Plant GARDEN How To ▶︎

JA

EN

Oryza sativa

Assembly Name:IRGSP-1.0

Gene File:Oryza_sativa.IRGSP-1.0.pep.all.fa.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Os03t0172000-02
PEP
Os03t0172000-02
Position on the Genome Chromosome 3
Start Position 3860925
End Position 3864548
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00135902
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Peptidase S59, nucleoporin
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Peptidase S59 domain-containing protein
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF04096,PF12110
Pfam Description Details
InterPro ID
IPR007230,IPR037665,IPR036903,IPR021967
InterPro Description Details
GO ID
GO:0015031,GO:0031965,GO:0009870,GO:0051028,GO:0017056,GO:0005643,GO:0009733,GO:0048574
GO Description Details
GOslim ID
GO:0015031,GO:0015931,GO:0006810,GO:0005773,GO:0032501,GO:0005634,GO:0005643,GO:0016020,GO:0005198,GO:0032502,GO:0050896,GO:0051641,GO:0000003
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Oryza sativa Indica Group
Family Poaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , subsp. japonica, cv. Nipponbare , Poaceae , イネ科 , Oryza , イネ属 , Rice, Indica rice, Japonica rice, Nagina-22, N22 , イネ, イネ インディカ亜種, イネ ジャポニカ亜種, イネaus亜種N22 Indica rice , イネ ジャポニカ亜種

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.