Plant GARDEN How To ▶︎

JA

EN

Solanum tuberosum

Assembly Name:DM_v4.03

Gene File:Stuberosum_448_v4.03.protein.fa.gz

Detail of the Gene Sequence

Position on the Genome Gene Name CDS
PGSC0003DMT400013515
PEP
PGSC0003DMP400009369
Position on the Genome Chromosome ST4.03ch05
Start Position 42205702
End Position 42207858
Strand -
Annotation
(Hayai Annotation ZEN)
KusakiDB KusakiDB Accession
KUNI03922908
KusakiDB version 2
Evidence is present Yes
Databases intersection (the sequence exists in multiple databases)
orthodb-refseq-uniprot
OrthoDB Database version 10.1
Description
NIF system FeS cluster assembly, NifU, C-terminal
Gene ID
Ortholog group unique ID
Functional annotation Source DB
trembl
Protein name
Nitrogen fixation protein nifU
Accession
CrossRef Refseq from UniProt
NA
EC
NA
KEGG entry
NA
KO ID
NA
Pfam ID
PF01106
Pfam Description Details
InterPro ID
IPR001075,IPR034904
InterPro Description Details
GO ID
GO:0005506,GO:0009570,GO:0016226,GO:0097428,GO:0005739,GO:0051539
GO Description Details
GOslim ID
GO:0005739,GO:0051604,GO:0043167,GO:0009536,GO:0051540,GO:0022607,GO:0006790
GO slim Description Details
Transcription Factor (TF) family 
NA
TF family Description
NA
Best hit taxonomy Species Solanum tuberosum
Family Solanaceae
Phylum Streptophyta
Superkingdom Eukaryota
Comments
gene , 遺伝子 , DM1-3 516 R44 , Solanaceae , ナス科 , Solanum , ナス属 , Potato , ジャガイモ Potato , ジャガイモ

Annotation Details

Similar Gene Sequences in Other Species

Sequences, which showing significant similarity, in other species, have not been registered.