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Oryza sativa

Assembly Name:IRGSP-1.0

Gene File:Oryza_sativa.IRGSP-1.0.pep.all.fa.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Os04t0682000-01
PEP
Os04t0682000-01
Position on the Genome Chromosome 4
Start Position 34816665
End Position 34820086
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00038372
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Cysteine protease
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Cysteine protease ATG4B
Accession
CrossRef Refseq from UniProt
NA
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF03416
Pfam Description Details
InterPro ID
IPR005078,IPR038765
InterPro Description Details
GO ID
GO:0008234,GO:0015031,GO:0006914,GO:0005737
GO Description Details
GOslim ID
GO:0006914,GO:0015031,GO:0008233,GO:0005737
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Oryza sativa Indica Group
Family Poaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , subsp. japonica, cv. Nipponbare , Poaceae , イネ科 , Oryza , イネ属 , Rice, Indica rice, Japonica rice, Nagina-22, N22 , イネ, イネ インディカ亜種, イネ ジャポニカ亜種, イネaus亜種N22 Indica rice , イネ ジャポニカ亜種

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.