Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc01g006710.3.1
CDS Infomation	ATP-dependent RNA helicase, putative (AHRD V3.3 *** B9RL32_RICCO)
Sequence	ATGCATTCGAGAGTAGGGTTTCTCTTAGCATGCACAAAAAGGAGGTCTTCTTCGTCTACG TTTCTTCTATCTACTGTGTTCTCTTCTCATCAAAATCGGAAGATATTTGTTGCTTGTCAC CGTCGGATTTTGATTGGTAGTGATATAAGTAAGATTTATTTCTTCGAAGAATCGAATTTT CGTGGATTGGGACAGCTGCGTGGGTTTTGCAGATACCCTGGTATAGCAGCTTTAGAGCAA TTCTCCGATGATGAGTATGAATGCGACTACGAAAATCATCCGGCTTCGTCATCAGTGGCC AATGTAGATGAGTGGAAATGGAAACTTAGCCTGCTGTTGCGCAATGAGAAGGATCATGAA ATTGTATCCAGAGATAAACGGGATAGAAGAGACTATGAACAGATATCCAACCTTGCTAAA AGGATGGTGGTGAGCAAGGTTCCTCTTCCAAATTACAGACCTGATCTTGATGATAAGCGG CCTCAAAGAGAGGTAGTAATCCCACTAAGTCTGCAAAGGAGAGTAGAAGGCTTGCTTCAA GAACATATTGATAGAACACAACTCAGCAGTGGAAAAGATGACAACATTTTAGATGGTACT AAGTCCTCTGATATAGTCACAGATGCTAATATGGATGAAAATCCAGATTCATTCTTAGAT GGCTCTGTCATGGAGAAGGTTCTTCAGAGGCGGAGCTTACGCATGCGTAATATGCAGAGG GGTTGGCAGGAATCTCCTGATGGCAACAAAATGCTAGAATTCCGGAAATCTCTTCCTGCA TTTAAGGAAAAAGAAAGGCTGCTCCAAGCAATTGCACGTAATCAGGTGGTAGTAATTTCT GGCGAGACAGGATGTGGTAAGACCACTCAACTGCCACAGTACATTCTAGAGTCAGAGATA GAATCTGGCCGTGGAGCATTTTGTAGCATAATTTGTACGCAACCTCGAAGAATATCTGCT TTGGCTGTTGCAGAAAGAGTGGCTACAGAAAGGGGAGAACCTCTTGGTGACTCAGTTGGT TATAAAGTGCGATTAGAAGGGGTGAAAGGAAAAAATACACATTTGCTATTTTGTACGAGT GGTATTTTGCTTCGTCGTCTTCTCAGTGACCGCAATCTTGACGGTATAACCCATGTTTTT GTTGATGAAATTCATGAGCGAGGCATGAACGAAGATTTCCTGTTGATTGTGTTGAAGGAT CTTCTTCCACGACGCCCAGATTTGAGATTGATTTTGATGAGTGCTACTCTTAATGCTGAA TTATTTTCCAGTTACTTTGGAGGAGCGCCTATGATTCACATCCCAGGCTTCACATATCCT GTAAGAGCAAACTTTCTGGAAGATGTGCTGGAAATTACGGGATATAAGTTGACTTCATTC AACCAAATTGATGATTATGGCCAGGAGAAGATGTGGAAAACACAAAAACAGTTAGCACCC CGCAAAAAAAAAAATCAGATAACTGCTCTTGTTGAGGATGCTGTAGAAAAATCAAACTTC GAGAATTATAGTCCAAGGGCACGTGATTCACTAGCATGCTGGGCTCCTGATTGTATTGGA TTCAATCTTATTGAGGCAGTTTTGTGCCATATATGTCGGAAAGAACGTCCAGGCGCTGTA CTAGTATTTATGACTGGTTGGGAAGATATTAGTTGTTTAAGAGATCAACTTAAAGCACAT CCTCTCTTGGGTGACCCAAATAGAGTGTTGGTGCTCACTTGTCATGGTTCTATGGCTACC TCTGAGCAGAAACTCATATTTGAAAAGCCACCTCAGAATGTACGTAAAATAGTACTTGCA