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Oryza sativa

Assembly Name:IRGSP-1.0

Gene File:Oryza_sativa.IRGSP-1.0.pep.all.fa.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Os03t0374575-01
PEP
Os03t0374575-01
Position on the Genome Chromosome 3
Start Position 14751365
End Position 14754907
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI04207328
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
RNA recognition motif domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Os03g0374575 protein
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00076
Pfam Description Details
InterPro ID
IPR012677,IPR035979,IPR000504
InterPro Description Details
GO ID
GO:0003723
GO Description Details
GOslim ID
GO:0003676
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Oryza sativa Japonica Group
Family Poaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , subsp. japonica, cv. Nipponbare , Poaceae , イネ科 , Oryza , イネ属 , Rice, Indica rice, Japonica rice, Nagina-22, N22 , イネ, イネ インディカ亜種, イネ ジャポニカ亜種, イネaus亜種N22 Indica rice , イネ ジャポニカ亜種

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Os03g0374575 protein
OrthoDB(1 item)
219571at33090
RNA recognition motif domain
Pfam(1 item)
 
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
InterPro(3 items)
 
Nucleotide-bd_a/b_plait_sf
 
RBD_domain_sf
 
RNA recognition motif domain
Gene ontology(1 item)
GO slim(1 item)
MF
nucleic acid binding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.