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Solanum tuberosum

Assembly Name:DM_v4.03

Gene File:Stuberosum_448_v4.03.protein.fa.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
PGSC0003DMT400052338
PEP
PGSC0003DMP400035279
Position on the Genome Chromosome ST4.03ch09
Start Position 317944
End Position 324737
Strand +
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI00108029
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Putative tRNA (cytidine(32)/guanosine(34)-2-O)-methyltransferase
Accession
CrossRef Refseq from UniProt
NA
EC
KEGG entry
NA
KO ID
NA
Pfam ID
PF01728
Pfam Description Details
InterPro ID
IPR028590,IPR002877,IPR029063,IPR015507
InterPro Description Details
GO ID
GO:0005737,GO:0008175,GO:0002128,GO:0002181
GO Description Details
GOslim ID
GO:0006396,GO:0043412,GO:0016740,GO:0005737
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Solanum chacoense
Family Solanaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , DM1-3 516 R44 , Solanaceae , ナス科 , Solanum , ナス属 , Potato , ジャガイモ Potato , ジャガイモ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.