Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre01.g027800.t1.2
CDS Infomation

pacid=30788528 polypeptide=Cre01.g027800.t1.2 locus=Cre01.g027800 ID=Cre01.g027800.t1.2.v5.5 annot-version=v5.6
Sequence

ATGTCCTACACCTATCTGAACGACGATGGCTCCCCAGAGACAGTTAAGACGTGGTCAGAT
ATCCTGGCGAGGGAAATTCCCTGGGAGACCTACGCCACAGCGAGGCTGGTCACCGATAAG
GACCTGCAGCTCATCCGCCGCTATGACAAGCGGTCTTCTGAGCTAAAGAACTCCATGCTG
GATGAGTCGGGGCCGGCCTATGTGGAGGCCTTCATGACCGTGCTGAAGAATGTGACGAAG
CCGGAGACCGTGCAGTACGTGCTGGCAGTGCTCATCCAAATGCTGCAGGAGAACCCCAGC
CGCGCTCGCCTGTTCCACCAGCAGAGCGACCAGCACCTGTCCTCGCAGCCGGACCCCTAC
ACCGTGCTGGAGAGGCTGCTGCAGCGCCAGGACGACTGGTGGTCGCAGGATAAGGCCTGC
AAGCTGCTAACTATCGTGATTGAGAGCCGGCCGCGCAAGGCGACCGGCGCAGAGGGGGAC
CCGGCCGAGACGCACATCAGCCTGTTCCTGGACTGGCTGGTGAGCCAGCTCAACAGCCGC
GCCAACCTGGCTAAGAACCCGCCCGCCGTCATCAACACCTGCATCAGCTGCCTGGCGGCG
CTGCTGAAGGAACGCGCCACGCGGCAGCTGCTGCTGCGCGCGGGCGGCCTGCAGGTGCTG
CCGGCCGTTATCCAGCGCGCTCGCGAGACGCCCAGCGGCTCCCAGCTGCTGTACGAGACC
TGCCTGTGCGTGTGGCAGATGACCTACCTGCGCCAGGCGGCGGAGGTGATGGGCCAGGTG
GGCATCATCAAGCAGCTGGTGGAGGTGTGCCGTGTGGCGCAGAAGGAGAAGGTGTTCCGC
ATGGCGCTGGCGGCGCTGCGCAACCTGCTGGGGTACCAGGACCTGGGCCTGGCCTCGGAC
ATGGTGGAGGCGGGCCTCAACAAGGTGGTGGTCACCCGCCAGATGCAGTCGTGGGGCGAC
GAGGACGTGGTGGAGATGCTGACGTACGTGGACGAGAAGCTGAAGGAGGGCATCGTGTTC
CTCTCAAACTTTGACAAGTACAAGAAGGAGGTGCTGTCCAACACGCTGGACTGGAGCCCC
ATGCACACCAGCGACCTGTTCTGGCGCCAGAACGCGGAGAAGTTCGAGGAGCGCGACTTC
CAGGTGCTGCGCGTGCTGCTCAAGATCATCGAGACCAACCGCGACGTCAAGACGTTGGCG
GTGGGCTGCCACGACCTAGGCCAGTTCATCGTGTACCACCCCCAGGGCCGCTACATCGTG
AACGACCTGCGCGGCAAGGAGCTGGTGATGCGGCTGCTGGGCCACAGCGACGTGGAGGTG
CAGAAGCAGGCGCTGCTGTGCGTGCAGAAGCTCATGCTGAGCAAGGACAAGCTGGACTTC
ATCAAGTCGTAG

Peptide Sequence

PEP ID

Cre01.g027800.t1.2
PEP Infomation

pacid=30788528 transcript=Cre01.g027800.t1.2 locus=Cre01.g027800 ID=Cre01.g027800.t1.2.v5.5 annot-version=v5.6
Sequence

MSYTYLNDDGSPETVKTWSDILAREIPWETYATARLVTDKDLQLIRRYDKRSSELKNSML
DESGPAYVEAFMTVLKNVTKPETVQYVLAVLIQMLQENPSRARLFHQQSDQHLSSQPDPY
TVLERLLQRQDDWWSQDKACKLLTIVIESRPRKATGAEGDPAETHISLFLDWLVSQLNSR
ANLAKNPPAVINTCISCLAALLKERATRQLLLRAGGLQVLPAVIQRARETPSGSQLLYET
CLCVWQMTYLRQAAEVMGQVGIIKQLVEVCRVAQKEKVFRMALAALRNLLGYQDLGLASD
MVEAGLNKVVVTRQMQSWGDEDVVEMLTYVDEKLKEGIVFLSNFDKYKKEVLSNTLDWSP
MHTSDLFWRQNAEKFEERDFQVLRVLLKIIETNRDVKTLAVGCHDLGQFIVYHPQGRYIV
NDLRGKELVMRLLGHSDVEVQKQALLCVQKLMLSKDKLDFIKS*

