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Oryza sativa

Assembly Name:IRGSP-1.0

Gene File:Oryza_sativa.IRGSP-1.0.pep.all.fa.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Os02t0709400-02
PEP
Os02t0709400-02
Position on the Genome Chromosome 2
Start Position 29341302
End Position 29353549
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00392003
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Peptidase C2, calpain, catalytic domain
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Calpain-type cysteine protease ADL1
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF01067,PF00648
Pfam Description Details
InterPro ID
IPR036213,IPR013320,IPR001300,IPR022682,IPR000169,IPR022683,IPR038765,IPR022684
InterPro Description Details
GO ID
GO:0009934,GO:0090628,GO:2000014,GO:0097264,GO:2000011,GO:2000024,GO:0042127,GO:0006508,GO:0009793,GO:0004198,GO:0005887,GO:0010008,GO:0008234,GO:0005737,GO:0005789,GO:0001558
GO Description Details
GOslim ID
GO:0032502,GO:0050789,GO:0016020,GO:0006508,GO:0032501,GO:0005737,GO:0008233,GO:0016049,GO:0000003,GO:0005783,GO:0005768,GO:0016043,GO:0008283
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Oryza sativa Japonica Group
Family Poaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , subsp. japonica, cv. Nipponbare , Poaceae , イネ科 , Oryza , イネ属 , Rice, Indica rice, Japonica rice, Nagina-22, N22 , イネ, イネ インディカ亜種, イネ ジャポニカ亜種, イネaus亜種N22 Indica rice , イネ ジャポニカ亜種

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.