGTCAACATGCACATAGTACAGTGAATGAGAT CACCATCACAACATTAGATCCCAGATAGTAAATTCTTCATTGCAAATAGAAATCCTTCAT TCTTTTCTTCTTTGTAGCAATGTAGGGCGAAAGTTCCCACTCCAGCTACTCAAGAAGAGT GCAGTCATCTTCTTGTAACATGGTGCAACACTGCTAACATGTGTTAAAACATTTTCTTTC AACTATTTCACTACAACTTGTTACTTTGTACAAAGGTGAATAGGAAATATTATGTCCTAT CCCAAATAGTTTGAGTTTAACGCAGAATTGCCCGATTGATGGACCAATTTTGCTTTCACT GTATGGTTTATTTTATGTAATGTGCATCACTTTTTTGAACTTTCAAAATAATTTTCTTTT ATGAAGGTTCTAAATTTTGTTTATGTTTGAATAAATAAGAAATTTTTCATCTTTGTATTG CTGCCTTTTGTAATTCTGGTCAACATAAACTTCAACCAATCAATTCTTATAACAGTTTAT TTTATAGTCAAGCATCCTCAAGAAGCAACAGTACACAGAAAACATAATAAGAGAAGTACC AAAACAAAAAAAATCTTGCAGACAAGGCTTGTGAACTGCTTATACACAACCTCAACGCCT CAAGTAAAGAACTAGAAATCTAAAAACAGAATACAGAACAAGATATTCAACTTAGAAACT CTCATTATAATTTTTCTCCTATATATGCTTTCGATAAAACTCATCTACATCCGAAACTGG GAAAGACACTAACATGTAGTTGTTGACGAAGTCTTCAATTACTCAAACAATAATTACCTA TAGAGTTAATTTAGCAAATGCCACTGTCTCAGGCAGAACAAATGATGCACACAACATCCA TTTTCCTGGTGCAACAAGGCGAACTTTGTGCATCTGTACCTCAAAAGCCACCTCAGACAG TGCAATCCTGATTTTCTGTTCAAGTTTCAAAGAAGAAAAATTCAGCATTCCCCCTCGGTA ATACCAGATGAAAAGAAATAGCGCACAAACTAACAACCGACCTCATGAAAATCGAATTCA GGATCCTGAGCTTTCGAAAAACCATATACATGAATCCTTGGCAAGGTAAATTGCTTATCC GCGTGCTTATTTCTGAAAATTCCTCTAAAAGAATCTGCAAGCATGAGAATGATTGGAGCC TTTAGGATTAAAACGATAAATCAACTTTTGGGCAAAACTCTTTCCCACTTGTAATAATAT ATATATATGATTGCGTACCAAGAAATTCTGCAGCATCATTAGGCAAATTCATTACTACTT GAGTAATTGGCCTAGCTTTTTCACTTGCAAAAATGCTGTCAATGAACCTCCGCCCATCCA TGTTAAAAATCTACAAAATAAACAAGATCAGTATTTCGTGACACCATACATCACTGGATA AATGAATTCAAGAAACCAAAAGTTAAATATAAATCATTCATACACCTGCAAGATCAAGGG TGTAAAATAAGTGAACTGATGTCGGTGAGTTTGTACCTCAAGATCACTGTTTTTTACTAT ATATATGTTATATGTAGATCTTATGCATTATTCAGAACTTAGTGACATACCAGAAAATAT TACTTGCATGTAGATGAATTTATACCTCAATCTTCCTCTCAAGTTTGTTACGGACACAGT TTCTCTCCAGATATTCAACAGCATTAGGGTTCAAATCATTAGCGTATACATATTTGACCT TCTTTGCAGCAGATATTGCAATGGGACCCACCCCAGCAAAAACATCACCTATAGAGAAAT AAACAACTGTGAGAAACAGAGAGAACAAAAGGATATAATGCAAGTTAAAAGAGAAACCAC ACAAAGATTAATTCAGATAATAAGCAAATGACAAAACAGTTTGGAGCAGACCAGTTCATT CATATTAATTTTAGGTACTCTTGAAGTAGTGTCAGTTTCTTTAGTTGTGTACTGTCACAT GCATATTGCTTAACTTGAGAAAAAACTCAAGCAGCAATTCTTTTAAGACTTTTAAAATAG