Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc09g074120.2.1
CDS Infomation

RING/U-box superfamily protein (AHRD V3.3 *-* AT4G03000.2)
Sequence

ATGTTTGATGATAACATCAGTGATGATGCGGATGAAAAGTCGTTGGCAATTTCAGATAAG
GAAAAAGGAAGTAGGAACAATACGAAGTTTGAATCTAAGATTCCTCTAGGAACTTCTTTT
GATTCACATGGGTCGTCTCTTACGGAGTTTCTAAGATATGATTTATTAGAGAAACCAAGG
AAAGGAGTCACTCTATTTGAGATTGACCCATTGACGAGCGGGTGTCCTCACTATGATGCT
GAACAAGAAGTGGAAACTGCACCAAATATAGATTCGGAGGACATGTCGGCCTGCTGTAGT
TTTGTTTTGGACAAGAAACTGGACTTGTCTTCTTCCGGTTCAACAAAGAAGAGTTCGCAC
CCTAAAATGAAAAATTTGGTTAAATTCAATCAACCTCTAACTAAAGAAAGTTTTGATAGT
CAATGCCTTTCCTCACCCATAGCACCTGCAAGTGACACTTCCAAAGTGCCACCTATTAAA
GATAATATAAATGAAAAGGATATGGATTCATTATCCATGGAGCCTAAGTTCAGCAAAAAA
GTCCCCGACAACACAACTATTTCTTCTGCGGTGCAAGATTATTATGTTGGTATCCCATAT
AATGAGTCTTTGGGTAAATATGTCCCTCGAAATGAGAGAGATGAAAATATATTGTTTCTA
ACTTCTCATTTGAAGACACTACAGGAAGAGCTCCAAAGGTGGTCTGATTGGGCAAATGAG
AAGGTAATGCAGGCTACTCGGAGGCTTGGCAAGGACCAGGCTGATCTTAAAAGGATGAGG
CAAGAAAAAGAAGATGCTGAAAATGTTCACCAGGAAAAGCATATGCTGGAGGAAACCACC
ATGAGGAAGATTATGGAGATGGAGCAAGCGTTTGTAAATACTTATTCCATGGGTAAAACA
ATTAATTCTCTTCTTAACACCTTGGAGATGGATAATGTTGGACTGAAGAAGGATTTGGAA
GCCGTAATGCTCTCTACCGGCAAGCATGATATGAACGTCAATAATGCTTTAGCACAAGAG
CAGGAAGCACTAAAGAAGTGTCAAGCAGCGGACATGGAGAAGCGCTCATTTGAGGAGGAT
TTATTTGCTATCAAGCGGGAAAAAACTTCTTTGCAACATTCGTGTTTTAGAGATCTATTT
AAGCATGAGGAATCGGTGAAACAAAGATTTCAACAACAAGCTGATTGTCTGAAAAATGAA
AGAGAACAACTCCGTGTTAAGGGAAAAGTGCAGCGGCATAATTTTAGAGAGAAGGTAGAG
AGAAACAAGCAAAAGTATAAAGAAGAAATACAAAAGTGTGAGAGTGAAATTTCTCGATTG
AGATTCCAATCTGAAAGATCAATAACAGAGGCACTAAAACGAGGCATTCCTCAATTAACA
AAGGGTTTATCAACCTATGCAGAAAGTTCTGACTCTAATTTTGTAAAGATGGAGAGGGAG
TGTGTTATGTGTATGCATGAACATATATCAGTGGTTTTTCTCCCTTGTGCACATCAAGTT
ATTTGTGAATATTGCAATGTGCTTCACCAAAACAAAGGAATGGACGAATGCCCTTCTTGT
AGGACACCAATTAAGGAGAGAATTAGTGTCCACTTTCCTGATTCCGAAAAGTTAGCAACT
TCAGAATAG

