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Oryza sativa

Assembly Name:IRGSP-1.0

Gene File:Oryza_sativa.IRGSP-1.0.pep.all.fa.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Os07t0624700-01
PEP
Os07t0624700-01
Position on the Genome Chromosome 7
Start Position 25878568
End Position 25882402
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI01970245
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
UMP-CMP kinase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
UMP-CMP kinase
Accession
CrossRef Refseq from UniProt
NA
EC
KEGG entry
NA
KO ID
NA
Pfam ID
NA
Pfam Description
InterPro ID
IPR033690,IPR006266,IPR000850,IPR027417
InterPro Description Details
GO ID
GO:0004127,GO:0006221,GO:0006207,GO:0004017,GO:0009041,GO:0005524,GO:0005737,GO:0005634
GO Description Details
GOslim ID
GO:0009117,GO:0000166,GO:0043167,GO:0016740,GO:0005737,GO:0005634,GO:0006139
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Oryza sativa Japonica Group
Family Poaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , subsp. japonica, cv. Nipponbare , Poaceae , イネ科 , Oryza , イネ属 , Rice, Indica rice, Japonica rice, Nagina-22, N22 , イネ, イネ インディカ亜種, イネ ジャポニカ亜種, イネaus亜種N22 Indica rice , イネ ジャポニカ亜種

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
UMP-CMP kinase
OrthoDB(1 item)
193313at33090
UMP-CMP kinase
InterPro(4 items)
 
Adenylat_kinase_CS
 
UMP_CMP_kinase
 
Adenylat/UMP-CMP_kin
 
P-loop_NTPase
Gene ontology(8 items)
MF
cytidylate kinase activity
BP
pyrimidine nucleotide biosynthetic process
BP
'de novo' pyrimidine nucleobase biosynthetic process
MF
adenylate kinase activity
MF
uridylate kinase activity
GO slim(7 items)
BP
nucleotide metabolic process
MF
nucleotide binding
MF
transferase activity
BP
nucleobase-containing compound metabolic process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.