Transcript Sequence

Transcript ID

Cre01.g027800.t1.2
Transcript Infomation

pacid=30788528 locus=Cre01.g027800 annot-version=v5.6
Sequence

TTTGTTTGAGGCTCGGCGTTTACTAGCGTGTATGATGTTTTGAATCTGCAAGGATTATTC
ATTGGAATAGGCCTTTGACGAAGCAAAACAAGGACGGGCCAGCAGGGCCCTTGCCAAAAT
GTCCTACACCTATCTGAACGACGATGGCTCCCCAGAGACAGTTAAGACGTGGTCAGATAT
CCTGGCGAGGGAAATTCCCTGGGAGACCTACGCCACAGCGAGGCTGGTCACCGATAAGGA
CCTGCAGCTCATCCGCCGCTATGACAAGCGGTCTTCTGAGCTAAAGAACTCCATGCTGGA
TGAGTCGGGGCCGGCCTATGTGGAGGCCTTCATGACCGTGCTGAAGAATGTGACGAAGCC
GGAGACCGTGCAGTACGTGCTGGCAGTGCTCATCCAAATGCTGCAGGAGAACCCCAGCCG
CGCTCGCCTGTTCCACCAGCAGAGCGACCAGCACCTGTCCTCGCAGCCGGACCCCTACAC
CGTGCTGGAGAGGCTGCTGCAGCGCCAGGACGACTGGTGGTCGCAGGATAAGGCCTGCAA
GCTGCTAACTATCGTGATTGAGAGCCGGCCGCGCAAGGCGACCGGCGCAGAGGGGGACCC
GGCCGAGACGCACATCAGCCTGTTCCTGGACTGGCTGGTGAGCCAGCTCAACAGCCGCGC
CAACCTGGCTAAGAACCCGCCCGCCGTCATCAACACCTGCATCAGCTGCCTGGCGGCGCT
GCTGAAGGAACGCGCCACGCGGCAGCTGCTGCTgcgcgcgggcggcctgcagGTGCTGCC
GGCCGTTATCCAGCGCGCTCGCGAGACGCCCAGCGGCTCCCAGCTGCTGTACGAGACCTG
CCTGTGCGTGTGGCAGATGACCTACCTGCGCCAGGCGGCGGAGGTGATGGGCCAGGTGGG
CATCATCAAGCAGCTGGTGGAGGTGTGCCGTGTGGCGCAGAAGGAGAAGGTGTTCCGCAT
GGCGCTGGCGGCGCTGCGCAACCTGCTGGGGTACCAGGACCTGGGCCTGGCCTCGGACAT
GGTGGAGGCGGGCCTCAACAAGGTGGTGGTCACCCGCCAGATGCAGTCGTGGGGCGACGA
GGACGTGGTGGAGATGCTGACGTACGTGGACGAGAAGCTGAAGGAGGGCATCGTGTTCCT
CTCAAACTTTGACAAGTACAAGAAGGAGGTGCTGTCCAACACGCTGGACTGGAGCCCCAT
GCACACCAGCGACCTGTTCTGGCGCCAGAACGCGGAGAAGTTCGAGGAGCGCGACTTCCA
GGTGCTGCGCGTGCTGCTCAAGATCATCGAGACCAACCGCGACGTCAAGACGTTGGCGGT
GGGCTGCCACGACCTAGGCCAGTTCATCGTGTACCACCCCCAGGGCCGCTACATCGTGAA
CGACCTGCGCGGCAAGGAGCTGGTGATGCGGCTGCTGGGCCACAGCGACGTGGAGGTGCA
GAAGCAGGCGCTGCTGTGCGTGCAGAAGCTCATGCTGAGCAAGGACAAGCTGGACTTCAT
CAAGTCGTAGGCGGCCGATGCGGTGGAGCAGCCCTTGGCCTGGAAGGCACTGCTGGGACG
GACGGAGAAGGTGGACGCGGCAGCGGCGACGGCGTAGGGGCCATGCACGGGGCTTGCTGC
AGGGCCTTGTCGTCAGGCCACGCCCCGGCGCCGCAGTACTGGAGTATGGCGGCGGCCGGG
GAGGCCGGAGGCGGGAGCGGGCGCCTTCCAAGCAGAGGGCAATCGAGCGAGTGTGCATGA
GAGTGGGATCTGGGGAGTCAAGTGGGGAGTTTTGACCGGGGCGCGGGTTGGTGTGCTGGC
GCCAGCTGGCGCGCGCGTCGGGGCTTGCGGACATACAGCGCAGCATTGCGCATTGACAGG
TGACGGAAATCAAGAGATGGCGATAACAACCAAACTTGGCGCGCACGTGAGGAGGTCATA
GCACAAGAAGTGCAGACGCCAATCTACCGGCTGACTGAGTGTGAGCTGCGGGGGGAAGCA
CTGTAACGCCGGGATATG