Solanum tuberosumAssembly Name:DM_v4.03
Gene File:Stuberosum_448_v4.03.protein.fa.gz
| Position on the Genome | Gene Name | CDS | PGSC0003DMT400084297 |
| PEP | PGSC0003DMP400056322 |
||
| Position on the Genome | Chromosome | ST4.03ch05 | |
| Start Position | 17769678 | ||
| End Position | 17773971 | ||
| Strand | - | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI01336370 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
||
| OrthoDB | Database version | 10.1 | |
| Description | Zinc finger, RING-type |
||
| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
|
| Protein name | RING-type E3 ubiquitin transferase |
||
| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | |||
| KEGG entry | |||
| KO ID | NA |
||
| Pfam ID | PF13445,PF02182 |
||
| Pfam Description | Details | ||
| InterPro ID | IPR011011,IPR019787,IPR027370,IPR036987,IPR001965,IPR003105,IPR015947,IPR019786,IPR001841,IPR017907,IPR013083 |
||
| InterPro Description | Details | ||
| GO ID | GO:0046872,GO:0003677,GO:0010216,GO:0016567,GO:0005720,GO:0061630,GO:0006325 |
||
| GO Description | Details | ||
| GOslim ID | GO:0005634,GO:0019787,GO:0003676,GO:0005694,GO:0006304,GO:0043167,GO:0006464,GO:0051276 |
||
| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
||
| TF family Description | NA |
||
| Best hit taxonomy | Species | Solanum tuberosum | |
| Family | Solanaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | sot:102578387 | ||
