Solanum tuberosumAssembly Name:DM_v4.03
Gene File:Stuberosum_448_v4.03.protein.fa.gz
| Position on the Genome | Gene Name | CDS | PGSC0003DMT400052558 |
| PEP | PGSC0003DMP400035430 |
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| Position on the Genome | Chromosome | ST4.03ch12 | |
| Start Position | 12551331 | ||
| End Position | 12553966 | ||
| Strand | + | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI01212075 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | Pectin lyase fold |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
|
| Protein name | Polygalacturonase 1 |
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| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | NA |
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| KEGG entry | |||
| KO ID | NA |
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| Pfam ID | PF00295 |
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| Pfam Description | Details | ||
| InterPro ID | IPR000743,IPR012334,IPR011050,IPR006626 |
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| InterPro Description | Details | ||
| GO ID | GO:0005975,GO:0004650,GO:0005618 |
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| GO Description | Details | ||
| GOslim ID | GO:0005975,GO:0005618,GO:0016787 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
||
| TF family Description | NA |
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| Best hit taxonomy | Species | Solanum tuberosum | |
| Family | Solanaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | sot:102582315 | ||