Peptide Sequence

PEP ID

Solyc09g074120.2.1
PEP Infomation

RING/U-box superfamily protein (AHRD V3.3 *-* AT4G03000.2)
Sequence

MFDDNISDDADEKSLAISDKEKGSRNNTKFESKIPLGTSFDSHGSSLTEFLRYDLLEKPR
KGVTLFEIDPLTSGCPHYDAEQEVETAPNIDSEDMSACCSFVLDKKLDLSSSGSTKKSSH
PKMKNLVKFNQPLTKESFDSQCLSSPIAPASDTSKVPPIKDNINEKDMDSLSMEPKFSKK
VPDNTTISSAVQDYYVGIPYNESLGKYVPRNERDENILFLTSHLKTLQEELQRWSDWANE
KVMQATRRLGKDQADLKRMRQEKEDAENVHQEKHMLEETTMRKIMEMEQAFVNTYSMGKT
INSLLNTLEMDNVGLKKDLEAVMLSTGKHDMNVNNALAQEQEALKKCQAADMEKRSFEED
LFAIKREKTSLQHSCFRDLFKHEESVKQRFQQQADCLKNEREQLRVKGKVQRHNFREKVE
RNKQKYKEEIQKCESEISRLRFQSERSITEALKRGIPQLTKGLSTYAESSDSNFVKMERE
CVMCMHEHISVVFLPCAHQVICEYCNVLHQNKGMDECPSCRTPIKERISVHFPDSEKLAT
SE*

Transcript Sequence

Transcript ID

Solyc09g074120.2.1
Transcript Infomation

RING/U-box superfamily protein (AHRD V3.3 *-* AT4G03000.2)
Sequence

ATGTTTGATGATAACATCAGTGATGATGCGGATGAAAAGTCGTTGGCAATTTCAGATAAG
GAAAAAGGAAGTAGGAACAATACGAAGTTTGAATCTAAGATTCCTCTAGGAACTTCTTTT
GATTCACATGGGTCGTCTCTTACGGAGTTTCTAAGATATGATTTATTAGAGAAACCAAGG
AAAGGAGTCACTCTATTTGAGATTGACCCATTGACGAGCGGGTGTCCTCACTATGATGCT
GAACAAGAAGTGGAAACTGCACCAAATATAGATTCGGAGGACATGTCGGCCTGCTGTAGT
TTTGTTTTGGACAAGAAACTGGACTTGTCTTCTTCCGGTTCAACAAAGAAGAGTTCGCAC
CCTAAAATGAAAAATTTGGTTAAATTCAATCAACCTCTAACTAAAGAAAGTTTTGATAGT
CAATGCCTTTCCTCACCCATAGCACCTGCAAGTGACACTTCCAAAGTGCCACCTATTAAA
GATAATATAAATGAAAAGGATATGGATTCATTATCCATGGAGCCTAAGTTCAGCAAAAAA
GTCCCCGACAACACAACTATTTCTTCTGCGGTGCAAGATTATTATGTTGGTATCCCATAT
AATGAGTCTTTGGGTAAATATGTCCCTCGAAATGAGAGAGATGAAAATATATTGTTTCTA
ACTTCTCATTTGAAGACACTACAGGAAGAGCTCCAAAGGTGGTCTGATTGGGCAAATGAG
AAGGTAATGCAGGCTACTCGGAGGCTTGGCAAGGACCAGGCTGATCTTAAAAGGATGAGG
CAAGAAAAAGAAGATGCTGAAAATGTTCACCAGGAAAAGCATATGCTGGAGGAAACCACC
ATGAGGAAGATTATGGAGATGGAGCAAGCGTTTGTAAATACTTATTCCATGGGTAAAACA
ATTAATTCTCTTCTTAACACCTTGGAGATGGATAATGTTGGACTGAAGAAGGATTTGGAA
GCCGTAATGCTCTCTACCGGCAAGCATGATATGAACGTCAATAATGCTTTAGCACAAGAG
CAGGAAGCACTAAAGAAGTGTCAAGCAGCGGACATGGAGAAGCGCTCATTTGAGGAGGAT
TTATTTGCTATCAAGCGGGAAAAAACTTCTTTGCAACATTCGTGTTTTAGAGATCTATTT
AAGCATGAGGAATCGGTGAAACAAAGATTTCAACAACAAGCTGATTGTCTGAAAAATGAA
AGAGAACAACTCCGTGTTAAGGGAAAAGTGCAGCGGCATAATTTTAGAGAGAAGGTAGAG
AGAAACAAGCAAAAGTATAAAGAAGAAATACAAAAGTGTGAGAGTGAAATTTCTCGATTG
AGATTCCAATCTGAAAGATCAATAACAGAGGCACTAAAACGAGGCATTCCTCAATTAACA
AAGGGTTTATCAACCTATGCAGAAAGTTCTGACTCTAATTTTGTAAAGATGGAGAGGGAG
TGTGTTATGTGTATGCATGAACATATATCAGTGGTTTTTCTCCCTTGTGCACATCAAGTT
ATTTGTGAATATTGCAATGTGCTTCACCAAAACAAAGGAATGGACGAATGCCCTTCTTGT
AGGACACCAATTAAGGAGAGAATTAGTGTCCACTTTCCTGATTCCGAAAAGTTAGCAACT
TCAGAATAG