Plant GARDEN How To ▶︎

JA

EN

Oryza sativa

Assembly Name:IRGSP-1.0

Gene File:Oryza_sativa.IRGSP-1.0.pep.all.fa.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Os08t0189100-01
PEP
Os08t0189100-01
Position on the Genome Chromosome 8
Start Position 5208410
End Position 5209440
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00096735
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
RmlC-like cupin domain superfamily
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Germin-like protein 8-2
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00190
Pfam Description Details
InterPro ID
IPR001929,IPR011051,IPR006045,IPR019780,IPR014710
InterPro Description Details
GO ID
GO:0048046,GO:0030145,GO:0005618,GO:0045735
GO Description Details
GOslim ID
GO:0043167,GO:0005576,GO:0045735,GO:0005618
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Oryza sativa Japonica Group
Family Poaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , subsp. japonica, cv. Nipponbare , Poaceae , イネ科 , Oryza , イネ属 , Rice, Indica rice, Japonica rice, Nagina-22, N22 , イネ, イネ インディカ亜種, イネ ジャポニカ亜種, イネaus亜種N22 Indica rice , イネ ジャポニカ亜種

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.