Plant GARDEN How To ▶︎

JA

EN

Oryza sativa

Assembly Name:IRGSP-1.0

Gene File:Oryza_sativa.IRGSP-1.0.pep.all.fa.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Os06t0143000-01
PEP
Os06t0143000-01
Position on the Genome Chromosome 6
Start Position 2256869
End Position 2260898
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00075636
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Manganese/iron superoxide dismutase, C-terminal
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Superoxide dismutase [Fe] 2, chloroplastic
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
Pfam ID
PF02777,PF00081
Pfam Description Details
InterPro ID
IPR019833,IPR019831,IPR001189,IPR019832,IPR036314,IPR036324
InterPro Description Details
GO ID
GO:0004784,GO:0009579,GO:0046872,GO:0055114,GO:0042644
GO Description Details
GOslim ID
GO:0043232,GO:0009536,GO:0055114,GO:0043167,GO:0009579,GO:0016491,GO:0016209
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Oryza sativa Japonica Group
Family Poaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , subsp. japonica, cv. Nipponbare , Poaceae , イネ科 , Oryza , イネ属 , Rice, Indica rice, Japonica rice, Nagina-22, N22 , イネ, イネ インディカ亜種, イネ ジャポニカ亜種, イネaus亜種N22 Indica rice , イネ ジャポニカ亜種

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.