Solanum tuberosumAssembly Name:DM_v4.03
Gene File:Stuberosum_448_v4.03.protein.fa.gz
| Position on the Genome | Gene Name | CDS | PGSC0003DMT400023994 |
| PEP | PGSC0003DMP400016369 |
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| Position on the Genome | Chromosome | ST4.03ch11 | |
| Start Position | 14012219 | ||
| End Position | 14019648 | ||
| Strand | - | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI01949137 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | Ribosomal RNA methyltransferase, Spb1, C-terminal |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
|
| Protein name | Putative rRNA methyltransferase |
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| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | |||
| KEGG entry | |||
| KO ID | NA |
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| Pfam ID | PF01728,PF11861,PF07780 |
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| Pfam Description | Details | ||
| InterPro ID | IPR028589,IPR029063,IPR024576,IPR012920,IPR015507,IPR002877 |
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| InterPro Description | Details | ||
| GO ID | GO:0000453,GO:0008173,GO:0031167,GO:0005730,GO:0001510,GO:0016435,GO:0008650,GO:0000463,GO:0000466,GO:0030687 |
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| GO Description | Details | ||
| GOslim ID | GO:0016740,GO:0042254,GO:0006396,GO:0043412,GO:0005730,GO:0030684,GO:0016070 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Solanum tuberosum | |
| Family | Solanaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | sot:107061167 | ||
