Sequence Name:Pfru_SekihoH2_1.0
Assembly Name | Pfru_SekihoH2_1.0 | Biological Sample | SekihoS8 (Red perilla) |
Number of Sequences | 20 | Number of Chromosomes | 2n = 4x = 40 |
Total Length (bp) | 1,231,843,663 | N50 Length (bp) | 63,607,629 |
Number of Genes | 62,895 | Number of Genes Source File | Pfru_SekihoH2_helixer.pep.fa |
Number of Genes Annotated by Hayai-annotation | 62,895 | Hayai-Annotation Version | zen_v2.0 |
Sequencing Method | PacBio Hifi | Read Depth | 29.1x |
Assembly Method | Hifiasm, Ragoo against Pfru_yukari_1.0 | Estimated Genome Size (Mb) | 1,250 |
Sequencing Method Comments | NA | Comments | NA |
Copyright information for the article | In preparation | Copyright information for the data / database | In preparation |
Corresponding author | Sachiko Isobe (Kazusa DNA Res Inst) | Data Source | Plant GARDEN |
DOI/PMID | Data Source URL | https://plantgarden.jp/ | |
BUSCO Version | NA | BUSCO Dataset | embryophyta_odb10 |
BUSCO Genome | C:99.4%[S:9.7%,D:89.7%],F:0.2%,M:0.4%,n:1614 | BUSCO Gene (pep/cds) | C:98.7%[S:9.7%,D:89.0%],F:0.7%,M:0.6%,n:1614 |