Plant GARDEN How To ▶︎

JA

EN

Oryza sativa

Assembly Name:IRGSP-1.0

Gene File:Oryza_sativa.IRGSP-1.0.pep.all.fa.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Os12t0562400-00
PEP
Os12t0562400-00
Position on the Genome Chromosome 12
Start Position 23048705
End Position 23053244
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00077750
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Phosphoinositide phospholipase C
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Phosphoinositide phospholipase C
Accession
CrossRef Refseq from UniProt
NA
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF00168,PF00388,PF00387
Pfam Description Details
InterPro ID
IPR001192,IPR000008,IPR035892,IPR001711,IPR017946,IPR000909
InterPro Description Details
GO ID
GO:0016042,GO:0035556,GO:0005886,GO:0004435
GO Description Details
GOslim ID
GO:0016020,GO:0050789,GO:0016787,GO:0050896,GO:0007154,GO:0006629,GO:0005575
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Oryza sativa Indica Group
Family Poaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , subsp. japonica, cv. Nipponbare , Poaceae , イネ科 , Oryza , イネ属 , Rice, Indica rice, Japonica rice, Nagina-22, N22 , イネ, イネ インディカ亜種, イネ ジャポニカ亜種, イネaus亜種N22 Indica rice , イネ ジャポニカ亜種

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.