Oryza sativaAssembly Name:IRGSP-1.0
Gene File:Oryza_sativa.IRGSP-1.0.pep.all.fa.gz
| Position on the Genome | Gene Name | CDS | Os05t0564200-01 |
| PEP | Os05t0564200-01 |
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| Position on the Genome | Chromosome | 5 | |
| Start Position | 28080214 | ||
| End Position | 28082860 | ||
| Strand | + | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI00084397 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | RNA recognition motif domain |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | swissprot |
|
| Protein name | Splicing factor U2af small subunit B |
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| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | NA |
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| KEGG entry | |||
| KO ID | |||
| Pfam ID | PF00076,PF00642 |
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| Pfam Description | Details | ||
| InterPro ID | IPR000504,IPR009145,IPR012677,IPR000571,IPR035979 |
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| InterPro Description | Details | ||
| GO ID | GO:0030628,GO:0005681,GO:0003677,GO:0089701,GO:0046872,GO:0000398 |
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| GO Description | Details | ||
| GOslim ID | GO:0003676,GO:0032991,GO:0043167,GO:0000375,GO:0005681,GO:0005634 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Oryza sativa Japonica Group | |
| Family | Poaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
