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Oryza sativa

Assembly Name:IRGSP-1.0

Gene File:Oryza_sativa.IRGSP-1.0.pep.all.fa.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Os02t0319100-01
PEP
Os02t0319100-01
Position on the Genome Chromosome 2
Start Position 12720938
End Position 12728873
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00120671
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
MEI2-like, RNA recognition motif 1
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Uncharacterized protein
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF04059,PF00076
Pfam Description Details
InterPro ID
IPR000504,IPR034454,IPR034453,IPR035979,IPR007201,IPR012677
InterPro Description Details
GO ID
GO:0003723
GO Description Details
GOslim ID
GO:0003676
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Oryza rufipogon
Family Poaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , subsp. japonica, cv. Nipponbare , Poaceae , イネ科 , Oryza , イネ属 , Rice, Indica rice, Japonica rice, Nagina-22, N22 , イネ, イネ インディカ亜種, イネ ジャポニカ亜種, イネaus亜種N22 Indica rice , イネ ジャポニカ亜種

Annotation Details

ID
Group/Domain
Name
Link
Source Annotation(1 item)
 
Uncharacterized protein
OrthoDB(1 item)
13745at33090
MEI2-like, RNA recognition motif 1
Pfam(2 items)
 
RNA recognition motif 2
 
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
InterPro(6 items)
 
RNA recognition motif domain
 
MEI2-like_RRM3
 
MEI2-like_RRM1
 
RBD_domain_sf
 
Mei2/Mei2-like, C-terminal RNA recognition motif
 
Nucleotide-bd_a/b_plait_sf
Gene ontology(1 item)
GO slim(1 item)
MF
nucleic acid binding

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.