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Oryza sativa

Assembly Name:IRGSP-1.0

Gene File:Oryza_sativa.IRGSP-1.0.pep.all.fa.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Os01t0813500-01
PEP
Os01t0813500-01
Position on the Genome Chromosome 1
Start Position 34583893
End Position 34587110
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00069840
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Winged helix-like DNA-binding domain superfamily
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Vacuolar protein-sorting-associated protein 36
Accession
CrossRef Refseq from UniProt
EC
NA
KEGG entry
KO ID
Pfam ID
PF04157
Pfam Description Details
InterPro ID
IPR011993,IPR040608,IPR037855,IPR021648,IPR036388,IPR036390
InterPro Description Details
GO ID
GO:0032266,GO:0043130,GO:0000814,GO:0032509
GO Description Details
GOslim ID
GO:0008289,GO:0016192,GO:0051641,GO:0043167,GO:0005575,GO:0005515,GO:0032991,GO:0005768
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Oryza sativa Japonica Group
Family Poaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , subsp. japonica, cv. Nipponbare , Poaceae , イネ科 , Oryza , イネ属 , Rice, Indica rice, Japonica rice, Nagina-22, N22 , イネ, イネ インディカ亜種, イネ ジャポニカ亜種, イネaus亜種N22 Indica rice , イネ ジャポニカ亜種

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.