Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g116140.3.1
CDS Infomation

Activating signal cointegrator 1 (AHRD V3.3 *** A0A0B0MCE7_GOSAR)
Sequence

ATGGAATCGTCAGGGCAATGGCTGGAGAAAGCGTTACTGGAGCTATGTGGCAAGATTGAG
AACGGTCTTGATTTAGATGCTGAGATTATTTCTGGGCTTGTTTCTTATTGTGAGCTTGCT
CCTCCTCTAGACGCTAAAGAATATCTTGATAATATCATAGGTCAGGATGCTGGAAAAAGT
GTGACGGGTGAGTATTTGAGACGGAGAGGTCATTCAGATTTATACCAAGGTACTTCTGCT
TCCAAATTGCAAGCATATGTAAAGCCTCCTTCAGGTGATAGTCTGGCAGCTGGAACGAAA
AAACAAGTACGCGCACCAAAAGAAAGTAAAGCCTCAAGTAAGCAGGAAATCCTGAGCACA
GCTGAGACATCAAATGGACGAAACCTACAGAGAGGAAGTCAAGGGAACTCTACAAAAACA
ACTGCACCTCAATCCCAAGCAAGTCAAAAAAACTCTAAAAAGAAAAAATCAGAGAAAGTT
ATTTCTCTTGCTGAGGCTGCAAAAGGTTCCATAATATTTCAACAGGGGAAGCCATGCTTA
TGCCAAGCCCGCCGACACAGGCTGATAAGCAACTGTTTATCTTGTGGGAAGATAGTCTGT
GAACAGGAAGGTGAAGGGCCTTGCAACTTTTGTGGTGCACTTGTGCTGAAGGAGGGAAGC
TCATATGCTGGATTAGATGAAGGTCCAGTTCCAATTTCCGATGCTGAGGAAGCAGCTGAA
GCGTATGCAAAGAGGCTAGTTGACTATGATCGGAACTCTGCAGCACGTACGACTGTTATC
GATGACCAAAGTGACTACTATGAGATTGAGGGAAACAGCTGGTTGTCGAAGGAGGAAAAG
GAAATTCTGAGGAAAAAGAAAGAGGAGATAGAAGAGGCTGAACATGCTAAACGAAATAGA
GTCGTAATGACTTTTGACCTCGTCGGCCGCAAGGTTCTTTTAAATAAAGACGAGGCCGCT
GAAGAACTGCAGAAGGGAATTCTCTTCAGACCAGCAGAGGGGAAGGAAGCAACCCGCATC
AAACCTAACCCAAACCTAAAGGTACAACCTGTCTTTGTGGATCCAGGTCCCAGGAAAACC
CCCAAGGAGAAGAATAATAATAAAGGCCCGAGAAATGGCTTGTGCTTGGAGATTACTGGG
AGAGTGCAACATGATACCAGTGAACACTCACGTTTGATCGTAGAGGGCAAGCTACATGGA
TCTTCAAGTAGCAAAATCGTGGCATGA

Peptide Sequence

PEP ID

Solyc03g116140.3.1
PEP Infomation

Activating signal cointegrator 1 (AHRD V3.3 *** A0A0B0MCE7_GOSAR)
Sequence

MESSGQWLEKALLELCGKIENGLDLDAEIISGLVSYCELAPPLDAKEYLDNIIGQDAGKS
VTGEYLRRRGHSDLYQGTSASKLQAYVKPPSGDSLAAGTKKQVRAPKESKASSKQEILST
AETSNGRNLQRGSQGNSTKTTAPQSQASQKNSKKKKSEKVISLAEAAKGSIIFQQGKPCL
CQARRHRLISNCLSCGKIVCEQEGEGPCNFCGALVLKEGSSYAGLDEGPVPISDAEEAAE
AYAKRLVDYDRNSAARTTVIDDQSDYYEIEGNSWLSKEEKEILRKKKEEIEEAEHAKRNR
VVMTFDLVGRKVLLNKDEAAEELQKGILFRPAEGKEATRIKPNPNLKVQPVFVDPGPRKT
PKEKNNNKGPRNGLCLEITGRVQHDTSEHSRLIVEGKLHGSSSSKIVA*

