Plant GARDEN How To ▶︎

JA

EN

Oryza sativa

Assembly Name:IRGSP-1.0

Gene File:Oryza_sativa.IRGSP-1.0.pep.all.fa.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Os01t0952100-00
PEP
Os01t0952100-00
Position on the Genome Chromosome 1
Start Position 41917701
End Position 41919058
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00102643
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
RmlC-like cupin domain superfamily
Gene ID
Ortholog group unique ID
Functional annotation Source DB
swissprot
Protein name
Germin-like protein 1-4
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF00190
Pfam Description Details
InterPro ID
IPR006045,IPR011051,IPR014710,IPR019780,IPR001929
InterPro Description Details
GO ID
GO:0045735,GO:0010497,GO:0048046,GO:0030145,GO:0005618,GO:2000280,GO:0009506
GO Description Details
GOslim ID
GO:0055044,GO:0005576,GO:0005618,GO:0043167,GO:0032502,GO:0045735,GO:0006810,GO:0032501,GO:0050789
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Oryza sativa Japonica Group
Family Poaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , subsp. japonica, cv. Nipponbare , Poaceae , イネ科 , Oryza , イネ属 , Rice, Indica rice, Japonica rice, Nagina-22, N22 , イネ, イネ インディカ亜種, イネ ジャポニカ亜種, イネaus亜種N22 Indica rice , イネ ジャポニカ亜種

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.