Solanum tuberosumAssembly Name:DM_v4.03
Gene File:Stuberosum_448_v4.03.protein.fa.gz
| Position on the Genome | Gene Name | CDS | PGSC0003DMT400038153 |
| PEP | PGSC0003DMP400025927 |
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| Position on the Genome | Chromosome | ST4.03ch06 | |
| Start Position | 1816922 | ||
| End Position | 1823999 | ||
| Strand | + | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI01952669 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | Zinc finger, RING-type |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
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| Protein name | RING-type E3 ubiquitin transferase BRCA1 |
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| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | NA |
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| KEGG entry | |||
| KO ID | NA |
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| Pfam ID | PF00533,PF00097 |
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| Pfam Description | Details | ||
| InterPro ID | IPR001357,IPR018957,IPR036420,IPR013083,IPR001841,IPR017907,IPR031099,IPR034732 |
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| InterPro Description | Details | ||
| GO ID | GO:0005694,GO:0010492,GO:0007049,GO:0004842,GO:0048366,GO:0003677,GO:0010078,GO:0045892,GO:0070531,GO:0009934,GO:0005886,GO:0046872,GO:0071158,GO:0080182,GO:0000724,GO:0035066,GO:0045717,GO:0031436,GO:0045944,GO:0065004,GO:0035067 |
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| GO Description | Details | ||
| GOslim ID | GO:0042180,GO:0050789,GO:0003676,GO:0032502,GO:0006464,GO:0051276,GO:0000151,GO:0032991,GO:0006082,GO:0007049,GO:0006351,GO:0065003,GO:0032501,GO:0016020,GO:0019787,GO:0043167,GO:0005634,GO:0006281,GO:0044255,GO:0005694 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Solanum tuberosum | |
| Family | Solanaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | sot:102589099 | ||
