Plant GARDEN How To ▶︎

JA

EN

Oryza sativa

Assembly Name:IRGSP-1.0

Gene File:Oryza_sativa.IRGSP-1.0.pep.all.fa.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
Os01t0654500-01
PEP
Os01t0654500-01
Position on the Genome Chromosome 1
Start Position 26533072
End Position 26537108
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI03024462
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Isocitrate dehydrogenase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Isocitrate dehydrogenase [NADP]
Accession
CrossRef Refseq from UniProt
NA
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF00180
Pfam Description Details
InterPro ID
IPR004790,IPR024084,IPR019818
InterPro Description Details
GO ID
GO:0000287,GO:0004450,GO:0006099,GO:0006102,GO:0051287
GO Description Details
GOslim ID
GO:0006066,GO:0000166,GO:0044238,GO:0045333,GO:0016491,GO:0043167,GO:0006082
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Oryza punctata
Family Poaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , subsp. japonica, cv. Nipponbare , Poaceae , イネ科 , Oryza , イネ属 , Rice, Indica rice, Japonica rice, Nagina-22, N22 , イネ, イネ インディカ亜種, イネ ジャポニカ亜種, イネaus亜種N22 Indica rice , イネ ジャポニカ亜種

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.