Plant GARDEN How To ▶︎

JA

EN

Oryza sativa

Assembly Name:IRGSP-1.0

Gene File:Oryza_sativa.IRGSP-1.0.pep.all.fa.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Os08t0254500-02
PEP
Os08t0254500-02
Position on the Genome Chromosome 8
Start Position 9405709
End Position 9414700
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00724119
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
SecY/SEC61-alpha family
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Preprotein translocase subunit SECY, chloroplastic
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
Pfam ID
PF00344
Pfam Description Details
InterPro ID
IPR023201,IPR030659,IPR026593,IPR002208
InterPro Description Details
GO ID
GO:0005048,GO:0016021,GO:0009535,GO:0008320,GO:0006616
GO Description Details
GOslim ID
GO:0015031,GO:0005575,GO:0016020,GO:0051641,GO:0005215,GO:0009579,GO:0042277,GO:0009536
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Oryza sativa Japonica Group
Family Poaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , subsp. japonica, cv. Nipponbare , Poaceae , イネ科 , Oryza , イネ属 , Rice, Indica rice, Japonica rice, Nagina-22, N22 , イネ, イネ インディカ亜種, イネ ジャポニカ亜種, イネaus亜種N22 Indica rice , イネ ジャポニカ亜種

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.