Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_16s0100g00400.t01
CDS Infomation

cds chromosome:12X:16:15837953:15838931:-1 gene:VIT_16s0100g00400 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAGAACCTCGTGCTAACGTGCGCCCAAGTGACCAACCACCTCCTACTCCAAAAATC
GAAGTACCCGACTCTTCTCTCTCTATTGTGCCCCCACAAGACCTTTCTTCACCTCCTTCA
CATTCCTCCTCAACGCCCACATCTGCTCATCCCTCACCAAAAAATCTTCCCTCTCCGACT
CCCTTTTCTGGTCAAACCGCCGGGAGGCACCCTTTTTATAGGGGAATCCGGTGTCGAGGT
AATAAATGGGTATCGGAGATTCGAGAGCCGCGCAAAACTACTCGAATATGGCTCGGCACG
TACCCGACGCCTGAAATGGCGGCTACCGCCTATGATGTAGCAGCGCTGGCCTTAAAAGGC
ACTGATGCCACCTTGAATTTTCCCAACTCCGTTCTGTCATACCCTATCCCAAAGTCCACC
TCCGCAAGCGATATACGCGCGGCGGCAGCGAGGGCCGCTGAGGCTCAGCAAGCAAAGCCC
GAGAGTTCGGAGAGCCCAAACACCACCCAACCTAAAAAGGAGGAGACAACAGAATCCAGT
AGCTTGGCAGCGGGGGAGGATCAATTCATTGACGAAGAGGAGCTTCTGAACATGCCTAAT
CTATTGGTGGACATGGCCGAGGGAATGCTGGTTAGCCCGCCTAGACTCAAGTCCCAACCC
TCCGACGATTCCCCGGAGAATTCAGACAGTGATAGTCTATGGAGCTACACATAA

Peptide Sequence

PEP ID

VIT_16s0100g00400.t01
PEP Infomation

pep chromosome:12X:16:15837953:15838931:-1 gene:VIT_16s0100g00400 transcript:VIT_16s0100g00400.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEEPRANVRPSDQPPPTPKIEVPDSSLSIVPPQDLSSPPSHSSSTPTSAHPSPKNLPSPT
PFSGQTAGRHPFYRGIRCRGNKWVSEIREPRKTTRIWLGTYPTPEMAATAYDVAALALKG
TDATLNFPNSVLSYPIPKSTSASDIRAAAARAAEAQQAKPESSESPNTTQPKKEETTESS
SLAAGEDQFIDEEELLNMPNLLVDMAEGMLVSPPRLKSQPSDDSPENSDSDSLWSYT

Transcript Sequence

Transcript ID

VIT_16s0100g00400.t01
Transcript Infomation

cdna chromosome:12X:16:15837953:15838931:-1 gene:VIT_16s0100g00400 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TGAGTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCCCCCTCTCTCTATCTGAATTGCAA
TTTTTTTTTTTTTTTTAAATATGGAAGAACCTCGTGCTAACGTGCGCCCAAGTGACCAAC
CACCTCCTACTCCAAAAATCGAAGTACCCGACTCTTCTCTCTCTATTGTGCCCCCACAAG
ACCTTTCTTCACCTCCTTCACATTCCTCCTCAACGCCCACATCTGCTCATCCCTCACCAA
AAAATCTTCCCTCTCCGACTCCCTTTTCTGGTCAAACCGCCGGGAGGCACCCTTTTTATA
GGGGAATCCGGTGTCGAGGTAATAAATGGGTATCGGAGATTCGAGAGCCGCGCAAAACTA
CTCGAATATGGCTCGGCACGTACCCGACGCCTGAAATGGCGGCTACCGCCTATGATGTAG
CAGCGCTGGCCTTAAAAGGCACTGATGCCACCTTGAATTTTCCCAACTCCGTTCTGTCAT
ACCCTATCCCAAAGTCCACCTCCGCAAGCGATATACGCGCGGCGGCAGCGAGGGCCGCTG
AGGCTCAGCAAGCAAAGCCCGAGAGTTCGGAGAGCCCAAACACCACCCAACCTAAAAAGG
AGGAGACAACAGAATCCAGTAGCTTGGCAGCGGGGGAGGATCAATTCATTGACGAAGAGG
AGCTTCTGAACATGCCTAATCTATTGGTGGACATGGCCGAGGGAATGCTGGTTAGCCCGC
CTAGACTCAAGTCCCAACCCTCCGACGATTCCCCGGAGAATTCAGACAGTGATAGTCTAT
GGAGCTACACATAATCAAAGCCAGAAAGGTGGAGAAGCAGAACTGCCAGAACCATCATCA
TCATCATCATCATCAGGTAAAAGAATTAATATGGTAAATTTTCCACTTTGTTTGTGAGAT
TTGTTTTTGGATTTCCTTTTCTTTTTCCAACATTGATGTTGGGTTCCGAAGCTGATCGGG
TTGCAGAGATCCCAGTTAC