Plant GARDEN How To ▶︎

JA

EN

Oryza sativa

Assembly Name:IRGSP-1.0

Gene File:Oryza_sativa.IRGSP-1.0.pep.all.fa.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Os08t0561700-01
PEP
Os08t0561700-01
Position on the Genome Chromosome 8
Start Position 28132469
End Position 28135505
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00039871
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Superoxide dismutase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Superoxide dismutase [Cu-Zn]
Accession
CrossRef Refseq from UniProt
NA
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF00080
Pfam Description Details
InterPro ID
IPR036423,IPR001424,IPR018152,IPR024134
InterPro Description Details
GO ID
GO:0071493,GO:0004784,GO:0071457,GO:0046688,GO:0009570,GO:0009579,GO:0071329,GO:0010039,GO:0035195,GO:0071472,GO:0048046,GO:0071484,GO:0046872
GO Description Details
GOslim ID
GO:0050896,GO:0016209,GO:0009536,GO:0043167,GO:0005576,GO:0009579,GO:0016458,GO:0016491
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Oryza nivara
Family Poaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , subsp. japonica, cv. Nipponbare , Poaceae , イネ科 , Oryza , イネ属 , Rice, Indica rice, Japonica rice, Nagina-22, N22 , イネ, イネ インディカ亜種, イネ ジャポニカ亜種, イネaus亜種N22 Indica rice , イネ ジャポニカ亜種

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.