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アセンブル , シーケンス , Assemble , Sequence , Perilla frutescens , Perilla, Shiso, Egoma, Lemon egoma, Beefsteak plant , シソ, エゴマ, レモンエゴマ

Perilla frutescens

Genome Assembly ID:t48386.G002

Sequence Name:GCA_026008535.1_Pfru_yukari_1.0

Details of the Assembled Genome Sequences

Assembly Name GCA_026008535.1_Pfru_yukari_1.0 Biological Sample cv. Hoko-3 (Red perilla)
Number of Sequences 71 Number of Chromosomes 2n = 4x = 40
Total Length (bp) 1,258,994,547 N50 Length (bp) 63,334,402
Number of Genes 107,631 Number of Genes Source File yukari_merged_gff_Pfg.protein.fasta
Number of Genes Annotated by Hayai-annotation 107,631 Hayai-Annotation Version zen_v2.0
Sequencing Method PacBio, Omni-C Read Depth 57.5x(PacBio)
Assembly Method Hifiasm v0.16.1 Estimated Genome Size (Mb) NA
Sequencing Method Comments NA Comments NA
Copyright information for the article In preparation Copyright information for the data / database In preparation
Corresponding author Hidemasa Bono (Hiroshima University ) Data Source FigShare
DOI/PMID 10.1093/dnares/dsac044 Data Source URL https://figshare.com
BUSCO Version 5.8.2 BUSCO Dataset embryophyta_odb10
BUSCO Genome C:99.2%[S:2.4%,D:96.8%],F:0.4%,M:0.4%,n:1614 BUSCO Gene (pep/cds) C:96.4%[S:15.2%,D:81.2%],F:1.9%,M:1.7%,n:1614

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