Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc02g078500.2.1
CDS Infomation

Stem-specific protein TSJT1, putative (AHRD V3.3 *** B9RZ68_RICCO)
Sequence

ATGTTGGCAATTTTCAAGAAAAGTGTGGTTGATCCACCAATGGAGCTGCAGAGCCCAGCC
TCTTTGCAATCATCAAACAAGGCTGTTTCCCCTGAAGAGACTATGAAGAATTTCTTAGCT
TCAAATACCAACAATGGGTTTTCTATTGGATTCATGGACAAGGCATTCTTGGCCTATTCC
AAACCTCCATCCTCATCAAATGCTCAACAAAGGTTGTTCTGTGGGTTGAATGACATATAC
TGCATTTTCTTGGGAAGCTTGAATAACTTATGGGCACTAAACAAGCAGTATGGTCTGTCA
AAGGGTACCAATGAGGCCATGCTTGTGAGTGAAGCATATCGTACCCTTCGTGACAGAGGT
CCATTCCCAGCTCATGAGGTTCTCAAGGGACTTGAGGGTAGCTATGGCTTTGTGATCTAT
GATCATAAGGCTGGTAATGTCTTTGTTGCCCTTGGTGCTGATGAAACTGCAAAGATGTTC
TGGGGAATAGCATCTGATGGATCTGTCATGATCTCTGATAATGTGGATCATATCAAAGGA
AGCTGTCTCAAATCATTTGCTCCCTTCCCAACCGGGTGCATGTACCACAGTGAAAGTGGA
TTGAAGAGCTTTGAGCATCCAAGTTTCAAGATGAAAGCAATGCCAAGAGTGGATAGTGAA
GGAGCCATGTGTGGAGCTTGCTTCAAAGTTGATGTCTACTCCAAGGTGAATAGCATGCCA
AGAGTTGGAAGTTCTGCCAACTGGGCTAATTGGGGCCAGCAGGCTTAG

Peptide Sequence

PEP ID

Solyc02g078500.2.1
PEP Infomation

Stem-specific protein TSJT1, putative (AHRD V3.3 *** B9RZ68_RICCO)
Sequence

MLAIFKKSVVDPPMELQSPASLQSSNKAVSPEETMKNFLASNTNNGFSIGFMDKAFLAYS
KPPSSSNAQQRLFCGLNDIYCIFLGSLNNLWALNKQYGLSKGTNEAMLVSEAYRTLRDRG
PFPAHEVLKGLEGSYGFVIYDHKAGNVFVALGADETAKMFWGIASDGSVMISDNVDHIKG
SCLKSFAPFPTGCMYHSESGLKSFEHPSFKMKAMPRVDSEGAMCGACFKVDVYSKVNSMP
RVGSSANWANWGQQA*

Transcript Sequence

Transcript ID

Solyc02g078500.2.1
Transcript Infomation

Stem-specific protein TSJT1, putative (AHRD V3.3 *** B9RZ68_RICCO)
Sequence

ATTATTAATGGATAATGTTTGACACTTTTTGTCTCCTCCAACCCTCTTAGCTATAAATAC
TCATCTAATCACTTATCATTTCTTACATTTTGTACCAAAGTTTATCACCTTGTTTGTGCT
TTCTCACTAATTTACTTTTTCATAGATTTTGTTTGAGAAGAAAGAAAATGTTGGCAATTT
TCAAGAAAAGTGTGGTTGATCCACCAATGGAGCTGCAGAGCCCAGCCTCTTTGCAATCAT
CAAACAAGGCTGTTTCCCCTGAAGAGACTATGAAGAATTTCTTAGCTTCAAATACCAACA
ATGGGTTTTCTATTGGATTCATGGACAAGGCATTCTTGGCCTATTCCAAACCTCCATCCT
CATCAAATGCTCAACAAAGGTTGTTCTGTGGGTTGAATGACATATACTGCATTTTCTTGG
GAAGCTTGAATAACTTATGGGCACTAAACAAGCAGTATGGTCTGTCAAAGGGTACCAATG
AGGCCATGCTTGTGAGTGAAGCATATCGTACCCTTCGTGACAGAGGTCCATTCCCAGCTC
ATGAGGTTCTCAAGGGACTTGAGGGTAGCTATGGCTTTGTGATCTATGATCATAAGGCTG
GTAATGTCTTTGTTGCCCTTGGTGCTGATGAAACTGCAAAGATGTTCTGGGGAATAGCAT
CTGATGGATCTGTCATGATCTCTGATAATGTGGATCATATCAAAGGAAGCTGTCTCAAAT
CATTTGCTCCCTTCCCAACCGGGTGCATGTACCACAGTGAAAGTGGATTGAAGAGCTTTG
AGCATCCAAGTTTCAAGATGAAAGCAATGCCAAGAGTGGATAGTGAAGGAGCCATGTGTG
GAGCTTGCTTCAAAGTTGATGTCTACTCCAAGGTGAATAGCATGCCAAGAGTTGGAAGTT
CTGCCAACTGGGCTAATTGGGGCCAGCAGGCTTAGGTTCATTTGGACCTCACTTTAACTA
ACTACAATATAAAGAAGAAAAGAAAAAACTTACAAAGGAGGACGCAGAGAAAGCTGAGCA
GGTCATCTCATCTTTGTCACCAGATGAGTTGGAAAGAATGGTGAGATGGGCAGCAAGGAT
TCAAACAGGAATACAAGTTCTCAAGATTACCAAAGATTTTGTCATGGCAAATCCTGGCAT
GAGCTTGGCACTTTTTGTGCCCATTTTTGCAGTCTTCCTTCACCTGTTTGGCTACATCTG
AGCTTTTTCTGTTCTTTTATATTTTCTTGTCATGTTAGGAAAATTCATTCATTTTTTCTT
ATAAGTTAATAAAATTCTATACAGAACAG