Solanum tuberosumAssembly Name:DM_v4.03
Gene File:Stuberosum_448_v4.03.protein.fa.gz
| Position on the Genome | Gene Name | CDS | PGSC0003DMT400065483 |
| PEP | PGSC0003DMP400044167 |
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| Position on the Genome | Chromosome | ST4.03ch08 | |
| Start Position | 37421078 | ||
| End Position | 37426383 | ||
| Strand | + | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI00680297 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | RNA polymerase sigma-70 region 2 |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
|
| Protein name | RNA polymerase sigma factor rpoD |
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| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | NA |
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| KEGG entry | |||
| KO ID | NA |
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| Pfam ID | PF04539,PF04545,PF04542 |
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| Pfam Description | Details | ||
| InterPro ID | IPR007624,IPR013324,IPR000943,IPR007627,IPR013325,IPR007630,IPR036388,IPR014284 |
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| InterPro Description | Details | ||
| GO ID | GO:0006352,GO:0016987,GO:0003700,GO:0003677 |
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| GO Description | Details | ||
| GOslim ID | GO:0065009,GO:0003676,GO:0006351,GO:0005515,GO:0050789 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Solanum tuberosum | |
| Family | Solanaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | sot:102599083 | ||
