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Oryza sativa

Assembly Name:IRGSP-1.0

Gene File:Oryza_sativa.IRGSP-1.0.pep.all.fa.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Os12t0173366-01
PEP
Os12t0173366-01
Position on the Genome Chromosome 12
Start Position 3718814
End Position 3720267
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00039792
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Protein transport protein Sec61 subunit beta
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Protein transport protein Sec61 subunit beta
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
Pfam ID
PF03911
Pfam Description Details
InterPro ID
IPR030671,IPR016482
InterPro Description Details
GO ID
GO:0031204,GO:0005784,GO:0006616,GO:0016021,GO:0005086,GO:0031205
GO Description Details
GOslim ID
GO:0031205,GO:0005575,GO:0016020,GO:0065009,GO:0005515,GO:0051641,GO:0015031,GO:0071256
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Oryza sativa Japonica Group
Family Poaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , subsp. japonica, cv. Nipponbare , Poaceae , イネ科 , Oryza , イネ属 , Rice, Indica rice, Japonica rice, Nagina-22, N22 , イネ, イネ インディカ亜種, イネ ジャポニカ亜種, イネaus亜種N22 Indica rice , イネ ジャポニカ亜種

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.