Transcript Sequence

Transcript ID

Solyc03g116140.3.1
Transcript Infomation

Activating signal cointegrator 1 (AHRD V3.3 *** A0A0B0MCE7_GOSAR)
Sequence

ATCACATGTATATTTCTTCTTAAAAGTAATACTTTAGATAATGCAGTTAACGATAAATTG
TGTTTCCCAAAATTAGGGGGCTAAAGTGCGTACGATCCAAACTCAAAGGTGTAGCCAAAA
ATGGGGTAGCCTATATAAGGCAGGCGGTTGAGAGGCAAGAAGACAGAAAAAGAGAAATGG
AATCGTCAGGGCAATGGCTGGAGAAAGCGTTACTGGAGCTATGTGGCAAGATTGAGAACG
GTCTTGATTTAGATGCTGAGATTATTTCTGGGCTTGTTTCTTATTGTGAGCTTGCTCCTC
CTCTAGACGCTAAAGAATATCTTGATAATATCATAGGTCAGGATGCTGGAAAAAGTGTGA
CGGGTGAGTATTTGAGACGGAGAGGTCATTCAGATTTATACCAAGGTACTTCTGCTTCCA
AATTGCAAGCATATGTAAAGCCTCCTTCAGGTGATAGTCTGGCAGCTGGAACGAAAAAAC
AAGTACGCGCACCAAAAGAAAGTAAAGCCTCAAGTAAGCAGGAAATCCTGAGCACAGCTG
AGACATCAAATGGACGAAACCTACAGAGAGGAAGTCAAGGGAACTCTACAAAAACAACTG
CACCTCAATCCCAAGCAAGTCAAAAAAACTCTAAAAAGAAAAAATCAGAGAAAGTTATTT
CTCTTGCTGAGGCTGCAAAAGGTTCCATAATATTTCAACAGGGGAAGCCATGCTTATGCC
AAGCCCGCCGACACAGGCTGATAAGCAACTGTTTATCTTGTGGGAAGATAGTCTGTGAAC
AGGAAGGTGAAGGGCCTTGCAACTTTTGTGGTGCACTTGTGCTGAAGGAGGGAAGCTCAT
ATGCTGGATTAGATGAAGGTCCAGTTCCAATTTCCGATGCTGAGGAAGCAGCTGAAGCGT
ATGCAAAGAGGCTAGTTGACTATGATCGGAACTCTGCAGCACGTACGACTGTTATCGATG
ACCAAAGTGACTACTATGAGATTGAGGGAAACAGCTGGTTGTCGAAGGAGGAAAAGGAAA
TTCTGAGGAAAAAGAAAGAGGAGATAGAAGAGGCTGAACATGCTAAACGAAATAGAGTCG
TAATGACTTTTGACCTCGTCGGCCGCAAGGTTCTTTTAAATAAAGACGAGGCCGCTGAAG
AACTGCAGAAGGGAATTCTCTTCAGACCAGCAGAGGGGAAGGAAGCAACCCGCATCAAAC
CTAACCCAAACCTAAAGGTACAACCTGTCTTTGTGGATCCAGGTCCCAGGAAAACCCCCA
AGGAGAAGAATAATAATAAAGGCCCGAGAAATGGCTTGTGCTTGGAGATTACTGGGAGAG
TGCAACATGATACCAGTGAACACTCACGTTTGATCGTAGAGGGCAAGCTACATGGATCTT
CAAGTAGCAAAATCGTGGCATGAGCCATCTATTAATAGTACAGTCGGAACTTCAGATGAC
TCTTAAGTGTACCTTTGATTACTATTGAGAAGTCTATAGCTTGACCAATTGAGTACTCAC
ACCTCCAAACATGTCATCTTTCTGGGGTAGTGTAGAAACTTACTCTTATAAACTTGCTAT
TTTAAGTTCTGATTTATCAAGAAAACAATTCTCTGCAAATATTTGTTTGGAGTGGGAATG
AACTTGGTTGTCATCTTTGTTCGATGTTCATCCTTCGCCCTGTAGGCGGACGCCCTGCAT
GAACTGAGAAAATGTGTGCAAGAAAATTGCATCTTT