TAACTGCTGACCCCATGATAGGCTAAATAGTGCGAGTGTAGTGGAACTCGAAAAAAGAAA TCAAATTGGAATCATAGAGTTACCAAGTCTGGAACTCAAGTATGCATGTAACATAGTATT CAAGAAAACTTACAAACAACATCATTGTTGGTGAAGCAACTAAGAAGCCTTTGCCTTTCG GTTGCCAGCCTAGAATTCCAATATCTACCAGAAAATGACAATTTATAGAAGAAAAAAAAC AAGGAATATCAGATTCTGCTAATAGGAGGTTTTCATCTTTACTTCTATTCTTATTAGCTT ACACTCACACTGCTGCTAAATCAACATCAAAATAGAGTCCATTCTCGACTACAGTTGTAA CAAGAGAGTGATTTCCTGCCAGAACTTCGAGCTGCATTGTTCTGTAGTCATTGTGGATGA CATCAGTTTTATTGACAACTGTTTGTATCTTCGGCTTGTTCTTGTCCAGGACTACCTGTA AAAAACAATCTCAAGAAATAAGCTGAAATTCATAGAACCATAAAAAATGTGGTAGATGTG TAGAAACCAGGTACCTTTGCAATAAGTTTCTTGTATGGGAAATGCTCATCTCTCAAGTTT AGATGGGCAATATGCCCAACTGTCTCAAAAGCTGAAGGAACAATCATACCTTGTGGAAGC AAGACCGCTAAGACCTGCAAGATGCAAATCCCTCATTTTTGCAAGATCCACCAGCTACTT GTCCATATTCATGACAGTTCCAATATTCCACACAGCACAGCTCAAATGGATGAATGCAAA AGTAAATAGGAATAAAGCAAAGGCTTCGCCTTATAAATCCCATCCAACTATACACTACTT ACGATATATTCAAGAGTACGGTAATTGACAAAGCACATGTTGATTTACCCATGAACCTTC CATGCTCGACTGGAAATAGGAAATGCTTAAACGGCTAAAAGGAATATCCATCCTAGAAAG GCATTACAAATAGCAAAACTGAGACACATGGTCAACAATATTTGAGGGACATACCCTCAT TCAGGAGGAATATATGGTGTGGGCAATGGGCTCTGATGATGCAGACTTTTCCTGTGCTTA ACAACTTATGCCAAGCTCAGAATACTAGTGTGGCTGAACTATGTGACAGGATAATGGTGG AACCTTTATCTTAGAAGGATCCTGAATGACTGGGAGATGACCTTTATAGCAGTTTTTCTG AATATAGTCCCTCAAAACCTCAATCTTACAGAAGAAAAGAACAGTTTGGTGTAGAAGGTG GACAACAGAGGTATTTTGCTTACAAAGACTTGTCAACATCATTGGCTGTTGTGACGGGGG ACTACACGTAAAATTTACCATTCTCAAAAAAAGGGACATACCTCATTCATTTGCCAATAG TTGTATAATAATGTCAACTTGCATCTCACAATTTCAAAACTTAATCTTGTACTTTCCTCA TTGTGTTCTTTGAGAACTGCCTGCAAACATAGTCCAAATTCGTAACAAAGGGGTCATTAG CCTTCAAAAATTAGCAAGAAGTTGAATCTAAGCATTTAATTTCTACTTTGAATGAGTAAC AAGCATTCCATAACCACCCAACTCCCTTGACCAGTATCAAATTACTTGTTTAACTGATAT AAACACATGTGGCGCATCTTAGAGTTCGAAATTAAGATCAAGATGAATTACCCTGAAACA AGTGCTCTTCAAGATTTGTTTAGATATATAATTCATCTAGTAGACTTGTTTGGTAAAACA TGCATGATACTCATACCCTCCAACTATCCAATTTTATTCGCTACTACAGCAGGAAAGTGA ATCAATGATGACAAAAGTGCTAAAGTATATTAATTTACAACACTGTCTTGATATGTATTA TATCAACAATACACCAATTAATGAATGTCTAACTATATTTAAGGTCCCAATCCTTGCATT CTTGTTTCTGAGACAATAGCTCTCTTGACAAATTTCATAACATACTTCATAATTTGCAGC CATGAAAGAAACAGGTGCTTGTCAATAAACTACAACCAAACAAGATTTTTTTTTTTTT