ACAAATATGGCCGAGGCAAGTATTACTATAAATGATGTGGTCTTTGTGGTGGACTGTGGA AAAGCGAAGGAAACGACTTATGATGCTCTAAATAATACTCCGTGCTTATTACCTTCATGG ATTTCACAAGCCTCTGCACGACAAAGAAGGGGTAGGGCTGGCCGTGTCCAACCAGGCGAG TGCTACCACTTGTATCCACGATGTGTGTATGAAGCTTTTGCTGAATACCAACTACCTGAA CTCCTGAGAACTCCTTTAAATTCTCTTTGCTTGCAAATAAAGAGTTTGCAGGTTGGAAGT ATTGCTGGATTCCTTTCGTCTGCGCTTCAGCCTCCAGAATCATTGGCTGTGCAAAATGCT ATTCAGTTTTTGAAGATGATTGGTGCATTAGATGAAAATGAGAATCTTACACATCTAGGC AAATTTTTAGCAATCCTCCCTGTGGATCCCAAGCTTGGGAAAATGCTCATTATGGGTACT ATTTTCCGTTGCTTTGATCCTGTTTTGACTATTGTGGCTGGTCTTAGTGTACGGGATCCA TTTCTGTTGCCTCAAGATAAAAAAGATTTAGCGGGAACAGCAAAGTCCAGATTCTCAGCC AAGGACTATAGTGACCATATGGCGCTTGTCCGTGCATATGAAGGATGGAAAGATGCTGAA AGGGAAGGTTCTGCCTATGAATATTGCTGGAGGAATTTCCTCTCTGCCCAGACTCTTCAA GCTATCCATTCTCTTAGAAAGCAATTTATCTTCATCTTGAAAGATGCTGGATTGCTTGAT GCTGATACTGCAACTAACAATAAGCTAAGTTACAATCAGTCTTTGGTTCGTGCTGTCATA TGTTCTGGATTGTATCCTGGAATTTCTTCAGTGGTGAATAGAGAGACATCAATGTCCTTC AAGACTATGGATGATGGACAAGTCTTTCTATATACAAATTCGGTCAATGCTCGCTATCAA ACGATTCCATACCCTTGGCTGGTGTTCAGTGAAAAAGTTAAGGTCAATACAGTCTTCATA CGGGATTCTACTGGAGTATCTGATTCGATTGTGATCCTATTTGGTAGTACTCTAGACTGT GGAGATGTGGCTGGGCATTTAAAGATGTTAGGTGGATACATAGAGTTCTTCATGGATCCT TCTCTGGCGGATTGCTACATAAAGCTCAAAGAGGAGCTCGATATACTTTTGCAAAAGAAG CTTCAAGATCCTGAGGTAGACATCCACAAGGAAGGCAAATACCTTATGCTTGCTGTTCAG GAACTGGTTTCAGGAGATCAGTCTGAGGGCAGGTTTGTGTTTGGTCGTGAAAACAAGAAG CCTAAAGATTCTGACGCTGATAGATTTACAAGGGACGGGACAAACCCAAAGAGTTTGTTG CAGACGCTACTTATGAGGGCGGGTCACTCCCCTCCCAAGTACAAAACAAAGCATCTAAAA ACAAATGAATTTAGGGCACTTGCAGAGTTCAAGGGAATGCAATTTGTAGGTAAACCAAAG AGAAACAAAGCCCTTGCAGAAAAGGATGCTGCAATAGAAGCACTAGCATGGTTAACTCAA ACATCTGACAAGAATCATGGTGAAGATGATAAATCTCCTCCTGATGTCACCGATAACATG CTGAAGCTTCTTGGTAAACGCAGGAGATCAAAGCGTCGCTGA

Peptide Sequence

PEP ID	Solyc01g006710.3.1
PEP Infomation	ATP-dependent RNA helicase, putative (AHRD V3.3 *** B9RL32_RICCO)
