Solanum tuberosumAssembly Name:DM_v4.03
Gene File:Stuberosum_448_v4.03.protein.fa.gz
| Position on the Genome | Gene Name | CDS | PGSC0003DMT400029648 |
| PEP | PGSC0003DMP400020192 |
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| Position on the Genome | Chromosome | ST4.03ch09 | |
| Start Position | 52575767 | ||
| End Position | 52579980 | ||
| Strand | - | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI00675365 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | Zinc finger, RING-type |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
|
| Protein name | RING-type E3 ubiquitin transferase |
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| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | |||
| KEGG entry | |||
| KO ID | NA |
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| Pfam ID | NA |
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| Pfam Description | |||
| InterPro ID | IPR017907,IPR033326,IPR004331,IPR001841,IPR013083 |
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| InterPro Description | Details | ||
| GO ID | GO:0080021,GO:0010167,GO:0004842,GO:0005634,GO:0042742,GO:0009626,GO:0005886,GO:0009627,GO:0009697,GO:0010337,GO:0009751 |
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| GO Description | Details | ||
| GOslim ID | GO:0050896,GO:0006725,GO:0005634,GO:0006464,GO:0006082,GO:0050789,GO:0016020,GO:0044419,GO:0002376,GO:0019787,GO:0042180 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Solanum tuberosum | |
| Family | Solanaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | sot:102594612 | ||
