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Oryza sativa

Assembly Name:IRGSP-1.0

Gene File:Oryza_sativa.IRGSP-1.0.pep.all.fa.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Os02t0552600-00
PEP
Os02t0552600-00
Position on the Genome Chromosome 2
Start Position 20842399
End Position 20844674
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI02832444
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-uniprot
OrthoDB Database version 10.1
Description
DNA glycosylase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
DNA-(apurinic or apyrimidinic site) lyase
Accession
CrossRef Refseq from UniProt
EC
KEGG entry
KO ID
Pfam ID
PF00730,PF07934
Pfam Description Details
InterPro ID
IPR012904,IPR023170,IPR011257,IPR003265
InterPro Description Details
GO ID
GO:0140078,GO:0003684,GO:0034039,GO:0005634,GO:0006289,GO:0006285
GO Description Details
GOslim ID
GO:0006281,GO:0005634,GO:0016787,GO:0003676,GO:0016829
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Oryza sativa Japonica Group
Family Poaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , subsp. japonica, cv. Nipponbare , Poaceae , イネ科 , Oryza , イネ属 , Rice, Indica rice, Japonica rice, Nagina-22, N22 , イネ, イネ インディカ亜種, イネ ジャポニカ亜種, イネaus亜種N22 Indica rice , イネ ジャポニカ亜種

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.