Sequence	MHSRVGFLLACTKRRSSSSTFLLSTVFSSHQNRKIFVACHRRILIGSDISKIYFFEESNF RGLGQLRGFCRYPGIAALEQFSDDEYECDYENHPASSSVANVDEWKWKLSLLLRNEKDHE IVSRDKRDRRDYEQISNLAKRMVVSKVPLPNYRPDLDDKRPQREVVIPLSLQRRVEGLLQ EHIDRTQLSSGKDDNILDGTKSSDIVTDANMDENPDSFLDGSVMEKVLQRRSLRMRNMQR GWQESPDGNKMLEFRKSLPAFKEKERLLQAIARNQVVVISGETGCGKTTQLPQYILESEI ESGRGAFCSIICTQPRRISALAVAERVATERGEPLGDSVGYKVRLEGVKGKNTHLLFCTS GILLRRLLSDRNLDGITHVFVDEIHERGMNEDFLLIVLKDLLPRRPDLRLILMSATLNAE LFSSYFGGAPMIHIPGFTYPVRANFLEDVLEITGYKLTSFNQIDDYGQEKMWKTQKQLAP RKKKNQITALVEDAVEKSNFENYSPRARDSLACWAPDCIGFNLIEAVLCHICRKERPGAV LVFMTGWEDISCLRDQLKAHPLLGDPNRVLVLTCHGSMATSEQKLIFEKPPQNVRKIVLA TNMAEASITINDVVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRVQPGE CYHLYPRCVYEAFAEYQLPELLRTPLNSLCLQIKSLQVGSIAGFLSSALQPPESLAVQNA IQFLKMIGALDENENLTHLGKFLAILPVDPKLGKMLIMGTIFRCFDPVLTIVAGLSVRDP FLLPQDKKDLAGTAKSRFSAKDYSDHMALVRAYEGWKDAEREGSAYEYCWRNFLSAQTLQ AIHSLRKQFIFILKDAGLLDADTATNNKLSYNQSLVRAVICSGLYPGISSVVNRETSMSF KTMDDGQVFLYTNSVNARYQTIPYPWLVFSEKVKVNTVFIRDSTGVSDSIVILFGSTLDC GDVAGHLKMLGGYIEFFMDPSLADCYIKLKEELDILLQKKLQDPEVDIHKEGKYLMLAVQ ELVSGDQSEGRFVFGRENKKPKDSDADRFTRDGTNPKSLLQTLLMRAGHSPPKYKTKHLK TNEFRALAEFKGMQFVGKPKRNKALAEKDAAIEALAWLTQTSDKNHGEDDKSPPDVTDNM LKLLGKRRRSKRR*

Transcript Sequence

Transcript ID	Solyc01g006710.3.1
Transcript Infomation	ATP-dependent RNA helicase, putative (AHRD V3.3 *** B9RL32_RICCO)
Sequence	GCAAATACAACCAAAACAAATTGTTCAAAAACCTAACAACCTAAATATTCGAATCATCTA TTGCCCTCGATAGCATTAAGAGTGAATCGACGGCACCGGTAGAGGCTGAGACACGGCGGA GTGATACCTCCGGTAGGGGGGAAGAGGAATGGTGAAAGAGGGAAAATGAAATTGGAAATA AGGGATTTGGGGGATTTGAAGATTTTCAATTTCCCTCGCAACTGTTTCGGGTTAACGGGT ACCGGGTCGGGTATGAGACACTAAATTCAAAATGTTTATATTTTTAATTGCCACGTCATC CAAATGAGTCGGAGACTCGTAGTACATCGATGAAATTATTTTATTCTTAATCAGAAGCTG TAGATACAATATTTGATTTGAGCATACCACCTATAGTTTGTACTTCAAGTGTAATCATAC TGACGATGAAATTGCTACATCATTCAAATGGATCGTAGAGACATATACTCGTAGTGCATT GATGAAATTATTTCATTCTAAATAAGAAGTTTAGATTCGATAGTTGATCTTTTTTTAAAA TAGTGACAATGAAATTGCCATGTCATCCAAACGTGTCGTAGACTCTAATAGTACAGTCAT AAAAATCATTTTATTCTTAATAAAAAATCTTAGATTCAAAGTTGATTTGAACATACCATA AAATTTATATTTATGTGGGTCATTATTTTCATATTTTGCATTTCATTTTTTTTATTTTAG