Plant GARDEN How To ▶︎

JA

EN

Oryza sativa

Assembly Name:IRGSP-1.0

Gene File:Oryza_sativa.IRGSP-1.0.pep.all.fa.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Os07t0170100-02
PEP
Os07t0170100-02
Position on the Genome Chromosome 7
Start Position 3718724
End Position 3722592
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00630574
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Transketolase, C-terminal domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Os07g0170100 protein
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
Pfam ID
PF02779,PF02780
Pfam Description Details
InterPro ID
IPR009014,IPR029061,IPR033248,IPR005475
InterPro Description Details
GO ID
GO:0009083,GO:0005947,GO:0005739,GO:0003826,GO:0007584
GO Description Details
GOslim ID
GO:0006520,GO:0050896,GO:0016491,GO:0045239,GO:0005739
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Oryza sativa Japonica Group
Family Poaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , subsp. japonica, cv. Nipponbare , Poaceae , イネ科 , Oryza , イネ属 , Rice, Indica rice, Japonica rice, Nagina-22, N22 , イネ, イネ インディカ亜種, イネ ジャポニカ亜種, イネaus亜種N22 Indica rice , イネ ジャポニカ亜種

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.