Plant GARDEN How To ▶︎

JA

EN

Oryza sativa

Assembly Name:IRGSP-1.0

Gene File:Oryza_sativa.IRGSP-1.0.pep.all.fa.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Os04t0558400-01
PEP
Os04t0558400-01
Position on the Genome Chromosome 4
Start Position 27984142
End Position 27990550
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00194909
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Acyl-CoA thioesterase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Os04g0558400 protein
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00027
Pfam Description Details
InterPro ID
IPR014710,IPR042171,IPR003703,IPR018490,IPR029069,IPR000595
InterPro Description Details
GO ID
GO:0009062,GO:0005829,GO:0006637,GO:0047617
GO Description Details
GOslim ID
GO:0006790,GO:0009117,GO:0005737,GO:0044255,GO:0016787,GO:0006082,GO:0043603
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Oryza sativa Japonica Group
Family Poaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , subsp. japonica, cv. Nipponbare , Poaceae , イネ科 , Oryza , イネ属 , Rice, Indica rice, Japonica rice, Nagina-22, N22 , イネ, イネ インディカ亜種, イネ ジャポニカ亜種, イネaus亜種N22 Indica rice , イネ ジャポニカ亜種

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.