AGAAAAAAGTTTGAAATACCATCAAATTTTGATCAAATTTGCTATTAATTAGGATATCAT ATTTTACGAAGTATTAAATTTGATATCGTAATAGCAATTTCGATTAAAGTTCGAATTTCA CGTATTATAAGTTTGAATTTATTTGTTTTGGCTACCATATAATATTATACCGGTCCGCTA CTCTACTACTGTGAATTTACCGGCGCCGCTGCTGCTCCACCGGAACCGTTTTTCCGCCGC CGTCATCAAAGCTACCATTTTTTCCGGGGAAAACTATCGCTTTCTTTAATCAAGGTTGAA GAAGAAAAAATTTGAAGCACAGCTATGATCACAGTAATCATTTTATCAAACACATAGAAT GCATTCGAGAGTAGGGTTTCTCTTAGCATGCACAAAAAGGAGGTCTTCTTCGTCTACGTT TCTTCTATCTACTGTGTTCTCTTCTCATCAAAATCGGAAGATATTTGTTGCTTGTCACCG TCGGATTTTGATTGGTAGTGATATAAGTAAGATTTATTTCTTCGAAGAATCGAATTTTCG TGGATTGGGACAGCTGCGTGGGTTTTGCAGATACCCTGGTATAGCAGCTTTAGAGCAATT CTCCGATGATGAGTATGAATGCGACTACGAAAATCATCCGGCTTCGTCATCAGTGGCCAA TGTAGATGAGTGGAAATGGAAACTTAGCCTGCTGTTGCGCAATGAGAAGGATCATGAAAT TGTATCCAGAGATAAACGGGATAGAAGAGACTATGAACAGATATCCAACCTTGCTAAAAG GATGGTGGTGAGCAAGGTTCCTCTTCCAAATTACAGACCTGATCTTGATGATAAGCGGCC TCAAAGAGAGGTAGTAATCCCACTAAGTCTGCAAAGGAGAGTAGAAGGCTTGCTTCAAGA ACATATTGATAGAACACAACTCAGCAGTGGAAAAGATGACAACATTTTAGATGGTACTAA GTCCTCTGATATAGTCACAGATGCTAATATGGATGAAAATCCAGATTCATTCTTAGATGG CTCTGTCATGGAGAAGGTTCTTCAGAGGCGGAGCTTACGCATGCGTAATATGCAGAGGGG TTGGCAGGAATCTCCTGATGGCAACAAAATGCTAGAATTCCGGAAATCTCTTCCTGCATT TAAGGAAAAAGAAAGGCTGCTCCAAGCAATTGCACGTAATCAGGTGGTAGTAATTTCTGG CGAGACAGGATGTGGTAAGACCACTCAACTGCCACAGTACATTCTAGAGTCAGAGATAGA ATCTGGCCGTGGAGCATTTTGTAGCATAATTTGTACGCAACCTCGAAGAATATCTGCTTT GGCTGTTGCAGAAAGAGTGGCTACAGAAAGGGGAGAACCTCTTGGTGACTCAGTTGGTTA TAAAGTGCGATTAGAAGGGGTGAAAGGAAAAAATACACATTTGCTATTTTGTACGAGTGG TATTTTGCTTCGTCGTCTTCTCAGTGACCGCAATCTTGACGGTATAACCCATGTTTTTGT TGATGAAATTCATGAGCGAGGCATGAACGAAGATTTCCTGTTGATTGTGTTGAAGGATCT TCTTCCACGACGCCCAGATTTGAGATTGATTTTGATGAGTGCTACTCTTAATGCTGAATT ATTTTCCAGTTACTTTGGAGGAGCGCCTATGATTCACATCCCAGGCTTCACATATCCTGT AAGAGCAAACTTTCTGGAAGATGTGCTGGAAATTACGGGATATAAGTTGACTTCATTCAA CCAAATTGATGATTATGGCCAGGAGAAGATGTGGAAAACACAAAAACAGTTAGCACCCCG CAAAAAAAAAAATCAGATAACTGCTCTTGTTGAGGATGCTGTAGAAAAATCAAACTTCGA GAATTATAGTCCAAGGGCACGTGATTCACTAGCATGCTGGGCTCCTGATTGTATTGGATT CAATCTTATTGAGGCAGTTTTGTGCCATATATGTCGGAAAGAACGTCCAGGCGCTGTACT