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Oryza sativa

Assembly Name:IRGSP-1.0

Gene File:Oryza_sativa.IRGSP-1.0.pep.all.fa.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Os08t0120500-02
PEP
Os08t0120500-02
Position on the Genome Chromosome 8
Start Position 1121769
End Position 1125964
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00049824
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Initiation factor eIF-4 gamma, MA3
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Uncharacterized protein
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF02847
Pfam Description Details
InterPro ID
IPR016021,IPR003891,IPR039778,IPR016024
InterPro Description Details
GO ID
GO:0005737,GO:0006417,GO:0045892
GO Description Details
GOslim ID
GO:0005737,GO:0006351,GO:0050789
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Oryza rufipogon
Family Poaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , subsp. japonica, cv. Nipponbare , Poaceae , イネ科 , Oryza , イネ属 , Rice, Indica rice, Japonica rice, Nagina-22, N22 , イネ, イネ インディカ亜種, イネ ジャポニカ亜種, イネaus亜種N22 Indica rice , イネ ジャポニカ亜種

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Uncharacterized protein
OrthoDB(1 item)
35993at33090
Initiation factor eIF-4 gamma, MA3
Pfam(1 item)
 
MA3 domain
InterPro(4 items)
 
Initiation factor eIF-4 gamma, MA3
 
ARM-type_fold
Gene ontology(3 items)
BP
regulation of translation
BP
negative regulation of transcription, DNA-templated
GO slim(3 items)
BP
transcription, DNA-templated
BP
regulation of biological process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.