Oryza sativaAssembly Name:IRGSP-1.0
Gene File:Oryza_sativa.IRGSP-1.0.pep.all.fa.gz
| Position on the Genome | Gene Name | CDS | Os08t0242800-02 |
| PEP | Os08t0242800-02 |
||
| Position on the Genome | Chromosome | 8 | |
| Start Position | 8678003 | ||
| End Position | 8681453 | ||
| Strand | + | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI00396042 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
||
| OrthoDB | Database version | 10.1 | |
| Description | RNA polymerase sigma-70 region 2 |
||
| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
|
| Protein name | RNA polymerase sigma factor |
||
| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | NA |
||
| KEGG entry | NA |
||
| KO ID | NA |
||
| Pfam ID | PF04542,PF04539,PF04545 |
||
| Pfam Description | Details | ||
| InterPro ID | IPR016262,IPR013325,IPR013324,IPR007630,IPR007624,IPR007627,IPR000943,IPR036388,IPR014284 |
||
| InterPro Description | Details | ||
| GO ID | GO:0071483,GO:0016987,GO:0006352,GO:0045893,GO:0003700,GO:0090351,GO:0003677,GO:0009507 |
||
| GO Description | Details | ||
| GOslim ID | GO:0006351,GO:0050789,GO:0005515,GO:0003676,GO:0065009,GO:0032502,GO:0050896,GO:0009536,GO:0032501 |
||
| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
||
| TF family Description | NA |
||
| Best hit taxonomy | Species | Oryza sativa Japonica Group | |
| Family | Poaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