AGTATTTATGACTGGTTGGGAAGATATTAGTTGTTTAAGAGATCAACTTAAAGCACATCC TCTCTTGGGTGACCCAAATAGAGTGTTGGTGCTCACTTGTCATGGTTCTATGGCTACCTC TGAGCAGAAACTCATATTTGAAAAGCCACCTCAGAATGTACGTAAAATAGTACTTGCAAC AAATATGGCCGAGGCAAGTATTACTATAAATGATGTGGTCTTTGTGGTGGACTGTGGAAA AGCGAAGGAAACGACTTATGATGCTCTAAATAATACTCCGTGCTTATTACCTTCATGGAT TTCACAAGCCTCTGCACGACAAAGAAGGGGTAGGGCTGGCCGTGTCCAACCAGGCGAGTG CTACCACTTGTATCCACGATGTGTGTATGAAGCTTTTGCTGAATACCAACTACCTGAACT CCTGAGAACTCCTTTAAATTCTCTTTGCTTGCAAATAAAGAGTTTGCAGGTTGGAAGTAT TGCTGGATTCCTTTCGTCTGCGCTTCAGCCTCCAGAATCATTGGCTGTGCAAAATGCTAT TCAGTTTTTGAAGATGATTGGTGCATTAGATGAAAATGAGAATCTTACACATCTAGGCAA ATTTTTAGCAATCCTCCCTGTGGATCCCAAGCTTGGGAAAATGCTCATTATGGGTACTAT TTTCCGTTGCTTTGATCCTGTTTTGACTATTGTGGCTGGTCTTAGTGTACGGGATCCATT TCTGTTGCCTCAAGATAAAAAAGATTTAGCGGGAACAGCAAAGTCCAGATTCTCAGCCAA GGACTATAGTGACCATATGGCGCTTGTCCGTGCATATGAAGGATGGAAAGATGCTGAAAG GGAAGGTTCTGCCTATGAATATTGCTGGAGGAATTTCCTCTCTGCCCAGACTCTTCAAGC TATCCATTCTCTTAGAAAGCAATTTATCTTCATCTTGAAAGATGCTGGATTGCTTGATGC TGATACTGCAACTAACAATAAGCTAAGTTACAATCAGTCTTTGGTTCGTGCTGTCATATG TTCTGGATTGTATCCTGGAATTTCTTCAGTGGTGAATAGAGAGACATCAATGTCCTTCAA GACTATGGATGATGGACAAGTCTTTCTATATACAAATTCGGTCAATGCTCGCTATCAAAC GATTCCATACCCTTGGCTGGTGTTCAGTGAAAAAGTTAAGGTCAATACAGTCTTCATACG GGATTCTACTGGAGTATCTGATTCGATTGTGATCCTATTTGGTAGTACTCTAGACTGTGG AGATGTGGCTGGGCATTTAAAGATGTTAGGTGGATACATAGAGTTCTTCATGGATCCTTC TCTGGCGGATTGCTACATAAAGCTCAAAGAGGAGCTCGATATACTTTTGCAAAAGAAGCT TCAAGATCCTGAGGTAGACATCCACAAGGAAGGCAAATACCTTATGCTTGCTGTTCAGGA ACTGGTTTCAGGAGATCAGTCTGAGGGCAGGTTTGTGTTTGGTCGTGAAAACAAGAAGCC TAAAGATTCTGACGCTGATAGATTTACAAGGGACGGGACAAACCCAAAGAGTTTGTTGCA GACGCTACTTATGAGGGCGGGTCACTCCCCTCCCAAGTACAAAACAAAGCATCTAAAAAC AAATGAATTTAGGGCACTTGCAGAGTTCAAGGGAATGCAATTTGTAGGTAAACCAAAGAG AAACAAAGCCCTTGCAGAAAAGGATGCTGCAATAGAAGCACTAGCATGGTTAACTCAAAC ATCTGACAAGAATCATGGTGAAGATGATAAATCTCCTCCTGATGTCACCGATAACATGCT GAAGCTTCTTGGTAAACGCAGGAGATCAAAGCGTCGCTGAGGTGATAAGACTAATTGATT GTAGGCATAATACATAAATATGCCCTTTAACTTGGCTTCGAATTACATTTATGACCTTC