Plant GARDEN How To ▶︎

JA

EN

Oryza sativa

Assembly Name:IRGSP-1.0

Gene File:Oryza_sativa.IRGSP-1.0.pep.all.fa.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Os03t0625900-01
PEP
Os03t0625900-01
Position on the Genome Chromosome 3
Start Position 23817641
End Position 23824212
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00249238
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
WD40 repeat
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
U3 snoRNP-associated protein-like YAOH
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
Pfam ID
PF00400
Pfam Description Details
InterPro ID
IPR015943,IPR001680,IPR036322,IPR019775,IPR039241,IPR020472,IPR017986
InterPro Description Details
GO ID
GO:0034511,GO:0030515,GO:0005730,GO:0032040,GO:0006364
GO Description Details
GOslim ID
GO:0005730,GO:0030684,GO:0003676,GO:0042254,GO:0006396
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Oryza sativa Japonica Group
Family Poaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , subsp. japonica, cv. Nipponbare , Poaceae , イネ科 , Oryza , イネ属 , Rice, Indica rice, Japonica rice, Nagina-22, N22 , イネ, イネ インディカ亜種, イネ ジャポニカ亜種, イネaus亜種N22 Indica rice , イネ ジャポニカ亜種

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.