Plant GARDEN How To ▶︎

JA

EN

Oryza sativa

Assembly Name:IRGSP-1.0

Gene File:Oryza_sativa.IRGSP-1.0.pep.all.fa.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Os05t0104800-01
PEP
Os05t0104800-01
Position on the Genome Chromosome 5
Start Position 260126
End Position 262272
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00027103
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Eukaryotic translation initiation factor 3 subunit F
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Eukaryotic translation initiation factor 3 subunit F
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
Pfam ID
PF13012,PF01398
Pfam Description Details
InterPro ID
IPR037518,IPR000555,IPR024969,IPR027531
InterPro Description Details
GO ID
GO:0001732,GO:0031369,GO:0009744,GO:0071541,GO:0005829,GO:0016282,GO:0006413,GO:0005634,GO:0009846,GO:0009793,GO:0003743,GO:0033290,GO:0070122,GO:0008237
GO Description Details
GOslim ID
GO:0015935,GO:0008233,GO:0032991,GO:0005737,GO:0005634,GO:0032502,GO:0005515,GO:0000003,GO:0051704,GO:0032501,GO:0050896,GO:0045182,GO:0065003,GO:0003676
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Oryza sativa Japonica Group
Family Poaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , subsp. japonica, cv. Nipponbare , Poaceae , イネ科 , Oryza , イネ属 , Rice, Indica rice, Japonica rice, Nagina-22, N22 , イネ, イネ インディカ亜種, イネ ジャポニカ亜種, イネaus亜種N22 Indica rice , イネ ジャポニカ亜種

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.