Plant GARDEN How To ▶︎

JA

EN

Oryza sativa

Assembly Name:IRGSP-1.0

Gene File:Oryza_sativa.IRGSP-1.0.pep.all.fa.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Os06t0693500-01
PEP
Os06t0693500-01
Position on the Genome Chromosome 6
Start Position 28954620
End Position 28957837
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00082940
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Zinc finger C2H2 superfamily
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Os06g0693500 protein
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
Pfam ID
PF12756
Pfam Description Details
InterPro ID
IPR013087,IPR040025,IPR041661,IPR036236
InterPro Description Details
GO ID
GO:0042273,GO:0030687
GO Description Details
GOslim ID
GO:0042254,GO:0030684
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Oryza sativa Japonica Group
Family Poaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , subsp. japonica, cv. Nipponbare , Poaceae , イネ科 , Oryza , イネ属 , Rice, Indica rice, Japonica rice, Nagina-22, N22 , イネ, イネ インディカ亜種, イネ ジャポニカ亜種, イネaus亜種N22 Indica rice , イネ ジャポニカ亜種

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.