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Oryza sativa

Assembly Name:IRGSP-1.0

Gene File:Oryza_sativa.IRGSP-1.0.pep.all.fa.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Os03t0837100-01
PEP
Os03t0837100-01
Position on the Genome Chromosome 3
Start Position 35177757
End Position 35183269
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI02223948
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Cellulose synthase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Cellulose synthase
Accession
CrossRef Refseq from UniProt
NA
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF03552,PF14569
Pfam Description Details
InterPro ID
IPR029044,IPR001841,IPR005150,IPR013083,IPR027934
InterPro Description Details
GO ID
GO:0046872,GO:0071555,GO:0016760,GO:0030244,GO:0005886,GO:0016021
GO Description Details
GOslim ID
GO:0016020,GO:0009059,GO:0043167,GO:0016740,GO:0071555,GO:0005976
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Oryza punctata
Family Poaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , subsp. japonica, cv. Nipponbare , Poaceae , イネ科 , Oryza , イネ属 , Rice, Indica rice, Japonica rice, Nagina-22, N22 , イネ, イネ インディカ亜種, イネ ジャポニカ亜種, イネaus亜種N22 Indica rice , イネ ジャポニカ亜種

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(2 items)
 
Cellulose synthase
OrthoDB(1 item)
7412at33090
Cellulose synthase
Pfam(2 items)
 
Cellulose synthase
 
Zinc-binding RING-finger
InterPro(5 items)
 
Nucleotide-diphossugar_trans
 
Zinc finger, RING-type
 
Cellulose synthase
 
Znf_RING/FYVE/PHD
 
Cellulose synthase, RING-type zinc finger
Gene ontology(6 items)
MF
metal ion binding
BP
cell wall organization
MF
cellulose synthase (UDP-forming) activity
BP
cellulose biosynthetic process
CC
plasma membrane
CC
integral component of membrane
GO slim(6 items)
BP
macromolecule biosynthetic process
MF
transferase activity
BP
cell wall organization
BP
polysaccharide metabolic process

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.