Solanum tuberosumAssembly Name:DM_v4.03
Gene File:Stuberosum_448_v4.03.protein.fa.gz
| Position on the Genome | Gene Name | CDS | PGSC0003DMT400012424 |
| PEP | PGSC0003DMP400008632 |
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| Position on the Genome | Chromosome | ST4.03ch06 | |
| Start Position | 48467549 | ||
| End Position | 48471796 | ||
| Strand | - | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KUNI00038179 |
|---|---|---|---|
| KusakiDB version | 2 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | LSM domain, eukaryotic/archaea-type |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | trembl |
|
| Protein name | U6 snRNA-associated Sm-like protein LSm1 |
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| Accession | |||
| CrossRef Refseq from UniProt | |||
| EC | NA |
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| KEGG entry | |||
| KO ID | NA |
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| Pfam ID | PF01423 |
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| Pfam Description | Details | ||
| InterPro ID | IPR001163,IPR010920,IPR034104 |
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| InterPro Description | Details | ||
| GO ID | GO:0000339,GO:0016070,GO:1990726,GO:0000290,GO:0000932,GO:0003723,GO:0006397 |
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| GO Description | Details | ||
| GOslim ID | GO:0006396,GO:0043232,GO:0016070,GO:0009057,GO:0005737,GO:0032991,GO:0003676,GO:0050789 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
||
| TF family Description | NA |
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| Best hit taxonomy | Species | Solanum tuberosum | |
| Family | Solanaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | sot:102596351 | ||
